##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935737.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 682579 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.137956192616535 33.0 31.0 34.0 30.0 34.0 2 32.173686855294406 33.0 31.0 34.0 30.0 34.0 3 32.20531396365842 34.0 31.0 34.0 30.0 34.0 4 35.839765067486695 37.0 35.0 37.0 35.0 37.0 5 34.93926124302095 37.0 35.0 37.0 33.0 37.0 6 35.39763162945241 37.0 35.0 37.0 33.0 37.0 7 35.94691749965938 37.0 35.0 37.0 35.0 37.0 8 35.92654037115118 37.0 35.0 37.0 35.0 37.0 9 37.76171988883338 39.0 38.0 39.0 35.0 39.0 10 37.440286032825504 39.0 37.0 39.0 35.0 39.0 11 37.381249642898474 39.0 37.0 39.0 35.0 39.0 12 37.272415354120184 39.0 37.0 39.0 34.0 39.0 13 37.21155646452645 39.0 37.0 39.0 34.0 39.0 14 38.28017855808632 40.0 38.0 41.0 33.0 41.0 15 38.386195590547025 40.0 38.0 41.0 34.0 41.0 16 38.4173524236755 40.0 38.0 41.0 34.0 41.0 17 38.383189345116094 40.0 38.0 41.0 34.0 41.0 18 38.35743408455285 40.0 37.0 41.0 34.0 41.0 19 38.24868916271963 40.0 37.0 41.0 34.0 41.0 20 38.23793143357765 40.0 37.0 41.0 34.0 41.0 21 38.15520254798346 40.0 37.0 41.0 34.0 41.0 22 38.20207624318943 40.0 37.0 41.0 34.0 41.0 23 38.191199846464656 40.0 37.0 41.0 34.0 41.0 24 38.1505378864571 40.0 37.0 41.0 34.0 41.0 25 37.9913270112324 40.0 36.0 41.0 34.0 41.0 26 38.013550079917486 40.0 36.0 41.0 34.0 41.0 27 38.01063027136786 40.0 36.0 41.0 34.0 41.0 28 37.88569235209404 40.0 36.0 41.0 34.0 41.0 29 37.838322011078574 40.0 36.0 41.0 33.0 41.0 30 37.711788672080445 40.0 36.0 41.0 33.0 41.0 31 37.65006101857807 40.0 36.0 41.0 33.0 41.0 32 37.569684974193464 40.0 36.0 41.0 33.0 41.0 33 37.417777282922565 40.0 35.0 41.0 33.0 41.0 34 37.312379958949805 40.0 35.0 41.0 33.0 41.0 35 37.23455600011134 40.0 35.0 41.0 32.0 41.0 36 37.15330386665866 40.0 35.0 41.0 32.0 41.0 37 37.10062278505492 40.0 35.0 41.0 32.0 41.0 38 36.98804680483871 39.0 35.0 41.0 32.0 41.0 39 36.89516231820786 39.0 35.0 41.0 31.0 41.0 40 36.75645163416982 39.0 35.0 41.0 31.0 41.0 41 36.637568691682574 39.0 35.0 41.0 31.0 41.0 42 36.63875683254246 39.0 35.0 41.0 31.0 41.0 43 36.551941973017044 39.0 35.0 41.0 31.0 41.0 44 36.43143138010399 39.0 35.0 41.0 31.0 41.0 45 36.36223059894898 39.0 35.0 41.0 31.0 41.0 46 36.23564744886672 38.0 35.0 41.0 30.0 41.0 47 36.11902651561211 38.0 35.0 40.0 30.0 41.0 48 36.04519769872791 38.0 35.0 40.0 30.0 41.0 49 36.00585426741813 38.0 35.0 40.0 30.0 41.0 50 35.87057029296243 38.0 35.0 40.0 30.0 41.0 51 34.70856706696221 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 19.0 10 11.0 11 14.0 12 14.0 13 17.0 14 16.0 15 25.0 16 50.0 17 85.0 18 162.0 19 295.0 20 566.0 21 944.0 22 1362.0 23 2028.0 24 2852.0 25 3970.0 26 5298.0 27 6204.0 28 6984.0 29 8114.0 30 10116.0 31 12564.0 32 16479.0 33 23496.0 34 42665.0 35 52022.0 36 50445.0 37 77177.0 38 131032.0 39 227366.0 40 182.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.90375180015793 17.359162822178824 21.04840611855917 18.688679259104074 2 29.909211973998612 25.49800096399098 26.256008462024177 18.33677859998623 3 32.53542813359333 24.947881490640643 26.338929266795493 16.177761108970536 4 28.330786619570773 25.417570713426578 27.215604347628624 19.036038319374022 5 25.347102679689826 30.380952241425536 25.198108936841013 19.073836142043632 6 26.043139328927495 33.65793556496757 25.33684745648489 14.962077649620046 7 79.33147664958928 5.89543481413873 9.997377592923309 4.775710943348682 8 80.52415910832299 5.608435067589246 8.849818116291301 5.01758770779646 9 74.0645405147243 7.039038704677407 11.722892148747617 7.1735286318506715 10 39.31383766567679 27.531904731906494 17.639862931616708 15.51439467080001 11 30.51441664627831 24.97835415387816 25.45566154247347 19.051567657370065 12 26.24077213040542 22.347596395435545 30.546793850968168 20.86483762319087 13 25.357504406083397 23.146624786288474 32.04112637511555 19.454744432512573 14 21.432683982366875 25.84155094135624 31.63238247880465 21.093382597472235 15 20.45111261846614 23.777174510203213 34.811062162767975 20.96065070856267 16 24.80811744867627 24.110176257986254 29.7123116884639 21.369394604873577 17 24.39937355236537 24.36333376795946 28.155861812332343 23.081430867342828 18 26.83117998063228 22.607932561652206 29.094507741961007 21.466379715754513 19 24.788925530964182 26.277544430754535 26.86663375228362 22.066896285997665 20 25.619012597809192 26.425366148094216 27.101478363676584 20.85414289042001 21 25.10844898539217 26.662701313694093 28.382648748350007 19.846200952563734 22 24.01421666942581 23.599905651946514 28.749639235897966 23.636238442729706 23 22.527062801521875 25.73475011683629 28.806921982656952 22.93126509898488 24 23.00905829215373 24.56301761407837 29.339021563804334 23.088902529963566 25 23.7005533425435 26.427270689546557 26.839823668762154 23.03235229914779 26 23.004516693305828 24.878731985601664 27.23626129722713 24.88049002386537 27 22.84350968898838 23.971291235153732 28.673750584181462 24.511448491676422 28 21.275632564142757 25.919783644091016 28.93320773126627 23.87137606049996 29 22.51827261020336 25.19254181567262 27.61922063233706 24.669964941786958 30 23.632136353447734 23.77600248469408 30.140540508864177 22.45132065299401 31 24.97981918576458 23.726484406933118 28.561236135304487 22.73246027199782 32 25.437934656647805 23.746115834211132 27.745799387323665 23.070150121817402 33 24.320408333687382 23.734688585497064 28.296358370239926 23.648544710575624 34 22.19201000909785 23.936716482634242 30.213645599996486 23.657627908271422 35 23.141350671497367 25.143609750666222 28.638003806152838 23.077035771683573 36 24.068129842846027 26.361490757846344 27.95456643113837 21.61581296816925 37 23.195996360860793 26.502866334885777 27.695402290430852 22.605735013822574 38 23.485193655239904 26.740641010051586 28.35027154366015 21.42389379104836 39 23.85320966510836 24.5732728372833 27.1347345874983 24.43878291011004 40 25.274583601312084 23.664953067703518 28.848235881853967 22.21222744913043 41 21.541535851527808 25.206313115404953 27.92087069775074 25.331280335316496 42 22.99616601155324 24.87887848879031 28.60445457595385 23.520500923702603 43 22.67371249335242 24.066371804582325 29.603020309737044 23.656895392328213 44 23.216946316836587 24.025643918139878 28.945220992734903 23.81218877228863 45 22.947819959301412 23.012427865492494 28.37122149963594 25.668530675570157 46 23.864783417011072 23.642391576652667 27.917647627600616 24.57517737873565 47 21.80201852093311 24.833902009877246 30.017624333593623 23.346455135596024 48 22.233323908294864 24.84269220119576 29.321294677978667 23.602689212530713 49 23.33605340920245 23.664660061326234 29.318071607828543 23.68121492164277 50 21.554281628939652 23.893791048362168 30.55543753909804 23.99648978360014 51 21.58709834319544 22.772455642497057 28.563287179945473 27.07715883436203 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 212.0 1 535.0 2 858.0 3 2859.0 4 4860.0 5 3122.0 6 1384.0 7 1397.0 8 1410.0 9 1423.5 10 1437.0 11 1483.5 12 1530.0 13 1539.0 14 1548.0 15 1589.0 16 1630.0 17 1669.0 18 1708.0 19 1644.0 20 1580.0 21 1735.0 22 1890.0 23 2361.0 24 2832.0 25 3360.0 26 4402.0 27 4916.0 28 6087.5 29 7259.0 30 8506.0 31 9753.0 32 11337.5 33 12922.0 34 15262.0 35 17602.0 36 18888.0 37 20174.0 38 22026.0 39 23878.0 40 25705.5 41 27533.0 42 29934.0 43 32335.0 44 36331.0 45 40327.0 46 48735.0 47 57143.0 48 58983.5 49 60824.0 50 61328.5 51 61833.0 52 56845.5 53 51858.0 54 47400.0 55 42942.0 56 40187.5 57 37433.0 58 35447.5 59 33462.0 60 30945.5 61 28429.0 62 26499.5 63 24570.0 64 22285.0 65 20000.0 66 16963.0 67 13926.0 68 11908.5 69 9891.0 70 8322.0 71 6753.0 72 5449.0 73 4145.0 74 3453.5 75 2271.5 76 1781.0 77 1191.0 78 601.0 79 553.5 80 506.0 81 325.0 82 144.0 83 108.0 84 72.0 85 46.0 86 20.0 87 14.5 88 9.0 89 6.0 90 3.0 91 3.0 92 3.0 93 2.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 682579.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.293145589218035 #Duplication Level Percentage of deduplicated Percentage of total 1 72.5036187636598 24.863771540073465 2 8.864892110979763 6.080100715890789 3 3.474368483860802 3.574410727428877 4 2.0874725140011723 2.8634399534453276 5 1.531625516291435 2.626212840917171 6 1.214626467126495 2.4992017364211874 7 1.0743809671775264 2.5790732047992657 8 0.9128739905852661 2.504425653100079 9 0.8433803305024653 2.6029948014903486 >10 7.393829984549971 44.47356433676194 >50 0.06408999924610316 1.4641500680918285 >100 0.030539529794619973 1.8997369236102661 >500 0.001720536889837745 0.3815994581395884 >1k 0.0025808053347566176 1.5873180398299616 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3015 0.4417071137553309 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTC 2488 0.3644999333410492 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGC 1385 0.20290691626903262 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCG 1385 0.20290691626903262 No Hit GCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 1312 0.19221218349817384 No Hit CCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 1176 0.17228774984287534 No Hit GAACTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCT 717 0.10504278625624286 No Hit CTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGCT 692 0.10138020654019535 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.930063772838016E-4 0.0 0.0 0.11222144249969601 0.0 2 2.930063772838016E-4 0.0 0.0 0.5868917736994546 0.0 3 2.930063772838016E-4 0.0 0.0 0.9147659098800286 0.0 4 2.930063772838016E-4 0.0 0.0 1.342262214337095 0.0 5 2.930063772838016E-4 0.0 0.0 2.5156062521700786 0.0 6 2.930063772838016E-4 0.0 0.0 3.7088747236583606 0.0 7 2.930063772838016E-4 0.0 0.0 4.527095032223376 0.0 8 2.930063772838016E-4 0.0 0.0 5.868331724239978 0.0 9 2.930063772838016E-4 0.0 0.0 6.5377047931448224 0.0 10 2.930063772838016E-4 0.0 0.0 7.734928850726436 0.0 11 2.930063772838016E-4 0.0 0.0 8.71400966042026 0.0 12 2.930063772838016E-4 0.0 0.0 9.786852510844898 0.0 13 2.930063772838016E-4 0.0 0.0 10.23632429359825 0.0 14 2.930063772838016E-4 0.0 0.0 10.483914682403062 0.0 15 2.930063772838016E-4 0.0 0.0 10.777507072441432 0.0 16 2.930063772838016E-4 0.0 0.0 11.209544975746397 0.0 17 2.930063772838016E-4 0.0 0.0 11.70311421828096 0.0 18 2.930063772838016E-4 0.0 0.0 12.33586149002533 0.0 19 2.930063772838016E-4 0.0 0.0 12.704463512648353 0.0 20 2.930063772838016E-4 0.0 0.0 13.107933294168147 0.0 21 2.930063772838016E-4 0.0 0.0 13.491332138844001 0.0 22 2.930063772838016E-4 0.0 0.0 13.930109188826496 0.0 23 2.930063772838016E-4 0.0 0.0 14.365516665470224 0.0 24 2.930063772838016E-4 0.0 0.0 14.723130948945103 0.0 25 2.930063772838016E-4 0.0 0.0 15.067559945442213 0.0 26 2.930063772838016E-4 0.0 0.0 15.389280947699827 0.0 27 2.930063772838016E-4 0.0 0.0 15.769017212659634 0.0 28 2.930063772838016E-4 0.0 0.0 16.11007663581798 0.0 29 2.930063772838016E-4 0.0 0.0 16.487468849759516 0.0 30 2.930063772838016E-4 0.0 0.0 17.03348623382788 0.0 31 2.930063772838016E-4 0.0 0.0 17.410878447769417 0.0 32 2.930063772838016E-4 0.0 0.0 17.83427266294451 0.0 33 2.930063772838016E-4 0.0 0.0 18.217818010809005 0.0 34 2.930063772838016E-4 0.0 0.0 18.599312314032513 0.0 35 2.930063772838016E-4 0.0 0.0 19.01376983470045 0.0 36 2.930063772838016E-4 0.0 0.0 19.373142156439034 0.0 37 2.930063772838016E-4 0.0 0.0 19.74877633211687 0.0 38 2.930063772838016E-4 0.0 0.0 20.160157285823328 0.0 39 2.930063772838016E-4 0.0 0.0 20.791293022492635 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 1360 0.0 40.036762 1 ACGTAGG 80 0.0 39.375 2 AGGGCGA 635 0.0 38.622047 6 TTAACCG 35 6.2445597E-6 38.57143 1 AATCGAT 35 6.2445597E-6 38.57143 33 CGTTAGG 90 0.0 37.5 2 CGATTTA 30 1.1394364E-4 37.499996 10 TCAATCG 30 1.1394364E-4 37.499996 31 ACGTATG 30 1.1394364E-4 37.499996 1 AATAGCG 30 1.1394364E-4 37.499996 1 GCGTATG 60 1.546141E-10 37.499996 1 TACGTAG 30 1.1394364E-4 37.499996 1 CACGACC 255 0.0 37.058823 27 CTATGCG 55 2.746674E-9 36.81818 1 TTAACGG 55 2.746674E-9 36.81818 2 GTAGGGA 525 0.0 36.42857 4 TACGGGA 235 0.0 36.38298 4 CCCTAGG 25 0.0021065103 36.0 2 ATAGACG 25 0.0021065103 36.0 1 TATGCGT 25 0.0021065103 36.0 13 >>END_MODULE