##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935740.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 488565 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.913178389774135 33.0 31.0 34.0 30.0 34.0 2 31.95564561522008 33.0 31.0 34.0 30.0 34.0 3 31.998943845752358 33.0 31.0 34.0 30.0 34.0 4 35.68635493741877 37.0 35.0 37.0 33.0 37.0 5 34.792525047844194 37.0 35.0 37.0 33.0 37.0 6 35.26248298588724 37.0 35.0 37.0 33.0 37.0 7 35.86657456019158 37.0 35.0 37.0 35.0 37.0 8 35.850736340098045 37.0 35.0 37.0 35.0 37.0 9 37.66538945687882 39.0 38.0 39.0 35.0 39.0 10 37.27009916797151 39.0 37.0 39.0 34.0 39.0 11 37.17715350055776 39.0 37.0 39.0 34.0 39.0 12 37.209558605303286 39.0 37.0 39.0 34.0 39.0 13 37.15078444014614 39.0 37.0 39.0 33.0 39.0 14 38.26784153592664 40.0 38.0 41.0 33.0 41.0 15 38.351717785760336 40.0 38.0 41.0 34.0 41.0 16 38.36811069151495 40.0 38.0 41.0 34.0 41.0 17 38.31881939967047 40.0 37.0 41.0 34.0 41.0 18 38.335408799238586 40.0 37.0 41.0 34.0 41.0 19 38.23990052500691 40.0 37.0 41.0 34.0 41.0 20 38.23500660096405 40.0 37.0 41.0 34.0 41.0 21 38.19795523625311 40.0 37.0 41.0 34.0 41.0 22 38.25525774461945 40.0 37.0 41.0 34.0 41.0 23 38.24663248493036 40.0 37.0 41.0 34.0 41.0 24 38.2219684177131 40.0 37.0 41.0 34.0 41.0 25 38.09548166569443 40.0 37.0 41.0 34.0 41.0 26 38.1418296439573 40.0 37.0 41.0 34.0 41.0 27 38.14027406793364 40.0 37.0 41.0 34.0 41.0 28 38.02703018022167 40.0 37.0 41.0 34.0 41.0 29 38.02305118049799 40.0 37.0 41.0 34.0 41.0 30 37.91254797212244 40.0 37.0 41.0 34.0 41.0 31 37.838905775075986 40.0 37.0 41.0 33.0 41.0 32 37.794596420128336 40.0 37.0 41.0 33.0 41.0 33 37.65374515161749 40.0 36.0 41.0 33.0 41.0 34 37.58007225241268 40.0 36.0 41.0 33.0 41.0 35 37.528861052265306 40.0 36.0 41.0 33.0 41.0 36 37.48791870068466 40.0 36.0 41.0 33.0 41.0 37 37.437841433586115 40.0 36.0 41.0 33.0 41.0 38 37.37234963617942 40.0 36.0 41.0 33.0 41.0 39 37.25918352726863 40.0 36.0 41.0 32.0 41.0 40 37.1628360607084 39.0 36.0 41.0 32.0 41.0 41 37.070533091809686 39.0 35.0 41.0 31.0 41.0 42 37.17201600605856 39.0 36.0 41.0 32.0 41.0 43 37.10644233622957 39.0 35.0 41.0 32.0 41.0 44 36.98869546529121 39.0 35.0 41.0 31.0 41.0 45 36.97134465219572 39.0 35.0 41.0 31.0 41.0 46 36.80027631942526 39.0 35.0 41.0 31.0 41.0 47 36.68796987094859 39.0 35.0 41.0 31.0 41.0 48 36.680521527330036 39.0 35.0 41.0 31.0 41.0 49 36.682054588437566 39.0 35.0 41.0 31.0 41.0 50 36.55618802001781 39.0 35.0 41.0 31.0 41.0 51 35.40394829756532 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 3.0 11 6.0 12 1.0 13 5.0 14 8.0 15 7.0 16 21.0 17 33.0 18 58.0 19 174.0 20 329.0 21 659.0 22 888.0 23 1280.0 24 1829.0 25 2403.0 26 3239.0 27 3702.0 28 4394.0 29 5225.0 30 6558.0 31 8841.0 32 11393.0 33 16263.0 34 26712.0 35 36805.0 36 34805.0 37 53871.0 38 99357.0 39 169571.0 40 117.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.06966319732277 19.864705822152633 23.423904700500444 15.641726280024152 2 26.9614073869393 27.68352215160726 27.51015729739134 17.844913164062103 3 29.305414837329728 27.089742408891343 28.536428110896196 15.068414642882727 4 26.387277025574896 26.431692814671536 29.41962686643538 17.761403293318185 5 26.180139797161072 29.75837401369316 25.90852803618761 18.152958152958153 6 23.94031500414479 34.734170478851325 25.081002527811037 16.24451198919284 7 79.43733177775731 4.245903820371906 11.370851370851371 4.945913031019414 8 80.05157962604771 5.618494980197108 8.388648388648388 5.941277005106793 9 74.08615025636303 6.279000747085854 11.230235485554635 8.404613510996489 10 33.85793087920747 35.66403651510034 16.99282592899614 13.485206676696038 11 24.290319609468547 26.02253538423751 31.114590689058772 18.572554317235166 12 22.37839386775557 22.513892726658685 34.44065784491316 20.66705556067258 13 21.34987156263752 27.376909930101416 34.544021778064334 16.72919672919673 14 17.986347773581816 31.145088166364758 29.92375630673503 20.944807753318393 15 15.673656524720355 26.932752039135018 38.250795697604204 19.142795738540418 16 18.07026700643722 28.70201508499381 31.122573250232826 22.105144658336148 17 18.268602949454014 26.935208211803957 30.17735613480294 24.618832703939088 18 21.593851381085425 24.49356789782322 32.557592132060215 21.354988589031144 19 19.48461310163438 28.635289060820973 29.405503873588977 22.474593963955666 20 21.86648654733761 27.079098993992613 30.848095954478932 20.206318504190847 21 20.4601230133145 30.558676941655666 29.571090847686595 19.41010919734324 22 18.91785125827679 25.89686121601015 29.490855873834597 25.694431651878457 23 16.34214485278315 29.888346484091166 29.432931135058794 24.33657752806689 24 19.238586472629027 25.72513381024019 31.347517730496456 23.688761986634326 25 16.84647897413855 30.739614994934144 28.954591507782997 23.45931452314431 26 17.877662132981282 27.19515315259996 29.874223491244766 25.05296122317399 27 19.513268449438662 27.203340394829755 29.629629629629626 23.653761526101952 28 16.079539058262462 26.85620132428643 33.382661467767846 23.681598149683257 29 19.3456346647836 24.192686745878238 29.561470838066583 26.900207751271584 30 20.30702158361733 25.521066797662545 32.23030712392415 21.941604494795985 31 20.913491551789424 26.00861707244686 29.903902244327774 23.173989131435942 32 22.133595325084688 26.46771668048264 27.493168769764516 23.90551922466816 33 20.84410467389191 25.985488113147685 29.28023906747311 23.890168145487294 34 18.796680073275816 24.03057934972829 32.84578305854902 24.32695751844688 35 18.595069233367106 24.41026270813505 30.257591108654943 26.73707694984291 36 19.788973831527024 27.06784153592664 30.136010561542477 23.00717407100386 37 19.17718215590556 25.474604198008453 33.9109432726454 21.437270373440587 38 20.119124374443523 27.131497344263302 29.662583279604554 23.086795001688618 39 22.72655634357762 25.22612139633416 30.285632413291985 21.76168984679623 40 23.032145159804735 23.36372847011145 30.40168657189934 23.20243979818448 41 17.281630898652175 26.1971283247879 29.625740689570478 26.89550008698945 42 19.83031940478749 24.253477019434467 30.34560396262524 25.570599613152805 43 21.449346555729534 24.891058508079787 30.34478523840226 23.314809697788423 44 21.0825581038347 24.380174592940552 30.02261725665981 24.514650046564938 45 21.55148240254623 22.649800947673288 28.909356994463376 26.8893596553171 46 23.357792719494846 23.762037804590996 29.04239968069755 23.837769795216605 47 17.807661211916532 24.025462323334665 33.99690931605826 24.169967148690553 48 19.591456612733207 23.906133267835393 30.58958378107314 25.91282633835825 49 21.3826205315567 21.46960998024828 33.20684044088299 23.940929047312025 50 20.833051896881685 21.995230931401146 31.91468893596553 25.257028235751637 51 19.435489648255604 21.017469528107828 28.94886043822214 30.598180385414427 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 131.0 1 278.0 2 425.0 3 994.5 4 1564.0 5 1139.5 6 715.0 7 748.5 8 782.0 9 798.5 10 815.0 11 860.0 12 905.0 13 930.5 14 956.0 15 977.5 16 999.0 17 917.5 18 836.0 19 996.0 20 1156.0 21 1354.5 22 1553.0 23 1729.5 24 1906.0 25 2259.5 26 3527.5 27 4442.0 28 5113.5 29 5785.0 30 7349.0 31 8913.0 32 10127.5 33 11342.0 34 13128.5 35 14915.0 36 16499.0 37 18083.0 38 19434.0 39 20785.0 40 22689.5 41 24594.0 42 28220.5 43 31847.0 44 36364.0 45 40881.0 46 53383.0 47 65885.0 48 64269.0 49 62653.0 50 59877.5 51 57102.0 52 46998.0 53 36894.0 54 30709.0 55 24524.0 56 20007.5 57 15491.0 58 12799.0 59 10107.0 60 8415.5 61 6724.0 62 5704.0 63 4684.0 64 3762.5 65 2841.0 66 2315.5 67 1790.0 68 1374.5 69 959.0 70 754.0 71 549.0 72 531.0 73 513.0 74 452.5 75 386.0 76 380.0 77 212.5 78 45.0 79 30.5 80 16.0 81 41.0 82 66.0 83 36.0 84 6.0 85 3.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 488565.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.005056096047426 #Duplication Level Percentage of deduplicated Percentage of total 1 74.41713644724173 28.28227445184637 2 10.894172221323206 8.2806725278278 3 4.026998875778141 4.5913895451800455 4 1.952398457003754 2.9680405152105642 5 1.2136714080671662 2.306282497288076 6 0.8467543373297433 1.930856765387301 7 0.6943663385434706 1.8472602153286162 8 0.545992075923484 1.6600367578775514 9 0.46916528635096383 1.604758772347788 >10 4.78015751863521 35.94807818721047 >50 0.09962725925093116 2.5459018065648458 >100 0.05143798711325197 3.1827888168556537 >500 0.004873072463360713 1.2906479252161802 >1k 0.0032487149755738086 3.5610112158587373 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTC 3733 0.7640743810956577 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGC 3398 0.6955062274211211 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCG 3230 0.6611198100559803 No Hit GCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 2889 0.5913235700469743 No Hit CCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 2504 0.5125213635851934 No Hit CTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGCT 1551 0.31746031746031744 No Hit GAACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCT 969 0.19833594301679408 No Hit TCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 848 0.17356953527166294 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 837 0.1713180436584692 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCT 708 0.14491418746737894 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCC 623 0.1275162977290637 No Hit ACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 617 0.12628821139459437 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTC 598 0.12239927133544154 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTGGTCAT 537 0.10991372693500354 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTA 535 0.10950436482351376 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3324020345296941 0.0 2 0.0 0.0 0.0 1.8210473529622466 0.0 3 0.0 0.0 0.0 2.4256751916326382 0.0 4 0.0 0.0 0.0 3.3749859281774177 0.0 5 0.0 0.0 0.0 5.894814405452704 0.0 6 0.0 0.0 0.0 7.4657415082947 0.0 7 0.0 0.0 0.0 8.870672274927594 0.0 8 0.0 0.0 0.0 11.154708175984771 0.0 9 0.0 0.0 0.0 12.032585224074586 0.0 10 0.0 0.0 0.0 14.478933202337458 0.0 11 0.0 0.0 0.0 16.51591906911056 0.0 12 0.0 0.0 0.0 19.097356544165056 0.0 13 0.0 0.0 0.0 19.913419913419915 0.0 14 0.0 0.0 0.0 20.27140707991772 0.0 15 0.0 0.0 0.0 20.854748088790643 0.0 16 0.0 0.0 0.0 21.827801827801828 0.0 17 0.0 0.0 0.0 23.18319977894446 0.0 18 0.0 0.0 0.0 24.80550182677842 0.0 19 0.0 0.0 0.0 25.759724908661077 0.0 20 0.0 0.0 0.0 26.604648306775967 0.0 21 4.0936211148977106E-4 0.0 0.0 27.531239446133064 0.0 22 6.140431672346566E-4 0.0 0.0 28.56631154503495 0.0 23 6.140431672346566E-4 0.0 0.0 29.62041898212111 0.0 24 8.187242229795421E-4 0.0 0.0 30.356861420691207 0.0 25 8.187242229795421E-4 0.0 0.0 31.01470633385527 0.0 26 0.0010234052787244277 0.0 0.0 31.664568685845282 0.0 27 0.0010234052787244277 0.0 0.0 32.33899276452468 0.0 28 0.0010234052787244277 0.0 0.0 32.978621063727445 0.0 29 0.0010234052787244277 0.0 0.0 33.679858360709424 0.0 30 0.0010234052787244277 0.0 0.0 34.64165464165464 0.0 31 0.0010234052787244277 0.0 0.0 35.318739574058725 0.0 32 0.0010234052787244277 0.0 0.0 35.98129215150492 0.0 33 0.0010234052787244277 0.0 0.0 36.63279195194089 0.0 34 0.0012280863344693131 0.0 0.0 37.2306653157717 0.0 35 0.0012280863344693131 0.0 0.0 37.911229826123446 0.0 36 0.0012280863344693131 0.0 0.0 38.511559362623196 0.0 37 0.0012280863344693131 0.0 0.0 39.08016333548248 0.0 38 0.0012280863344693131 0.0 0.0 39.68908947632352 0.0 39 0.0012280863344693131 0.0 0.0 40.33076458608374 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCACC 20 7.029301E-4 45.0 27 ACGCCGC 20 7.029301E-4 45.0 14 TTAATCG 20 7.029301E-4 45.0 20 TCCGAGG 35 1.21001E-7 45.0 2 CGTTGGA 20 7.029301E-4 45.0 33 GCGCCCT 20 7.029301E-4 45.0 32 TCGATCA 40 6.8012014E-9 45.0 17 GCCGCCG 20 7.029301E-4 45.0 16 TGTTGCG 35 1.21001E-7 45.0 1 CTCGCGG 20 7.029301E-4 45.0 2 ACTCGCG 20 7.029301E-4 45.0 1 ACATGCG 25 3.8875012E-5 45.0 1 GCGGAAT 20 7.029301E-4 45.0 5 GTAAGCG 25 3.8875012E-5 45.0 1 CGCCGCA 20 7.029301E-4 45.0 18 TGTCGTC 35 1.21001E-7 45.0 17 TGTCGCC 20 7.029301E-4 45.0 33 TGAGACG 25 3.8875012E-5 45.0 1 CTAAGCG 30 2.1629294E-6 44.999996 1 CGGTAAT 30 2.1629294E-6 44.999996 6 >>END_MODULE