##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935738.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1413544 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01344351502323 33.0 31.0 34.0 30.0 34.0 2 32.04311432824164 33.0 31.0 34.0 30.0 34.0 3 32.07590142224083 33.0 31.0 34.0 30.0 34.0 4 35.74198256297646 37.0 35.0 37.0 33.0 37.0 5 34.80738908728699 37.0 35.0 37.0 33.0 37.0 6 35.294344569394376 37.0 35.0 37.0 33.0 37.0 7 35.88633675357824 37.0 35.0 37.0 35.0 37.0 8 35.87338774031795 37.0 35.0 37.0 35.0 37.0 9 37.7052189390638 39.0 38.0 39.0 35.0 39.0 10 37.287924535776746 39.0 37.0 39.0 34.0 39.0 11 37.26313294810773 39.0 37.0 39.0 34.0 39.0 12 37.34051504587052 39.0 37.0 39.0 34.0 39.0 13 37.355768196815944 39.0 37.0 39.0 34.0 39.0 14 38.5391017188004 40.0 38.0 41.0 34.0 41.0 15 38.58675004103162 40.0 38.0 41.0 34.0 41.0 16 38.59499881149791 40.0 38.0 41.0 34.0 41.0 17 38.539016825793894 40.0 38.0 41.0 34.0 41.0 18 38.49382474121782 40.0 38.0 41.0 34.0 41.0 19 38.41580240869757 40.0 38.0 41.0 34.0 41.0 20 38.39848211304353 40.0 38.0 41.0 34.0 41.0 21 38.360098447589884 40.0 38.0 41.0 34.0 41.0 22 38.41883804112217 40.0 38.0 41.0 34.0 41.0 23 38.40510447499335 40.0 38.0 41.0 34.0 41.0 24 38.38047772124532 40.0 38.0 41.0 34.0 41.0 25 38.24321209668747 40.0 37.0 41.0 34.0 41.0 26 38.28682800110927 40.0 37.0 41.0 34.0 41.0 27 38.29070478174008 40.0 38.0 41.0 34.0 41.0 28 38.149985426700546 40.0 37.0 41.0 34.0 41.0 29 38.09022570220665 40.0 37.0 41.0 34.0 41.0 30 37.98644329430142 40.0 37.0 41.0 33.0 41.0 31 37.98249718438195 40.0 37.0 41.0 34.0 41.0 32 37.930147911915014 40.0 37.0 41.0 33.0 41.0 33 37.79814706864448 40.0 37.0 41.0 33.0 41.0 34 37.73126835811266 40.0 37.0 41.0 33.0 41.0 35 37.68756685324263 40.0 37.0 41.0 33.0 41.0 36 37.62800450498888 40.0 37.0 41.0 33.0 41.0 37 37.60783534152456 40.0 37.0 41.0 33.0 41.0 38 37.53673178903522 40.0 37.0 41.0 33.0 41.0 39 37.4546989693989 40.0 37.0 41.0 33.0 41.0 40 37.35970864720164 40.0 37.0 41.0 32.0 41.0 41 37.25777902916358 40.0 36.0 41.0 32.0 41.0 42 37.29057744223031 40.0 36.0 41.0 32.0 41.0 43 37.19966198434573 40.0 36.0 41.0 32.0 41.0 44 37.11324090371435 40.0 36.0 41.0 31.0 41.0 45 37.101070783788835 40.0 36.0 41.0 31.0 41.0 46 36.9634344597692 40.0 36.0 41.0 31.0 41.0 47 36.879192299638355 39.0 35.0 41.0 31.0 41.0 48 36.84153446939041 39.0 35.0 41.0 31.0 41.0 49 36.81712490025072 39.0 35.0 41.0 31.0 41.0 50 36.699030946330645 39.0 35.0 41.0 31.0 41.0 51 35.558136145744314 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 19.0 10 25.0 11 20.0 12 26.0 13 20.0 14 28.0 15 37.0 16 57.0 17 97.0 18 225.0 19 469.0 20 961.0 21 1620.0 22 2689.0 23 4059.0 24 5781.0 25 8209.0 26 10628.0 27 12122.0 28 12884.0 29 14754.0 30 17857.0 31 23406.0 32 31114.0 33 41895.0 34 66788.0 35 87533.0 36 96223.0 37 146272.0 38 275285.0 39 552060.0 40 375.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.90134866689682 18.067566343884593 22.435523761552524 17.595561227666064 2 28.16396235278138 27.69259393411171 26.901815578432647 17.241628134674265 3 29.90235889367434 26.26596695964186 28.07708850944859 15.754585637235206 4 26.283440770149358 25.007215905553696 30.68620432048808 18.023139003808865 5 25.32690881925147 30.620765961300105 25.901705217524178 18.150620001924242 6 24.719711590159203 34.93743385419909 25.76198547763635 14.580869078005353 7 79.69090456328207 4.672723311053635 11.28468586757823 4.351686258086059 8 80.8822364213636 5.706861618739848 8.470128980774563 4.94077297912198 9 74.09001771434069 6.859567158857454 10.999869830723345 8.050545296078509 10 32.64065356295948 35.17173855217807 18.006938588399088 14.180669296463359 11 23.414057149971985 26.730331705274118 31.24225351315559 18.61335763159831 12 21.070373472633324 22.985418211247758 34.55789137090887 21.386316945210055 13 21.805759141561918 24.59590928899277 36.26126954661475 17.33706202283056 14 19.55220353947242 29.309169010656905 31.205749520354516 19.932877929516167 15 17.869341173674115 27.01026639425444 36.39179254413021 18.72859988794123 16 20.59907579813575 27.852051298014068 30.405703678130998 21.143169225719184 17 21.261453481462198 26.423372742553468 30.267964775061827 22.047209000922503 18 22.3751789827554 25.156344620330177 31.229731794694754 21.23874460221967 19 20.86224411832953 28.462149038162238 29.198171404639684 21.477435438868547 20 21.239664276456903 27.749684480992453 30.90791655583413 20.10273468671651 21 21.33106574680378 29.376871183351916 30.479631337970375 18.81243173187393 22 20.059156276705924 25.411377360733024 30.683516041948465 23.845950320612587 23 18.572538244299437 28.637806817474377 30.338850435501126 22.450804502725067 24 19.617075945283627 26.153766702699034 30.763881421448502 23.46527593056884 25 18.6134991199425 30.341538714040738 28.924532946975827 22.120429219040936 26 19.299010147544045 27.271666110145848 30.564099879451927 22.865223862858176 27 21.467672743119422 26.729058310176406 28.817214037907558 22.986054908796614 28 18.85077507314947 26.66736939210948 32.043006797100055 22.438848737640992 29 20.1533875139366 24.37780500642357 31.87633352764399 23.592473951995835 30 21.551363098707927 25.815963280944914 30.49201156808702 22.140662052260137 31 20.84144533173357 25.83952109025259 28.54873990480664 24.7702936732072 32 20.639612208746243 26.3246846224808 30.91470799635526 22.120995172417697 33 19.840415296587867 24.493118006938587 29.82121532828126 25.84525136819229 34 18.86570209346154 24.197619600097344 31.372988743187335 25.563689563253778 35 19.213480443481064 24.203420622209144 32.553638231282505 24.029460703027283 36 19.123776833264476 24.535069300990983 32.3833570090496 23.957796856694948 37 19.428189005789704 24.748716700718195 32.91301862552563 22.910075667966474 38 18.28354830129094 25.064801661639112 31.01700406920478 25.634645967865165 39 20.02470386489561 23.48692364722994 32.12252324653495 24.3658492413395 40 20.32444692206256 23.412854499046368 32.907076115069636 23.35562246382143 41 18.568293593973728 24.73287000616889 31.55020289428557 25.14863350557181 42 20.12381645000085 24.21155620200008 33.507128182780306 22.15749916521877 43 20.925489408182553 24.170312349668635 32.00699801350365 22.897200228645165 44 20.104149570158413 24.13380835686756 30.386814984181605 25.375227088792425 45 19.56734279230077 23.28367564080071 30.05643970049747 27.092541866401042 46 22.21699501395075 24.171444256422156 29.85743634439395 23.754124385233144 47 19.05565019553689 23.215902723933603 33.38969285710243 24.338754223427074 48 19.642473103065768 23.68698816591489 31.475426304381042 25.195112426638293 49 20.25674474936755 21.989835477353374 33.932654377932344 23.820765395346733 50 19.795917212340047 22.19110264696394 32.91804146174438 25.094938678951628 51 19.534376008104452 21.711740136847528 30.375708149162673 28.37817570588535 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 245.0 1 692.0 2 1139.0 3 4272.5 4 7406.0 5 5196.5 6 2987.0 7 2876.5 8 2766.0 9 2936.5 10 3107.0 11 3071.5 12 3036.0 13 3108.0 14 3180.0 15 3075.5 16 2971.0 17 3006.5 18 3042.0 19 3280.0 20 3518.0 21 3964.0 22 4410.0 23 5551.5 24 6693.0 25 7604.5 26 10619.0 27 12722.0 28 15932.5 29 19143.0 30 23150.5 31 27158.0 32 31150.5 33 35143.0 34 39154.0 35 43165.0 36 47932.0 37 52699.0 38 58423.0 39 64147.0 40 69744.0 41 75341.0 42 83024.0 43 90707.0 44 101269.0 45 111831.0 46 146251.5 47 180672.0 48 172062.0 49 163452.0 50 156908.0 51 150364.0 52 126675.0 53 102986.0 54 87736.0 55 72486.0 56 61753.0 57 51020.0 58 44084.5 59 37149.0 60 32143.0 61 27137.0 62 22283.0 63 17429.0 64 14260.0 65 11091.0 66 8641.5 67 6192.0 68 4907.5 69 3623.0 70 2680.5 71 1738.0 72 1565.5 73 1393.0 74 1045.0 75 596.5 76 496.0 77 407.0 78 318.0 79 227.5 80 137.0 81 89.0 82 41.0 83 31.5 84 22.0 85 15.5 86 9.0 87 7.0 88 5.0 89 6.0 90 7.0 91 4.5 92 2.0 93 2.5 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1413544.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.27412960406201 #Duplication Level Percentage of deduplicated Percentage of total 1 72.62617113479705 23.439464598512274 2 10.519354358830014 6.790060118558691 3 4.031373253345087 3.903271885824253 4 2.1587134021512617 2.7868238447622184 5 1.3980119412701981 2.2559809290290356 6 1.028284659824431 1.9912195428625503 7 0.7534197130190498 1.7021175824962413 8 0.6412362254437751 1.6556272837433539 9 0.5445409857071213 1.5817127712691776 >10 5.98998272343751 41.04046500247113 >50 0.2574805802006046 5.105027953794644 >100 0.045393467779391995 2.536891448847021 >500 0.002683357419795396 0.6249851647639275 >1k 0.002459744301479113 1.8927091144455848 >5k 6.70839354948849E-4 1.6487772602998485 >10k+ 2.23613118316283E-4 1.0448654983201089 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTC 14478 1.0242341235928984 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGC 8951 0.6332310844232653 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCG 8257 0.5841346289892638 No Hit GCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTGC 5638 0.3988556422721896 TruSeq Adapter, Index 19 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCT 4656 0.32938486527479865 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4090 0.2893436638689705 No Hit CCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTGC 3722 0.26330980853797264 TruSeq Adapter, Index 19 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTGCT 2534 0.17926573208899052 TruSeq Adapter, Index 16 (95% over 23bp) GAATGCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTT 2143 0.1516047607998053 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCT 2095 0.1482090405392404 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTC 1861 0.13165490426898632 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.659533767608224E-4 0.0 0.0 0.19008959041954124 0.0 2 5.659533767608224E-4 0.0 0.0 1.0325111917280254 0.0 3 5.659533767608224E-4 0.0 0.0 1.4767138483131759 0.0 4 5.659533767608224E-4 0.0 0.0 2.3053403360631153 0.0 5 5.659533767608224E-4 0.0 0.0 4.462683864103275 0.0 6 5.659533767608224E-4 0.0 0.0 5.938195061490834 0.0 7 5.659533767608224E-4 0.0 0.0 7.0716581867985715 0.0 8 5.659533767608224E-4 0.0 0.0 8.8596463923302 0.0 9 5.659533767608224E-4 0.0 0.0 9.624956846055023 0.0 10 6.366975488559252E-4 0.0 0.0 11.542123909832307 0.0 11 6.366975488559252E-4 0.0 0.0 12.879613227462322 0.0 12 6.366975488559252E-4 0.0 0.0 14.913366686852337 0.0 13 6.366975488559252E-4 0.0 0.0 15.621798826212697 0.0 14 7.074417209510281E-4 0.0 0.0 15.963493177432044 0.0 15 7.074417209510281E-4 0.0 0.0 16.415053227915084 0.0 16 7.074417209510281E-4 0.0 0.0 17.08860849043256 0.0 17 7.074417209510281E-4 0.0 0.0 17.952041110853287 0.0 18 7.074417209510281E-4 0.0 0.0 18.990777789725684 0.0 19 7.074417209510281E-4 0.0 0.0 19.696167929685952 0.0 20 7.074417209510281E-4 0.0 0.0 20.29961571765718 0.0 21 7.074417209510281E-4 0.0 0.0 20.984843768570347 0.0 22 7.074417209510281E-4 0.0 0.0 21.75072017567193 0.0 23 7.074417209510281E-4 0.0 0.0 22.473654870311783 0.0 24 7.074417209510281E-4 0.0 0.0 23.033382759928237 0.0 25 7.074417209510281E-4 0.0 0.0 23.552362006417912 0.0 26 7.074417209510281E-4 0.0 0.0 24.051391396376765 0.0 27 7.074417209510281E-4 0.0 0.0 24.613949052877025 0.0 28 7.074417209510281E-4 0.0 0.0 25.13349425274346 0.0 29 7.074417209510281E-4 0.0 0.0 25.708927348565027 0.0 30 7.074417209510281E-4 0.0 0.0 26.464899571573294 0.0 31 7.781858930461309E-4 0.0 0.0 27.055471920223212 0.0 32 8.489300651412337E-4 0.0 0.0 27.63621082895191 0.0 33 8.489300651412337E-4 0.0 0.0 28.209804576299003 0.0 34 8.489300651412337E-4 0.0 0.0 28.787147764767138 0.0 35 8.489300651412337E-4 0.0 0.0 29.371706858788972 0.0 36 9.196742372363365E-4 0.0 0.0 29.90278335870691 0.0 37 9.196742372363365E-4 0.0 0.0 30.42933223161076 0.0 38 9.196742372363365E-4 0.0 0.0 30.974699054291907 0.0 39 9.904184093314393E-4 0.0 0.0 31.5786420514678 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTGCGA 20 7.033837E-4 45.0 14 CCGCTAG 20 7.033837E-4 45.0 1 CGGATCG 20 7.033837E-4 45.0 2 CGAATAC 20 7.033837E-4 45.0 44 TTACGCG 20 7.033837E-4 45.0 1 ACCGTAG 20 7.033837E-4 45.0 42 TCGCGCA 20 7.033837E-4 45.0 34 CGTTTTT 2820 0.0 41.010635 1 GCCGATT 90 0.0 40.0 9 TACGCGG 85 0.0 39.705883 2 CGACCGG 40 3.458972E-7 39.375 2 TACGAAG 40 3.458972E-7 39.375 1 TGTTACG 80 0.0 39.375 1 ACGCTAG 40 3.458972E-7 39.375 1 CGTAAGG 200 0.0 39.375 2 CGAACGG 75 0.0 39.0 2 CTGTACG 75 0.0 39.0 1 ACTTCGA 35 6.2493073E-6 38.57143 29 GTAATCG 35 6.2493073E-6 38.57143 1 TTACGAG 35 6.2493073E-6 38.57143 1 >>END_MODULE