##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935742.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 520679 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95215286193605 33.0 31.0 34.0 30.0 34.0 2 31.99668125658995 33.0 31.0 34.0 30.0 34.0 3 32.04134024994286 33.0 31.0 34.0 30.0 34.0 4 35.712796175762804 37.0 35.0 37.0 33.0 37.0 5 34.802817090760335 37.0 35.0 37.0 33.0 37.0 6 35.249793058679145 37.0 35.0 37.0 33.0 37.0 7 35.784980765500435 37.0 35.0 37.0 35.0 37.0 8 35.71931650786761 37.0 35.0 37.0 35.0 37.0 9 37.54250315453475 39.0 37.0 39.0 35.0 39.0 10 37.217998037178376 39.0 37.0 39.0 34.0 39.0 11 37.170183548789176 39.0 37.0 39.0 34.0 39.0 12 37.1370594934691 39.0 37.0 39.0 34.0 39.0 13 37.01919992932306 39.0 37.0 39.0 33.0 39.0 14 38.15934193620254 40.0 37.0 41.0 33.0 41.0 15 38.22216375156286 40.0 37.0 41.0 33.0 41.0 16 38.28989646211966 40.0 37.0 41.0 34.0 41.0 17 38.22257091221271 40.0 37.0 41.0 34.0 41.0 18 38.200059921756015 40.0 37.0 41.0 34.0 41.0 19 38.11901766731518 40.0 37.0 41.0 34.0 41.0 20 38.03429752304203 40.0 37.0 41.0 33.0 41.0 21 38.042625110672795 40.0 37.0 41.0 34.0 41.0 22 38.08699025695294 40.0 37.0 41.0 34.0 41.0 23 38.03921994165311 40.0 37.0 41.0 34.0 41.0 24 38.00676232381179 40.0 37.0 41.0 34.0 41.0 25 37.8886242771458 40.0 36.0 41.0 33.0 41.0 26 37.88942131332357 40.0 36.0 41.0 33.0 41.0 27 37.85831961726899 40.0 36.0 41.0 33.0 41.0 28 37.73649599849428 40.0 36.0 41.0 33.0 41.0 29 37.64903712268019 40.0 36.0 41.0 33.0 41.0 30 37.59511138340513 40.0 36.0 41.0 33.0 41.0 31 37.54351913559026 40.0 36.0 41.0 33.0 41.0 32 37.402758705459604 40.0 36.0 41.0 32.0 41.0 33 37.28395230074576 40.0 36.0 41.0 32.0 41.0 34 37.2109956422287 40.0 36.0 41.0 32.0 41.0 35 37.12939450217888 40.0 35.0 41.0 32.0 41.0 36 37.05251604155343 40.0 35.0 41.0 31.0 41.0 37 36.992075731880874 40.0 35.0 41.0 31.0 41.0 38 36.87630958805713 39.0 35.0 41.0 31.0 41.0 39 36.75465689993259 39.0 35.0 41.0 31.0 41.0 40 36.665899719404855 39.0 35.0 41.0 31.0 41.0 41 36.60459131249772 39.0 35.0 41.0 31.0 41.0 42 36.65551136112653 39.0 35.0 41.0 31.0 41.0 43 36.53163657454977 39.0 35.0 41.0 31.0 41.0 44 36.43977575435153 39.0 35.0 41.0 30.0 41.0 45 36.3873903114971 39.0 35.0 41.0 30.0 41.0 46 36.2417266684464 39.0 35.0 41.0 30.0 41.0 47 36.09716351149172 39.0 35.0 41.0 30.0 41.0 48 36.04185880360068 38.0 35.0 40.0 29.0 41.0 49 35.991597510174216 38.0 35.0 40.0 29.0 41.0 50 35.780021856076395 38.0 35.0 40.0 29.0 41.0 51 34.56234839507643 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 13.0 10 12.0 11 14.0 12 10.0 13 18.0 14 11.0 15 16.0 16 28.0 17 61.0 18 164.0 19 285.0 20 625.0 21 1122.0 22 1557.0 23 2083.0 24 2503.0 25 3232.0 26 4118.0 27 4726.0 28 5303.0 29 6430.0 30 8245.0 31 10516.0 32 13792.0 33 18504.0 34 31074.0 35 41412.0 36 38382.0 37 57166.0 38 100630.0 39 168491.0 40 133.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.99908580910695 18.079661365255753 21.31197916566637 16.60927365997092 2 26.882781905934365 30.56374464881434 25.017141079244603 17.536332366006697 3 28.83004691950319 29.00597104934134 26.29604804495668 15.86793398619879 4 26.904676393708982 24.68507468132957 30.581413884562274 17.82883504039917 5 27.214464190028792 30.08302620232427 24.079327186231826 18.623182421415112 6 24.43155955972874 36.74452013620676 24.4033271939141 14.420593110150401 7 75.03240960361374 6.52359707228446 13.673491729069157 4.7705015950326395 8 75.76606700097372 9.320137743216069 9.216427011652092 5.697368244158109 9 69.93925239927096 7.552061826960566 11.822639284472775 10.686046489295709 10 38.06952076039172 26.509231215393747 19.161133827175668 16.260114197038867 11 29.88194261723634 25.076486664528435 25.805150582220527 19.236420136014704 12 26.61908776808744 21.39264306799391 30.414132315687787 21.574136848230868 13 24.14520270646598 24.8072228762827 32.294561524470936 18.753012892780387 14 20.01156182600028 30.073039242988482 28.706746383088237 21.208652547923002 15 17.923903210999484 25.853164809796436 36.46142825041917 19.761503728784913 16 20.45098803677506 25.229940135861057 30.775199307058664 23.543872520305218 17 20.36552271168993 25.867569078069213 28.78088035046545 24.986027859775408 18 21.454869506932294 25.411625973008324 30.006011381292502 23.12749313876688 19 22.097107814987737 28.044918270181817 26.943856003410932 22.914117911419513 20 24.141361568259907 25.786713118831372 29.126198675191432 20.94572663771729 21 22.550554180214682 29.004626650969218 28.120780749751766 20.324038419064337 22 20.33095246783527 25.289669834965494 28.592856635278164 25.786521061921068 23 20.346124963749258 28.049335579118807 28.429992375340664 23.174547081791278 24 21.390338385070265 25.482302916000073 28.787026171595166 24.3403325273345 25 19.80855767180931 29.73040971500675 27.070037393480433 23.390995219703502 26 20.20457902085546 26.07825550867233 28.679858415645725 25.037307054826485 27 22.43935322914886 27.070229450390737 26.878364596997383 23.612052723463016 28 20.487670906643057 26.95307473510551 29.865425722950224 22.693828635301212 29 22.74337931815956 25.126229404297078 28.399071212781774 23.73132006476159 30 21.809022449532243 26.953458848926115 28.22852467643212 23.00899402510952 31 24.575794299366787 24.944735624060122 25.85950268783646 24.61996738873663 32 24.601721982257782 26.976697735072857 27.647744579673848 20.77383570299551 33 23.04164369986114 26.721262044368988 25.80611086677204 24.43098338899783 34 24.04494899928747 24.47304385235433 29.23106174821723 22.25094540014097 35 21.054238792038856 23.829653202837065 29.874260340824193 25.24184766429989 36 26.863960328724605 25.737930663614243 27.212351564015446 20.185757443645702 37 21.799611660927365 24.68296205531623 31.77581580974074 21.74161047401566 38 22.360801952834663 27.052752271553103 28.07776000184375 22.508685773768484 39 23.42556546355816 24.899986363959368 30.36362134827792 21.310826824204547 40 21.675927010691808 24.975272672798404 31.838042248679127 21.51075806783066 41 21.062497239181916 25.47404446885701 29.75038363367833 23.713074658282743 42 22.74971719619958 23.862686991409294 30.60023546177203 22.787360350619096 43 24.933596323262506 23.653921129909214 27.898378847620126 23.51410369920815 44 23.000351464145854 24.35934616145456 28.38639545670173 24.25390691769785 45 20.946494865358503 24.137520430053833 28.780688293555144 26.135296411032517 46 24.469202714148256 25.890039736574742 27.652738059341743 21.988019489935258 47 20.663210922660603 23.905323625496706 33.25350167761711 22.177963774225578 48 22.00127141674621 23.5586609023986 29.90556561720369 24.5345020636515 49 21.584507921387267 22.832493724540456 32.654476174379994 22.928522179692287 50 21.580858840091498 22.573216895630512 31.596434655517125 24.249489608760868 51 20.630945361729587 22.792545887197292 28.715773057872507 27.86073569320061 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 164.0 1 535.0 2 906.0 3 1496.5 4 2087.0 5 1458.5 6 830.0 7 856.0 8 882.0 9 876.0 10 870.0 11 902.0 12 934.0 13 1024.5 14 1115.0 15 1083.0 16 1051.0 17 1054.5 18 1058.0 19 1097.5 20 1137.0 21 1454.0 22 1771.0 23 1888.0 24 2005.0 25 2615.0 26 3733.0 27 4241.0 28 4847.5 29 5454.0 30 6690.0 31 7926.0 32 9095.5 33 10265.0 34 11334.5 35 12404.0 36 14319.5 37 16235.0 38 17860.5 39 19486.0 40 22014.5 41 24543.0 42 27289.0 43 30035.0 44 34149.0 45 38263.0 46 53281.5 47 68300.0 48 62288.0 49 56276.0 50 53225.0 51 50174.0 52 42906.0 53 35638.0 54 31716.0 55 27794.0 56 24714.0 57 21634.0 58 20383.0 59 19132.0 60 17981.5 61 16831.0 62 14845.5 63 12860.0 64 10810.5 65 8761.0 66 7466.0 67 6171.0 68 5044.5 69 3918.0 70 3268.5 71 2619.0 72 2094.0 73 1569.0 74 1330.5 75 771.5 76 451.0 77 397.0 78 343.0 79 214.0 80 85.0 81 88.5 82 92.0 83 56.5 84 21.0 85 22.0 86 23.0 87 12.5 88 2.0 89 2.0 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 520679.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.057216354066064 #Duplication Level Percentage of deduplicated Percentage of total 1 74.86393131137825 25.496571057875496 2 9.737679009880939 6.632764816519258 3 3.5793361434783946 3.657066763271164 4 1.894320747984583 2.5806116623242876 5 1.237615528428414 2.1074869907419145 6 0.9402880971344152 1.921415709555592 7 0.7234742676306383 1.72476637615073 8 0.5897234900354158 1.606747239136886 9 0.48713839083887667 1.4931519814054095 >10 5.694362371460581 40.64640525714916 >50 0.20329452645573381 4.254947720946324 >100 0.041453911819185875 2.302789078374065 >500 0.0028393090287113613 0.8159458404014598 >1k 0.0028393090287113613 1.5309379645930208 >5k 0.001703585417226817 3.228391541555242 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTC 6580 1.2637344697980906 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGC 5065 0.9727682506880438 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCG 5048 0.9695032832128816 No Hit GCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTCTGC 2492 0.4786058204767236 TruSeq Adapter, Index 22 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTCT 1677 0.3220794385792398 No Hit CCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTCTGC 1505 0.2890456500070101 TruSeq Adapter, Index 22 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1178 0.22624304033771286 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCT 1064 0.20434855256309548 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTC 995 0.19109662575214287 No Hit CTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTTCTGCT 872 0.16747362578479255 TruSeq Adapter, Index 20 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCGTATTGT 867 0.16651334123327424 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCGTATTGTCGTATGCCGTCTT 761 0.14615530874108615 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCGTATTGTCGTA 724 0.1390492030598507 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.841138206073224E-4 0.0 0.0 0.1786129265824049 0.0 2 3.841138206073224E-4 0.0 0.0 1.1511891203601452 0.0 3 3.841138206073224E-4 0.0 0.0 1.5306935751201796 0.0 4 3.841138206073224E-4 0.0 0.0 2.297000647231788 0.0 5 3.841138206073224E-4 0.0 0.0 4.631068278152182 0.0 6 3.841138206073224E-4 0.0 0.0 5.855239024427719 0.0 7 3.841138206073224E-4 0.0 0.0 6.886776689668682 0.0 8 3.841138206073224E-4 0.0 0.0 8.493716858179416 0.0 9 3.841138206073224E-4 0.0 0.0 9.106378402048096 0.0 10 3.841138206073224E-4 0.0 0.0 11.226110521069604 0.0 11 3.841138206073224E-4 0.0 0.0 12.462572909604575 0.0 12 3.841138206073224E-4 0.0 0.0 14.653366085438437 0.0 13 3.841138206073224E-4 0.0 0.0 15.237987320402782 0.0 14 3.841138206073224E-4 0.0 0.0 15.503025856621834 0.0 15 3.841138206073224E-4 0.0 0.0 15.989506010421008 0.0 16 3.841138206073224E-4 0.0 0.0 16.676109464756596 0.0 17 3.841138206073224E-4 0.0 0.0 17.511557024577524 0.0 18 3.841138206073224E-4 0.0 0.0 18.546551714203954 0.0 19 3.841138206073224E-4 0.0 0.0 19.264844558739647 0.0 20 3.841138206073224E-4 0.0 0.0 19.84850550915247 0.0 21 3.841138206073224E-4 0.0 0.0 20.483445654616375 0.0 22 3.841138206073224E-4 0.0 0.0 21.20404318207571 0.0 23 3.841138206073224E-4 0.0 0.0 21.840135669001437 0.0 24 3.841138206073224E-4 0.0 0.0 22.336602782136403 0.0 25 5.761707309109835E-4 0.0 0.0 22.797731423775492 0.0 26 5.761707309109835E-4 0.0 0.0 23.205468244350165 0.0 27 5.761707309109835E-4 0.0 0.0 23.695789536355413 0.0 28 5.761707309109835E-4 0.0 0.0 24.143474194273246 0.0 29 5.761707309109835E-4 0.0 0.0 24.644166559434893 0.0 30 5.761707309109835E-4 0.0 0.0 25.293703030081875 0.0 31 5.761707309109835E-4 0.0 0.0 25.793627167602303 0.0 32 5.761707309109835E-4 0.0 0.0 26.260901630371112 0.0 33 5.761707309109835E-4 0.0 0.0 26.72875226387083 0.0 34 5.761707309109835E-4 0.0 0.0 27.180662173815346 0.0 35 5.761707309109835E-4 0.0 0.0 27.673096091833933 0.0 36 5.761707309109835E-4 0.0 0.0 28.144979920450027 0.0 37 7.682276412146448E-4 0.0 0.0 28.59420103365029 0.0 38 7.682276412146448E-4 0.0 0.0 29.06358812243244 0.0 39 7.682276412146448E-4 0.0 0.0 29.5285579022776 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATGCG 45 3.8380676E-10 45.000004 1 TAGTGCG 35 1.21021E-7 45.000004 1 CTATGCG 25 3.8878563E-5 45.0 1 AGTCCGA 20 7.0297276E-4 45.0 11 CGTGCTT 20 7.0297276E-4 45.0 42 GGCACGC 80 0.0 45.0 8 CCGTGTA 20 7.0297276E-4 45.0 26 CGTGTAT 20 7.0297276E-4 45.0 27 CAACCGG 30 2.1632059E-6 44.999996 2 ACTACCG 30 2.1632059E-6 44.999996 13 CACGGGC 80 0.0 42.1875 4 ATGACGG 110 0.0 40.909092 2 TCGAATG 55 6.002665E-11 40.909092 44 GGGCACG 100 0.0 40.5 7 CGGTCTA 45 1.9248546E-8 40.000004 31 CGATGAA 360 0.0 39.375004 19 TATGCGG 110 0.0 38.863636 2 CGGGTGA 105 0.0 38.57143 6 CGCGAGG 95 0.0 37.894737 2 TAACGGG 150 0.0 37.500004 3 >>END_MODULE