##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935739.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 590086 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03595408126951 33.0 31.0 34.0 30.0 34.0 2 32.057039143446886 33.0 31.0 34.0 30.0 34.0 3 32.113569886423335 33.0 31.0 34.0 30.0 34.0 4 35.77938808919378 37.0 35.0 37.0 35.0 37.0 5 34.86259799419068 37.0 35.0 37.0 33.0 37.0 6 35.32074985680053 37.0 35.0 37.0 33.0 37.0 7 35.863518199042176 37.0 35.0 37.0 35.0 37.0 8 35.8298061638473 37.0 35.0 37.0 35.0 37.0 9 37.65133895737232 39.0 37.0 39.0 35.0 39.0 10 37.37543680073752 39.0 37.0 39.0 34.0 39.0 11 37.31668943170995 39.0 37.0 39.0 34.0 39.0 12 37.18728795463712 39.0 37.0 39.0 34.0 39.0 13 37.06507187087984 39.0 37.0 39.0 33.0 39.0 14 38.14829872255908 40.0 37.0 41.0 33.0 41.0 15 38.22878021169796 40.0 37.0 41.0 33.0 41.0 16 38.28749368736082 40.0 37.0 41.0 34.0 41.0 17 38.243464511952496 40.0 37.0 41.0 34.0 41.0 18 38.23302535562613 40.0 37.0 41.0 34.0 41.0 19 38.14047274465078 40.0 37.0 41.0 34.0 41.0 20 38.122394023921935 40.0 37.0 41.0 34.0 41.0 21 38.10195124100555 40.0 37.0 41.0 34.0 41.0 22 38.1376053659975 40.0 37.0 41.0 34.0 41.0 23 38.13068434092658 40.0 37.0 41.0 34.0 41.0 24 38.10665055602065 40.0 36.0 41.0 34.0 41.0 25 37.97197866073759 40.0 36.0 41.0 34.0 41.0 26 37.941493273861774 40.0 36.0 41.0 34.0 41.0 27 37.940157875292755 40.0 36.0 41.0 34.0 41.0 28 37.81055812203645 40.0 36.0 41.0 33.0 41.0 29 37.75530176957257 40.0 36.0 41.0 33.0 41.0 30 37.66622492314679 40.0 36.0 41.0 33.0 41.0 31 37.5730859569622 40.0 36.0 41.0 33.0 41.0 32 37.50867500669394 40.0 36.0 41.0 33.0 41.0 33 37.353102768071096 40.0 35.0 41.0 33.0 41.0 34 37.25405788308823 40.0 35.0 41.0 32.0 41.0 35 37.2279447402582 40.0 35.0 41.0 32.0 41.0 36 37.05134166884149 39.0 35.0 41.0 32.0 41.0 37 37.030078666499456 39.0 35.0 41.0 32.0 41.0 38 36.93680751619255 39.0 35.0 41.0 32.0 41.0 39 36.8894364550252 39.0 35.0 41.0 32.0 41.0 40 36.8033778127256 39.0 35.0 41.0 31.0 41.0 41 36.63199940347678 39.0 35.0 41.0 31.0 41.0 42 36.659769931840444 39.0 35.0 41.0 31.0 41.0 43 36.500681256630386 39.0 35.0 41.0 31.0 41.0 44 36.43579918859285 39.0 35.0 41.0 31.0 41.0 45 36.428817155465474 39.0 35.0 41.0 31.0 41.0 46 36.321868337835504 38.0 35.0 40.0 31.0 41.0 47 36.17841467175971 38.0 35.0 40.0 30.0 41.0 48 36.128671075063636 38.0 35.0 40.0 30.0 41.0 49 36.13749012855753 38.0 35.0 40.0 30.0 41.0 50 35.98063672074918 38.0 35.0 40.0 30.0 41.0 51 34.83358527401091 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 9.0 10 12.0 11 17.0 12 9.0 13 9.0 14 18.0 15 30.0 16 40.0 17 47.0 18 150.0 19 272.0 20 514.0 21 898.0 22 1351.0 23 1776.0 24 2478.0 25 3150.0 26 4006.0 27 4830.0 28 5574.0 29 6700.0 30 8647.0 31 11126.0 32 15228.0 33 21261.0 34 38124.0 35 49533.0 36 45367.0 37 67336.0 38 115801.0 39 185623.0 40 145.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.956836800059655 17.58760587439797 21.380612317526598 16.07494500801578 2 28.992553627776292 27.18434262124504 25.492046921974087 18.331056829004584 3 31.01954630342018 27.096219873035455 25.861654063983895 16.02257975956047 4 27.626989964174715 24.85739366804161 28.719881508797023 18.795734858986656 5 26.604935551767028 29.998678158776855 24.447114488396608 18.949271801059506 6 25.888938222564168 35.1857186918517 23.70027419732039 15.225068888263745 7 76.66746880963113 6.0730130862281095 12.19110434750189 5.068413756638863 8 76.84100283687462 7.562626464617021 9.470653430177974 6.125717268330379 9 70.69139074643357 6.912721196571347 12.420901360140725 9.974986696854357 10 39.250380453018714 26.531556417200203 18.033812020620722 16.18425110916036 11 30.875838437109167 24.74774863325007 25.648803733693054 18.727609195947707 12 27.6846086841579 20.924916029188967 29.794809570130454 21.595665716522678 13 25.34901692295699 23.781957206237735 32.37680609267124 18.492219778134032 14 20.43159810603878 28.674125466457433 29.273360154282596 21.62091627322119 15 18.740319207708705 24.454232094982764 36.433502913134696 20.371945784173832 16 21.958663652416767 24.292391278559396 30.016472175242253 23.732472893781583 17 22.148127561067373 24.52795016319655 28.323329141853897 25.00059313388218 18 24.69521391797128 22.727704097368857 29.862765766345923 22.71431621831394 19 23.60757584487685 25.545090037723316 27.277549374159022 23.569784743240817 20 25.418159386936818 25.400365370471423 28.553804021786654 20.6276712208051 21 24.20223492846805 27.5881820615978 28.224360516941598 19.985222492992545 22 22.97190579000349 23.49843921055575 28.127594960734537 25.40206003870622 23 20.91085028284013 27.48124849598194 27.944231857729214 23.663669363448715 24 22.498076551553503 23.86414861562552 28.91053168521199 24.727243147608995 25 21.36942750717692 28.095735197920302 26.824056154526627 23.71078114037615 26 20.779174560996193 25.8184400239965 28.079635849689705 25.322749565317597 27 23.868046352565557 25.168365289127347 27.16892114030836 23.794667217998732 28 19.928790040773716 26.838799768169388 29.270648685106913 23.96176150594998 29 21.658876841680705 26.373952271363837 28.01439112264992 23.952779764305543 30 25.033300230813815 26.002142060648787 27.716637913795616 21.247919794741783 31 26.02247807946638 26.360055991838475 24.678436702446763 22.93902922624838 32 25.443071009988376 27.207390109238318 26.365139996542876 20.984398884230433 33 25.76675264283511 24.342214524662506 26.313961015851927 23.577071816650456 34 25.41697311917246 25.77742905271435 27.59970580559444 21.205892022518753 35 25.477642241978288 25.089563216209164 26.790840657124555 22.641953884687997 36 26.35802238995672 27.58021712089424 26.503933324972973 19.55782716417607 37 25.09312201950224 25.380876685771227 29.138295095969063 20.387706198757467 38 24.3862758987673 27.267889765220666 26.421064048291264 21.924770287720776 39 25.73607914778524 22.592808505878804 28.857827503109718 22.813284843226242 40 28.552787220845776 22.313018780313378 27.704775236152017 21.42941876268883 41 24.17020569883034 24.130889395782987 27.180444884305 24.518460021081673 42 24.724362211609833 23.70179939873171 28.991197893188453 22.582640496470006 43 24.308321159966514 23.631131733340563 29.023735523296608 23.036811583396318 44 23.847201933277525 23.748063841541743 28.402300681595566 24.002433543585173 45 23.165267435594135 22.494517748260424 28.031676738644872 26.308538077500565 46 26.462075019573415 23.727388889077186 27.164345536074403 22.646190555274995 47 22.635514145395756 23.9793860555919 31.482699131990934 21.902400667021418 48 22.98309060035317 24.22731601834309 28.53617947214474 24.253413909159004 49 23.75636771589226 21.68971980355406 31.75520178414672 22.798710696406964 50 23.191873726880488 22.314035581254256 30.19441233989622 24.299678351969035 51 22.450456374155632 22.389278850879364 27.17264941042492 27.987615364540087 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 205.0 1 539.0 2 873.0 3 1524.0 4 2175.0 5 1549.5 6 924.0 7 908.5 8 893.0 9 937.0 10 981.0 11 973.5 12 966.0 13 997.0 14 1028.0 15 1097.5 16 1167.0 17 1134.5 18 1102.0 19 1202.0 20 1302.0 21 1256.5 22 1211.0 23 1550.0 24 1889.0 25 2079.5 26 3083.5 27 3897.0 28 4596.5 29 5296.0 30 6193.0 31 7090.0 32 8504.5 33 9919.0 34 11745.0 35 13571.0 36 14732.5 37 15894.0 38 16704.5 39 17515.0 40 20038.5 41 22562.0 42 25721.5 43 28881.0 44 33973.5 45 39066.0 46 53259.5 47 67453.0 48 64561.5 49 61670.0 50 61362.0 51 61054.0 52 53018.5 53 44983.0 54 40200.5 55 35418.0 56 33262.0 57 31106.0 58 28709.0 59 26312.0 60 23999.5 61 21687.0 62 19553.0 63 17419.0 64 15424.5 65 13430.0 66 11345.0 67 9260.0 68 8168.5 69 7077.0 70 5888.0 71 4699.0 72 4191.5 73 3684.0 74 2883.0 75 1628.5 76 1175.0 77 853.0 78 531.0 79 377.0 80 223.0 81 148.0 82 73.0 83 60.0 84 47.0 85 29.0 86 11.0 87 9.0 88 7.0 89 5.0 90 3.0 91 3.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 590086.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.266171529406115 #Duplication Level Percentage of deduplicated Percentage of total 1 73.65856267222762 24.50338380463834 2 10.343741517057154 6.881933591245254 3 3.7408345525950932 3.733297316692726 4 1.9544732480092881 2.600713692716499 5 1.2215770583250887 2.031859597931487 6 0.8750276208678878 1.7465291357255572 7 0.7219684215623965 1.6811987745356485 8 0.6162465882954662 1.6400131768518629 9 0.485645330824234 1.4540004789888732 >10 6.191568613189302 43.62695406434298 >50 0.13713702432386674 2.896374422307307 >100 0.04656518363232869 2.723596283096862 >500 0.002558526573204873 0.6020850033321001 >1k 0.004093642517127797 3.8780606575945447 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGC 4784 0.8107292835281638 No Hit GAATCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTC 4614 0.7819199235365693 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCG 4459 0.7556525658971743 No Hit GCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 2818 0.4775575085665479 No Hit CCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 2552 0.43247933352087664 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1223 0.20725792511600005 No Hit CTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGCT 1195 0.20251285405856095 Illumina Single End Adapter 1 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCT 1137 0.19268377829672284 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCT 886 0.15014760560325105 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTC 691 0.11710157502465741 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGATGGGTT 675 0.11439010584897795 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTA 648 0.10981450161501882 No Hit TCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 637 0.10795036655673919 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6946682347996733E-4 0.0 0.0 0.2204763373474375 0.0 2 1.6946682347996733E-4 0.0 0.0 1.3857302155956928 0.0 3 1.6946682347996733E-4 0.0 0.0 1.8473578427551238 0.0 4 1.6946682347996733E-4 0.0 0.0 2.5547123639605074 0.0 5 1.6946682347996733E-4 0.0 0.0 4.659659778405182 0.0 6 1.6946682347996733E-4 0.0 0.0 5.930322020857977 0.0 7 1.6946682347996733E-4 0.0 0.0 7.046430520297042 0.0 8 1.6946682347996733E-4 0.0 0.0 8.641452262890494 0.0 9 1.6946682347996733E-4 0.0 0.0 9.291526997759648 0.0 10 1.6946682347996733E-4 0.0 0.0 11.287168311059744 0.0 11 1.6946682347996733E-4 0.0 0.0 12.691878810885193 0.0 12 1.6946682347996733E-4 0.0 0.0 14.78309941262799 0.0 13 1.6946682347996733E-4 0.0 0.0 15.362337015282518 0.0 14 1.6946682347996733E-4 0.0 0.0 15.635348067908746 0.0 15 1.6946682347996733E-4 0.0 0.0 16.13934240093817 0.0 16 1.6946682347996733E-4 0.0 0.0 16.890249895777902 0.0 17 3.3893364695993466E-4 0.0 0.0 17.758258965642295 0.0 18 3.3893364695993466E-4 0.0 0.0 18.813189941805092 0.0 19 3.3893364695993466E-4 0.0 0.0 19.51241005548344 0.0 20 3.3893364695993466E-4 0.0 0.0 20.143335039299355 0.0 21 3.3893364695993466E-4 0.0 0.0 20.821032866395747 0.0 22 3.3893364695993466E-4 0.0 0.0 21.51957511278017 0.0 23 3.3893364695993466E-4 0.0 0.0 22.166260511179726 0.0 24 3.3893364695993466E-4 0.0 0.0 22.710587948197382 0.0 25 3.3893364695993466E-4 0.0 0.0 23.206786807346727 0.0 26 3.3893364695993466E-4 0.0 0.0 23.674515240151436 0.0 27 3.3893364695993466E-4 0.0 0.0 24.202743328938492 0.0 28 3.3893364695993466E-4 0.0 0.0 24.677928301976323 0.0 29 3.3893364695993466E-4 0.0 0.0 25.190565443003223 0.0 30 3.3893364695993466E-4 0.0 0.0 25.88520995244761 0.0 31 3.3893364695993466E-4 0.0 0.0 26.391746287829232 0.0 32 3.3893364695993466E-4 0.0 0.0 26.914043037794492 0.0 33 3.3893364695993466E-4 0.0 0.0 27.404818958592475 0.0 34 3.3893364695993466E-4 0.0 0.0 27.889494073745183 0.0 35 3.3893364695993466E-4 0.0 0.0 28.446362055700355 0.0 36 3.3893364695993466E-4 0.0 0.0 28.919174493209464 0.0 37 3.3893364695993466E-4 0.0 0.0 29.41486495188837 0.0 38 3.3893364695993466E-4 0.0 0.0 29.912250078802074 0.0 39 5.08400470439902E-4 0.0 0.0 30.532329185915273 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAACGTT 20 7.0304924E-4 45.0 30 GAACGTA 20 7.0304924E-4 45.0 1 CTATTCG 20 7.0304924E-4 45.0 26 TTACGTC 20 7.0304924E-4 45.0 18 CGGTCTA 40 6.8048394E-9 45.0 31 ACTCAAC 20 7.0304924E-4 45.0 39 CAATAGA 40 6.8048394E-9 45.0 12 CGTAAGG 90 0.0 40.0 2 ATTAGCG 40 3.4544064E-7 39.375 1 GCGATAC 40 3.4544064E-7 39.375 9 CGGGCTC 110 0.0 38.86364 6 TTGCACG 35 6.243121E-6 38.57143 1 CCCGCAT 35 6.243121E-6 38.57143 42 ACACGGT 30 1.1392485E-4 37.500004 36 GCGCGAA 30 1.1392485E-4 37.500004 12 AGTTACG 30 1.1392485E-4 37.500004 1 CGATACG 30 1.1392485E-4 37.500004 10 TCGCAGG 55 2.744855E-9 36.818184 2 TACGGCT 695 0.0 36.582733 7 AGGGCGC 125 0.0 36.000004 6 >>END_MODULE