##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935743.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 852529 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.14080224836926 33.0 31.0 34.0 30.0 34.0 2 32.187377790081044 33.0 31.0 34.0 30.0 34.0 3 32.19658920693607 34.0 31.0 34.0 30.0 34.0 4 35.85395335525243 37.0 35.0 37.0 35.0 37.0 5 34.946327925501656 37.0 35.0 37.0 33.0 37.0 6 35.3964674515471 37.0 35.0 37.0 33.0 37.0 7 35.92536558873657 37.0 35.0 37.0 35.0 37.0 8 35.90793861557788 37.0 35.0 37.0 35.0 37.0 9 37.733720495138584 39.0 38.0 39.0 35.0 39.0 10 37.44265473667171 39.0 37.0 39.0 35.0 39.0 11 37.38074599221844 39.0 37.0 39.0 35.0 39.0 12 37.33209896672137 39.0 37.0 39.0 35.0 39.0 13 37.273052294995246 39.0 37.0 39.0 34.0 39.0 14 38.409993091144116 40.0 38.0 41.0 34.0 41.0 15 38.501684986669076 40.0 38.0 41.0 34.0 41.0 16 38.51922808490972 40.0 38.0 41.0 34.0 41.0 17 38.480403599173755 40.0 38.0 41.0 34.0 41.0 18 38.41338652409478 40.0 38.0 41.0 34.0 41.0 19 38.3059250770355 40.0 37.0 41.0 34.0 41.0 20 38.255187800063105 40.0 37.0 41.0 34.0 41.0 21 38.18508578593807 40.0 37.0 41.0 34.0 41.0 22 38.23877428216518 40.0 37.0 41.0 34.0 41.0 23 38.20973831975217 40.0 37.0 41.0 34.0 41.0 24 38.18672209391117 40.0 37.0 41.0 34.0 41.0 25 38.02299393920911 40.0 36.0 41.0 34.0 41.0 26 38.039965795884946 40.0 36.0 41.0 34.0 41.0 27 38.03674009916378 40.0 36.0 41.0 34.0 41.0 28 37.87945395405904 40.0 36.0 41.0 34.0 41.0 29 37.82529509260095 40.0 36.0 41.0 33.0 41.0 30 37.6863696132331 40.0 36.0 41.0 33.0 41.0 31 37.60853531082227 40.0 36.0 41.0 33.0 41.0 32 37.497450526609654 40.0 36.0 41.0 33.0 41.0 33 37.316834969836805 40.0 36.0 41.0 33.0 41.0 34 37.17469200461216 40.0 35.0 41.0 32.0 41.0 35 37.06832494847683 40.0 35.0 41.0 32.0 41.0 36 36.95981368375738 40.0 35.0 41.0 31.0 41.0 37 36.90387071876734 40.0 35.0 41.0 31.0 41.0 38 36.81286618988914 40.0 35.0 41.0 31.0 41.0 39 36.7325428225902 39.0 35.0 41.0 31.0 41.0 40 36.61105370022603 39.0 35.0 41.0 31.0 41.0 41 36.4820692316625 39.0 35.0 41.0 30.0 41.0 42 36.49892027133388 39.0 35.0 41.0 30.0 41.0 43 36.39134739111514 39.0 35.0 41.0 30.0 41.0 44 36.290875735605475 39.0 35.0 41.0 30.0 41.0 45 36.23207421683016 39.0 35.0 41.0 30.0 41.0 46 36.122327803511666 39.0 35.0 41.0 30.0 41.0 47 36.009326368956366 39.0 35.0 41.0 30.0 41.0 48 35.95185266424954 38.0 35.0 41.0 30.0 41.0 49 35.91850599803643 38.0 35.0 40.0 30.0 41.0 50 35.79549903874238 38.0 35.0 40.0 29.0 41.0 51 34.60265750490599 37.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 7.0 9 13.0 10 19.0 11 25.0 12 28.0 13 24.0 14 37.0 15 37.0 16 61.0 17 119.0 18 213.0 19 462.0 20 827.0 21 1465.0 22 2066.0 23 2957.0 24 4168.0 25 6211.0 26 8016.0 27 9049.0 28 9667.0 29 10499.0 30 11897.0 31 15379.0 32 19998.0 33 27663.0 34 49457.0 35 62394.0 36 63023.0 37 92274.0 38 160032.0 39 294193.0 40 247.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.64057762257941 17.25689096793188 20.8009346309627 20.30159677852601 2 30.686463451683167 26.353707615811313 25.712321809580672 17.24750712292485 3 30.42641364692579 25.098618346120777 27.996232386229675 16.478735620723754 4 27.343351369865427 25.255797749988563 29.302346313145943 18.098504567000067 5 24.869769826011783 29.74936922966843 26.597570287931553 18.78329065638823 6 25.702116878135524 33.73339792546646 25.83395990048432 14.730525295913688 7 77.68556846746563 5.648019011669985 11.931910820628975 4.734501700235418 8 78.75286353895292 5.816341731483621 10.442811916075582 4.98798281348787 9 72.23578318156919 6.759418154690339 12.891526270660588 8.113272393079884 10 37.97348829189388 27.01210164111719 19.336702915677943 15.677707151310983 11 28.454164022572837 25.399839770846505 27.299012702207197 18.84698350437346 12 25.55033318514678 21.640436864904302 32.19726249781532 20.61196745213359 13 24.63024718220729 22.692717784380356 33.94324415943622 18.733790873976133 14 21.007261923054816 26.51980167243578 31.39072101946092 21.082215385048485 15 19.409310416419853 24.15777058610323 35.96816061389114 20.464758383585778 16 22.968720125649686 24.519048618873963 30.930326123803415 21.58190513167294 17 23.164842486296656 24.444798945255823 29.352197989745804 23.03816057870172 18 24.013728565245287 23.698783267196777 30.733969167031265 21.55351900052667 19 23.743473829042767 26.50291075142312 27.988021521848523 21.76559389768559 20 24.336063641236837 25.474206742527233 28.919016244608684 21.270713371627238 21 24.139237492214342 27.026529302815504 29.2019391715707 19.63229403339945 22 22.92919067855756 24.018303189686215 29.313255032966623 23.7392510987896 23 21.836559225551273 25.477021896029346 29.87018623413397 22.816232644285414 24 21.94505993344508 24.542273635266366 30.422660108922983 23.09000632236557 25 22.668319787362073 26.970578126961076 28.079279414541908 22.28182267113494 26 21.66401377548447 25.24371604954201 28.82435670810025 24.267913466873267 27 22.289329747140567 24.896631082344413 29.044407873515155 23.76963129699987 28 21.41299592154636 25.256618836426682 30.048596587330167 23.281788654696793 29 22.085348416300207 24.762324800681267 29.67066222967195 23.481664553346572 30 22.760281468430986 25.349636200058885 30.543711709513694 21.346370621996435 31 24.927949665055383 25.1488219169084 27.755419463736718 22.1678089542995 32 25.04782828502022 25.351864863248053 27.239894478662897 22.360412373068833 33 23.66898955929945 25.280899535382375 27.478244141841508 23.571866763476667 34 24.209968223954846 24.20515900338874 29.619754870508803 21.96511790214761 35 23.958363879703796 25.840059399738895 28.1530598959097 22.048516824647606 36 25.07938146385636 26.78067256363127 27.727150630653036 20.41279534185934 37 23.71238984245697 27.656537196975115 27.446573664942775 21.184499295625134 38 24.016661016809984 26.597452989868962 27.841985433926585 21.543900559394462 39 23.760599346180598 25.65590144147589 27.22464573052647 23.35885348181704 40 25.273744353564513 23.872149803701692 29.851653140245084 21.002452702488714 41 23.007193890178517 25.486757635224137 28.21112243689071 23.294926037706635 42 22.93704964875095 25.810265691841565 28.659787526289428 22.592897133118054 43 22.65846675010469 25.242777665041306 28.927461705115014 23.17129387973899 44 23.19909352057232 24.350608600997738 28.852039050871 23.598258827558947 45 22.033619970698943 23.846109633807178 28.545304617203637 25.574965778290238 46 23.664180338733345 24.84032801230222 28.203732658947672 23.29175899001676 47 21.77028582018911 24.513770206057504 30.670393617108626 23.04555035664476 48 21.7897572985787 24.952347662073667 29.324984839225408 23.932910200122222 49 22.610491842506235 23.77209455631421 30.369406788508073 23.248006812671477 50 21.82318724641625 23.754147952738265 30.95906414913745 23.463600651708035 51 21.443610715881807 23.451401653198893 29.52720669912695 25.577780931792347 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 266.0 1 957.5 2 1649.0 3 5061.0 4 8473.0 5 5629.5 6 2786.0 7 2780.0 8 2774.0 9 2797.0 10 2820.0 11 2798.5 12 2777.0 13 2715.5 14 2654.0 15 2619.0 16 2584.0 17 2528.0 18 2472.0 19 2515.5 20 2559.0 21 2799.0 22 3039.0 23 3292.5 24 3546.0 25 4151.0 26 6025.0 27 7294.0 28 8479.0 29 9664.0 30 11241.5 31 12819.0 32 14833.0 33 16847.0 34 20054.5 35 23262.0 36 25227.5 37 27193.0 38 28916.0 39 30639.0 40 33447.0 41 36255.0 42 39471.0 43 42687.0 44 47048.0 45 51409.0 46 66520.5 47 81632.0 48 80287.5 49 78943.0 50 77369.5 51 75796.0 52 66921.0 53 58046.0 54 52710.5 55 47375.0 56 44493.5 57 41612.0 58 39287.5 59 36963.0 60 34984.0 61 33005.0 62 30292.5 63 27580.0 64 24610.0 65 21640.0 66 19184.5 67 16729.0 68 14095.0 69 11461.0 70 9895.0 71 8329.0 72 6770.0 73 5211.0 74 4233.0 75 2626.5 76 1998.0 77 1491.0 78 984.0 79 714.5 80 445.0 81 285.5 82 126.0 83 110.5 84 95.0 85 72.0 86 49.0 87 29.0 88 9.0 89 9.0 90 9.0 91 7.0 92 5.0 93 3.5 94 2.0 95 3.5 96 5.0 97 3.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 852529.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.74393994852903 #Duplication Level Percentage of deduplicated Percentage of total 1 73.96926440666924 24.960144161755128 2 8.490806291992032 5.730265152631432 3 3.3331618240413885 3.374220372875463 4 1.9925427232096147 2.68944967987455 5 1.4082237298634872 2.375950848730355 6 1.1266844995255698 2.281126445575759 7 0.9179854483613261 2.1683512090189665 8 0.7987889414508595 2.1563428857493507 9 0.7186466346468283 2.1824971995361557 >10 7.131461418955393 44.79805766733398 >50 0.07611997574557518 1.6959748575991602 >100 0.029679797796056086 1.8930958146240735 >500 0.0027933927337458913 0.612337023003686 >1k 0.003142566825464128 1.8473796774436775 >5k 6.983481834364728E-4 1.2348070042483412 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTC 5464 0.6409166139802869 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5016 0.5883670819409076 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGC 2963 0.3475541594479484 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCG 2921 0.3426276408192566 No Hit CCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCTGC 1870 0.21934737703937346 No Hit GCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCTGC 1819 0.2133651758473905 No Hit GAACTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCT 1714 0.20104887927566098 No Hit CGCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCTG 1196 0.14028848285512868 No Hit GAATGCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTT 1134 0.13301600297467886 No Hit CGTTCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTC 1040 0.12198998509141624 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTT 1022 0.11987861996483405 No Hit CTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCTGCT 998 0.11706346646272443 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1729806258790024E-4 0.0 0.0 0.12421864828058635 0.0 2 1.1729806258790024E-4 0.0 0.0 0.6544058911778954 0.0 3 1.1729806258790024E-4 0.0 0.0 1.0384397480906808 0.0 4 1.1729806258790024E-4 0.0 0.0 1.5739054038044453 0.0 5 1.1729806258790024E-4 0.0 0.0 3.04505770478189 0.0 6 1.1729806258790024E-4 0.0 0.0 4.411110941680576 0.0 7 1.1729806258790024E-4 0.0 0.0 5.28685827696184 0.0 8 1.1729806258790024E-4 0.0 0.0 6.594966270942103 0.0 9 1.1729806258790024E-4 0.0 0.0 7.26602848700748 0.0 10 1.1729806258790024E-4 0.0 0.0 8.623049773086898 0.0 11 1.1729806258790024E-4 0.0 0.0 9.509588530126248 0.0 12 1.1729806258790024E-4 0.0 0.0 10.715178017404687 0.0 13 1.1729806258790024E-4 0.0 0.0 11.221201859408888 0.0 14 1.1729806258790024E-4 0.0 0.0 11.477028933913099 0.0 15 1.1729806258790024E-4 0.0 0.0 11.771212474883553 0.0 16 1.1729806258790024E-4 0.0 0.0 12.200171489767504 0.0 17 1.1729806258790024E-4 0.0 0.0 12.664906413740765 0.0 18 1.1729806258790024E-4 0.0 0.0 13.297025673026958 0.0 19 1.1729806258790024E-4 0.0 0.0 13.678830866750573 0.0 20 1.1729806258790024E-4 0.0 0.0 14.075532914422853 0.0 21 1.1729806258790024E-4 0.0 0.0 14.46167813646222 0.0 22 1.1729806258790024E-4 0.0 0.0 14.895680968037452 0.0 23 1.1729806258790024E-4 0.0 0.0 15.311033407661206 0.0 24 1.1729806258790024E-4 0.0 0.0 15.652605365917172 0.0 25 1.1729806258790024E-4 0.0 0.0 15.965204702713926 0.0 26 1.1729806258790024E-4 0.0 0.0 16.273698607320103 0.0 27 1.1729806258790024E-4 0.0 0.0 16.6401377548447 0.0 28 3.518941877637007E-4 0.0 0.0 16.975962108033862 0.0 29 3.518941877637007E-4 0.0 0.0 17.32867738223568 0.0 30 3.518941877637007E-4 0.0 0.0 17.83399743586435 0.0 31 3.518941877637007E-4 0.0 0.0 18.211345303209626 0.0 32 3.518941877637007E-4 0.0 0.0 18.592915900808066 0.0 33 3.518941877637007E-4 0.0 0.0 18.95865125995714 0.0 34 3.518941877637007E-4 0.0 0.0 19.316644946975412 0.0 35 3.518941877637007E-4 0.0 0.0 19.692937131757393 0.0 36 3.518941877637007E-4 0.0 0.0 20.030286359760197 0.0 37 3.518941877637007E-4 0.0 0.0 20.3831189320246 0.0 38 3.518941877637007E-4 0.0 0.0 20.76081869355764 0.0 39 3.518941877637007E-4 0.0 0.0 21.272590140628648 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCG 20 7.032261E-4 45.0 1 TAACGCC 25 3.8899547E-5 45.0 12 TATAGCG 20 7.032261E-4 45.0 1 CGTTTTT 2610 0.0 42.327583 1 CGACGGT 80 0.0 42.1875 28 ATTCGAC 45 1.9272193E-8 40.0 42 TTCGACT 45 1.9272193E-8 40.0 43 CTCACGA 70 0.0 38.571426 24 CGGTCTA 70 0.0 38.571426 31 GATTACG 35 6.2463914E-6 38.571426 1 ATCACGG 55 2.746674E-9 36.81818 2 TCACGAC 75 1.8189894E-12 36.000004 25 TCGTTAG 25 0.0021068037 36.0 1 CTATCGG 25 0.0021068037 36.0 2 GTCGTAA 25 0.0021068037 36.0 9 TTCGCAC 25 0.0021068037 36.0 37 TCGAACG 25 0.0021068037 36.0 1 ATGGGCG 265 0.0 35.660378 5 TCGATGG 150 0.0 34.500004 2 CGAATAT 85 0.0 34.411766 14 >>END_MODULE