##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935741.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1196389 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.076261985023265 33.0 31.0 34.0 30.0 34.0 2 32.15062241461598 33.0 31.0 34.0 30.0 34.0 3 32.12764828162078 33.0 31.0 34.0 30.0 34.0 4 35.80840763330321 37.0 35.0 37.0 35.0 37.0 5 34.91917929703466 37.0 35.0 37.0 33.0 37.0 6 35.366322324929435 37.0 35.0 37.0 33.0 37.0 7 35.916811338118286 37.0 35.0 37.0 35.0 37.0 8 35.90468401163835 37.0 35.0 37.0 35.0 37.0 9 37.74907659632444 39.0 38.0 39.0 35.0 39.0 10 37.46959224800629 39.0 37.0 39.0 35.0 39.0 11 37.3638632585221 39.0 37.0 39.0 35.0 39.0 12 37.23830459825358 39.0 37.0 39.0 34.0 39.0 13 37.1806778564497 39.0 37.0 39.0 34.0 39.0 14 38.2267874412085 40.0 37.0 41.0 33.0 41.0 15 38.24484845648029 40.0 37.0 41.0 34.0 41.0 16 38.254469909034604 40.0 37.0 41.0 34.0 41.0 17 38.21176139198872 40.0 37.0 41.0 34.0 41.0 18 38.1385778371416 40.0 37.0 41.0 34.0 41.0 19 38.045515296446226 40.0 37.0 41.0 34.0 41.0 20 37.98436294549683 40.0 36.0 41.0 34.0 41.0 21 37.921207901443424 40.0 36.0 41.0 34.0 41.0 22 37.924658284220264 40.0 36.0 41.0 34.0 41.0 23 37.90296049194702 40.0 36.0 41.0 34.0 41.0 24 37.899139828266556 40.0 35.0 41.0 34.0 41.0 25 37.75517912652156 40.0 35.0 41.0 33.0 41.0 26 37.76463006597353 40.0 35.0 41.0 33.0 41.0 27 37.781864427038364 40.0 35.0 41.0 34.0 41.0 28 37.67223871165649 40.0 35.0 41.0 33.0 41.0 29 37.59282223423987 40.0 35.0 41.0 33.0 41.0 30 37.425278901761885 40.0 35.0 41.0 33.0 41.0 31 37.27254596958013 40.0 35.0 41.0 33.0 41.0 32 37.091577237838194 39.0 35.0 41.0 32.0 41.0 33 36.818857411761556 39.0 35.0 41.0 31.0 41.0 34 36.61464456794571 39.0 35.0 41.0 31.0 41.0 35 36.46047230457652 39.0 35.0 41.0 30.0 41.0 36 36.370518284604756 39.0 35.0 41.0 30.0 41.0 37 36.30032205244281 39.0 35.0 41.0 30.0 41.0 38 36.210840286896655 39.0 35.0 41.0 30.0 41.0 39 36.129211318392265 39.0 35.0 41.0 30.0 41.0 40 35.99888079880373 39.0 35.0 41.0 29.0 41.0 41 35.86281301483046 39.0 35.0 41.0 28.0 41.0 42 35.857624067088544 39.0 35.0 41.0 28.0 41.0 43 35.73412410177626 38.0 35.0 41.0 28.0 41.0 44 35.593672292205966 38.0 35.0 40.0 28.0 41.0 45 35.528018061015274 38.0 35.0 40.0 28.0 41.0 46 35.39506046946269 38.0 35.0 40.0 27.0 41.0 47 35.247299164402214 38.0 35.0 40.0 26.0 41.0 48 35.16929527101971 38.0 34.0 40.0 26.0 41.0 49 35.14120407325711 37.0 34.0 40.0 27.0 41.0 50 35.01894701472514 37.0 34.0 40.0 26.0 41.0 51 33.90197419066875 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 12.0 9 25.0 10 25.0 11 21.0 12 24.0 13 31.0 14 36.0 15 50.0 16 84.0 17 213.0 18 350.0 19 587.0 20 1125.0 21 1850.0 22 2760.0 23 4165.0 24 6612.0 25 10430.0 26 15021.0 27 18048.0 28 18169.0 29 18298.0 30 19889.0 31 23840.0 32 30348.0 33 42060.0 34 76244.0 35 97330.0 36 92698.0 37 136381.0 38 227764.0 39 351675.0 40 222.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.38966924637388 16.945826148518584 20.587283901807858 26.07722070329968 2 31.779880958450807 25.142825619426457 26.11140690862253 16.96588651350021 3 29.897466459487674 23.89222903253039 30.74760801043808 15.46269649754386 4 26.542203246602902 24.27905973725937 31.318492563873455 17.860244452264272 5 23.754648362698084 29.13684428726777 28.787543182025242 18.3209641680089 6 24.95066403987332 32.210008617598454 27.877220536129972 14.962106806398253 7 76.0512676061047 5.188195478226564 13.75764905895992 5.0028878567088135 8 77.48182238385675 4.6518314695303955 12.720277434847697 5.146068711765153 9 71.50341569506239 5.722302695862299 15.181099124114313 7.593182484960995 10 42.78073435981106 22.578191541379937 19.812285134684455 14.828788964124545 11 31.22170130283712 22.432503140700895 27.473589275728884 18.872206280733106 12 27.421097987360298 19.789382884663766 31.82685564644944 20.962663481526494 13 24.921075001525423 20.18624377188356 34.88447319391937 20.008208032671646 14 22.2441864644359 22.543002317808003 35.17676942867244 20.03604178908365 15 21.286805545687898 21.06029059110373 37.95588224231417 19.697021620894205 16 24.20508714138963 21.77519184813635 34.415812917036185 19.603908093437834 17 25.149512407753665 21.45690072376125 32.61915647836949 20.77443039011559 18 24.75265152053387 23.47221514072764 31.63904047930899 20.1360928594295 19 22.993441096499552 28.152883384919118 28.725523220290388 20.128152298290942 20 22.988593174962325 28.394861537509957 28.61260008241467 20.00394520511305 21 25.143577883113267 27.184218510868956 29.031276616551978 18.6409269894658 22 23.15985854099294 23.261664893274677 31.22445960302209 22.35401696271029 23 20.78404264833595 24.176417536436727 33.23927251086394 21.80026730436338 24 21.34681947092459 22.40609032680842 34.11239989668912 22.134690305577866 25 22.837137419351063 22.13502464499423 32.765597142735345 22.26224079291936 26 20.536380725666987 22.014495285396304 32.590904797687045 24.85821919124967 27 21.309540626000405 23.073766141280135 30.60100017636404 25.015693056355413 28 20.75654323134031 24.014513674064204 32.02628910830842 23.202653986287068 29 22.307878123252554 22.202728376807208 30.047334102871226 25.442059397069013 30 23.03740672975094 23.55513131598502 26.595697553220564 26.811764401043476 31 22.70958693200957 26.987877688611313 25.160712778201738 25.141822601177378 32 23.561818104312227 29.2193425382547 24.486350175402816 22.73248918203026 33 22.521604595160937 27.36392594716267 25.65871133887055 24.45575811880584 34 23.585639787727906 25.44038769998721 26.169665551923327 24.804306960361554 35 22.779798209445257 27.512038308610325 23.756570814342158 25.95159266760226 36 21.61412383430473 29.45480107222651 23.395400659818836 25.535674433649923 37 20.897132955919854 29.288634382295392 24.67483402137599 25.13939864040876 38 20.762143416564342 25.68253302228623 25.79729502695194 27.758028534197486 39 20.289888990955284 24.390227593199203 26.362997319433727 28.95688609641179 40 21.2462668914542 22.62391245656722 28.822732405597172 27.3070882463814 41 19.756366867298176 23.070506331970623 31.056955555425535 26.116171245305665 42 22.502714418136577 22.973213561809747 30.65817221656167 23.865899803492006 43 22.981906386635117 21.92414005812491 31.16310832011996 23.930845235120017 44 22.324845848632844 21.353171919835436 32.77596166464252 23.546020566889197 45 21.870144242382704 20.635512362617845 33.1290240883191 24.36531930668035 46 25.658794923724642 21.02543570694816 30.22787738770584 23.08789198162136 47 25.60530061710698 20.916524642068758 30.520006452750735 22.958168288073526 48 23.48140947467755 20.760889643752993 30.09338935747487 25.66431152409459 49 22.604186431001956 20.267822589475497 31.22211922710757 25.905871752414978 50 22.107107303728135 19.649629008625123 33.670068848844316 24.57319483880243 51 21.124233004482658 19.834100781601972 32.7153626454272 26.326303568488175 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 353.0 1 1077.0 2 1801.0 3 11747.0 4 21693.0 5 14257.5 6 6822.0 7 6657.5 8 6493.0 9 6462.5 10 6432.0 11 6411.0 12 6390.0 13 6250.0 14 6110.0 15 5730.5 16 5351.0 17 4967.0 18 4583.0 19 4129.5 20 3676.0 21 3613.5 22 3551.0 23 3501.5 24 3452.0 25 3837.0 26 4676.5 27 5131.0 28 6009.5 29 6888.0 30 8310.5 31 9733.0 32 11231.0 33 12729.0 34 15204.0 35 17679.0 36 19745.5 37 21812.0 38 26773.5 39 31735.0 40 38768.5 41 45802.0 42 54268.5 43 62735.0 44 70080.0 45 77425.0 46 98002.5 47 118580.0 48 118038.5 49 117497.0 50 114829.0 51 112161.0 52 99511.0 53 86861.0 54 76708.5 55 66556.0 56 62650.5 57 58745.0 58 56832.5 59 54920.0 60 51842.5 61 48765.0 62 45987.5 63 43210.0 64 39928.5 65 36647.0 66 31930.5 67 27214.0 68 23722.0 69 20230.0 70 16796.0 71 13362.0 72 10824.5 73 8287.0 74 6778.5 75 4104.0 76 2938.0 77 2179.5 78 1421.0 79 1038.0 80 655.0 81 446.5 82 238.0 83 179.5 84 121.0 85 83.5 86 46.0 87 38.0 88 30.0 89 22.0 90 14.0 91 15.0 92 16.0 93 10.0 94 4.0 95 2.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1196389.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.153634432731636 #Duplication Level Percentage of deduplicated Percentage of total 1 70.81223162575768 24.184950723120455 2 8.502628781609806 5.807913502486474 3 3.896134989669381 3.992015104132281 4 2.526840819266414 3.4520319044371686 5 1.9324056040010689 3.299933728740724 6 1.6043416631462353 3.287645920097832 7 1.385279829082961 3.311863860867549 8 1.188856355526142 3.248301228773559 9 1.0236640760338511 3.1465663771302137 >10 7.033412930832093 38.58520685144568 >50 0.0601550766597736 1.3482135043554444 >100 0.027835064648233074 1.6719035261741313 >500 0.0019882188052574162 0.38833113685028425 >1k 0.0037279102598576554 2.5737654058085946 >5k 2.4852735065717703E-4 0.6066453847145316 >10k+ 2.4852735065717703E-4 1.094711840865162 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12897 1.0779938632000128 No Hit GAATCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTC 7147 0.5973809521819408 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTT 4051 0.3386022439189929 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCT 2704 0.22601344545962895 No Hit CGTTCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTC 2576 0.21531458413609622 No Hit CGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTG 2466 0.20612025018618527 No Hit GAACTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCT 2415 0.2018574226275902 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCG 2409 0.20135591350304957 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGC 2207 0.1844717729768495 No Hit CCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 2140 0.17887158775281284 No Hit GCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 2028 0.1695100840947217 No Hit CGTCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCT 1551 0.12964010869374426 No Hit CTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGCT 1421 0.11877407766203132 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.5075456227029836E-4 0.0 0.0 0.12621312967605017 0.0 2 2.5075456227029836E-4 0.0 0.0 0.5530809795141881 0.0 3 2.5075456227029836E-4 0.0 0.0 0.9954120273589945 0.0 4 2.5075456227029836E-4 0.0 0.0 1.5961363737045393 0.0 5 2.5075456227029836E-4 0.0 0.0 3.1682003094311297 0.0 6 2.5075456227029836E-4 0.0 0.0 5.040751795611628 0.0 7 2.5075456227029836E-4 0.0 0.0 6.406611896297943 0.0 8 2.5075456227029836E-4 0.0 0.0 8.239209822223375 0.0 9 2.5075456227029836E-4 0.0 0.0 9.483788299624955 0.0 10 2.5075456227029836E-4 0.0 0.0 11.319311695443538 0.0 11 2.5075456227029836E-4 0.0 0.0 12.796841161194227 0.0 12 2.5075456227029836E-4 0.0 0.0 14.055629063791125 0.0 13 2.5075456227029836E-4 0.0 0.0 14.663290953026149 0.0 14 3.3433941636039783E-4 0.0 0.0 15.031315065584856 0.0 15 3.3433941636039783E-4 0.0 0.0 15.350107699084495 0.0 16 3.3433941636039783E-4 0.0 0.0 15.720221432995455 0.0 17 3.3433941636039783E-4 0.0 0.0 16.130372312015574 0.0 18 3.3433941636039783E-4 0.0 0.0 16.64199520390107 0.0 19 5.015091245405967E-4 0.0 0.0 16.972573301827417 0.0 20 5.015091245405967E-4 0.0 0.0 17.29546159317747 0.0 21 5.015091245405967E-4 0.0 0.0 17.625371012271092 0.0 22 5.015091245405967E-4 0.0 0.0 18.006685116630127 0.0 23 5.015091245405967E-4 0.0 0.0 18.3885007301137 0.0 24 5.015091245405967E-4 0.0 0.0 18.703197705762925 0.0 25 5.015091245405967E-4 0.0 0.0 18.9786097999898 0.0 26 5.015091245405967E-4 0.0 0.0 19.256780194401653 0.0 27 5.015091245405967E-4 0.0 0.0 19.56654566365956 0.0 28 5.015091245405967E-4 0.0 0.0 19.857003031622657 0.0 29 5.015091245405967E-4 0.0 0.0 20.15356209393433 0.0 30 5.015091245405967E-4 0.0 0.0 20.54716317184461 0.0 31 5.015091245405967E-4 0.0 0.0 20.87632032725142 0.0 32 5.015091245405967E-4 0.0 0.0 21.19603239414605 0.0 33 5.850939786306962E-4 0.0 0.0 21.507051636215312 0.0 34 5.850939786306962E-4 0.0 0.0 21.81522899324551 0.0 35 5.850939786306962E-4 0.0 0.0 22.142714451570516 0.0 36 5.850939786306962E-4 0.0 0.0 22.458247275760645 0.0 37 5.850939786306962E-4 0.0 0.0 22.77612047586529 0.0 38 5.850939786306962E-4 0.0 0.0 23.152001564708467 0.0 39 6.686788327207957E-4 0.0 0.0 23.62467391458798 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTCCGT 20 7.033402E-4 45.0 9 TATAGCG 40 6.8157533E-9 45.0 1 TATCGCG 20 7.033402E-4 45.0 1 CGTTTTT 6660 0.0 43.91892 1 CTATGCG 60 3.6379788E-12 41.249996 1 CATAGCG 50 1.0822987E-9 40.5 1 CGTTTTC 310 0.0 39.919353 1 CGTTATT 160 0.0 39.375 1 ACGGGTA 75 0.0 39.0 5 TATGCGG 215 0.0 37.67442 2 TTTAACG 60 1.5643309E-10 37.499996 1 CCGTAAG 30 1.13994996E-4 37.499996 1 GTTTTTT 7965 0.0 37.0339 2 TACGTAG 80 0.0 36.5625 1 GTACGAG 80 0.0 36.5625 1 CGTTTCT 465 0.0 36.290325 1 CGTAAGG 155 0.0 36.29032 2 CTCACGA 100 0.0 36.0 24 TAACGAG 25 0.0021071432 36.0 1 ATATACG 25 0.0021071432 36.0 1 >>END_MODULE