##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935736.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 861327 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.095280886353265 33.0 31.0 34.0 30.0 34.0 2 32.1635221002012 33.0 31.0 34.0 30.0 34.0 3 32.15199686065803 33.0 31.0 34.0 30.0 34.0 4 35.819564462741795 37.0 35.0 37.0 35.0 37.0 5 34.950539110001195 37.0 35.0 37.0 33.0 37.0 6 35.377105327012856 37.0 35.0 37.0 33.0 37.0 7 35.91505665095835 37.0 35.0 37.0 35.0 37.0 8 35.88837108322391 37.0 35.0 37.0 35.0 37.0 9 37.73004793765899 39.0 38.0 39.0 35.0 39.0 10 37.35463070355394 39.0 37.0 39.0 34.0 39.0 11 37.32038819170884 39.0 37.0 39.0 34.0 39.0 12 37.29721929069912 39.0 37.0 39.0 34.0 39.0 13 37.2740956686601 39.0 37.0 39.0 34.0 39.0 14 38.41931229370495 40.0 38.0 41.0 34.0 41.0 15 38.48803648324039 40.0 38.0 41.0 34.0 41.0 16 38.49730590124308 40.0 38.0 41.0 34.0 41.0 17 38.46251307575404 40.0 38.0 41.0 34.0 41.0 18 38.38295444122848 40.0 38.0 41.0 34.0 41.0 19 38.24876150405131 40.0 37.0 41.0 34.0 41.0 20 38.1649152992998 40.0 37.0 41.0 34.0 41.0 21 38.097890812664644 40.0 36.0 41.0 34.0 41.0 22 38.14925806343003 40.0 37.0 41.0 34.0 41.0 23 38.135070652609286 40.0 37.0 41.0 34.0 41.0 24 38.095170591424626 40.0 36.0 41.0 34.0 41.0 25 37.933617545949446 40.0 36.0 41.0 34.0 41.0 26 37.94914474990335 40.0 36.0 41.0 34.0 41.0 27 37.96771144989069 40.0 36.0 41.0 34.0 41.0 28 37.833980590414555 40.0 36.0 41.0 33.0 41.0 29 37.7752723413988 40.0 36.0 41.0 33.0 41.0 30 37.62008273280647 40.0 36.0 41.0 33.0 41.0 31 37.510925583431145 40.0 36.0 41.0 33.0 41.0 32 37.33175553535417 40.0 36.0 41.0 32.0 41.0 33 37.08180284607356 40.0 35.0 41.0 32.0 41.0 34 36.9179870130624 40.0 35.0 41.0 31.0 41.0 35 36.788160594060095 40.0 35.0 41.0 31.0 41.0 36 36.71972781533611 40.0 35.0 41.0 31.0 41.0 37 36.67351656223478 40.0 35.0 41.0 31.0 41.0 38 36.56740239189065 40.0 35.0 41.0 30.0 41.0 39 36.47764089596634 40.0 35.0 41.0 30.0 41.0 40 36.365725212375786 39.0 35.0 41.0 30.0 41.0 41 36.26828370642044 39.0 35.0 41.0 29.0 41.0 42 36.285511774273886 39.0 35.0 41.0 29.0 41.0 43 36.18496227332941 39.0 35.0 41.0 29.0 41.0 44 36.07585504692179 39.0 35.0 41.0 29.0 41.0 45 36.01153104453942 39.0 35.0 41.0 29.0 41.0 46 35.87607610117876 39.0 35.0 41.0 28.0 41.0 47 35.73007464064171 39.0 35.0 41.0 28.0 41.0 48 35.6468797564688 39.0 35.0 41.0 28.0 41.0 49 35.57742181540809 38.0 35.0 40.0 28.0 41.0 50 35.43280194397714 38.0 35.0 40.0 27.0 41.0 51 34.308508847394776 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 10.0 10 15.0 11 13.0 12 12.0 13 21.0 14 26.0 15 33.0 16 56.0 17 136.0 18 262.0 19 477.0 20 926.0 21 1607.0 22 2362.0 23 3323.0 24 5081.0 25 7866.0 26 10292.0 27 11268.0 28 11167.0 29 11721.0 30 13239.0 31 15727.0 32 20507.0 33 27973.0 34 47257.0 35 60088.0 36 60731.0 37 91188.0 38 164487.0 39 293206.0 40 243.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.05528678422945 18.115883979023064 20.793844846382385 21.0349843903651 2 32.47233629039842 26.512462746436604 23.949556904636683 17.065644058528296 3 29.698244685235686 25.8828528537942 28.18383726505729 16.235065195912817 4 26.425155602924328 24.69027442539245 30.471237985109024 18.413331986574207 5 24.59356318796462 29.95099422170674 27.287313645108068 18.16812894522057 6 24.647549653035377 33.96213052650155 27.4886309148558 13.90168890560728 7 76.65880670175207 5.872682500374422 13.165499281921964 4.30301151595155 8 78.23555978159283 5.992845922628688 11.228836434942826 4.542757860835664 9 71.95583094457739 6.790220206727526 13.602731599032655 7.65121724966244 10 36.60491311662121 25.2009979949543 22.177872050916783 16.016216837507706 11 28.29564149271995 25.816791996535578 27.58719975108176 18.300366759662705 12 24.084232817501366 22.717388401849703 32.827602060541466 20.37077672010746 13 23.360117586003923 23.932606315603714 34.774481700910336 17.932794397482024 14 21.114164539135544 26.940058769781977 32.49892317319671 19.446853517885774 15 19.811291182094607 25.827124889850197 35.75842856429672 18.603155363758482 16 23.099241054791037 25.74330074408442 31.197094715479718 19.960363485644823 17 23.594291134493638 25.765127529962488 29.866241276541892 20.77434005900198 18 24.157956269802295 24.825763037731313 30.993107147459675 20.023173545006717 19 23.397269561966596 26.968503251378394 28.859887127653028 20.77434005900198 20 23.835662878326115 26.666411246831924 29.98733349819523 19.51059237664673 21 23.28767123287671 28.079695632436923 30.352351662028475 18.280281472657887 22 22.359684533284106 24.895190792811555 31.16481893636215 21.580305737542187 23 21.13390152636571 26.935995272411056 30.86876412790961 21.06133907331362 24 21.482085201090875 25.91118123546574 30.839274746989236 21.76745881645415 25 22.00848226051198 28.132056698559317 28.900638201287084 20.958822839641623 26 21.60271302304467 25.65901219861911 29.99267409473986 22.745600683596358 27 22.404266904439314 25.606070632872303 29.44027065214489 22.549391810543497 28 21.38618666313723 26.09310981775795 30.49457407001058 22.02612944909425 29 23.111663746753557 25.935562219691242 28.62803557766098 22.32473845589422 30 22.97826493306259 25.870546261756566 29.166274829420185 21.98491397576066 31 24.244102414065736 25.559746762843844 28.30759978498294 21.88855103810748 32 24.315039468169463 26.778215474494587 27.972535401769594 20.934209655566352 33 22.88991289022636 27.769708832998386 27.021560917050085 22.31881735972517 34 22.613130669304457 26.873881812598466 29.680133096953888 20.83285442114319 35 21.19032608985902 27.735575455082678 28.44657139506831 22.62752705998999 36 22.74153718622544 29.209580101401674 26.78518146998759 21.263701242385295 37 21.19961408384969 28.630241476233763 28.595527598693643 21.574616841222905 38 21.42368693887455 28.927108984160487 27.37369198922128 22.275512087743678 39 21.680267772866753 28.327104572363343 28.058101046408623 21.934526608361285 40 22.353763437115056 26.857976122889447 29.415076968445202 21.373183471550295 41 20.477356451150374 27.282205248413206 28.975870952611494 23.264567347824926 42 21.774424811947146 26.75882678703907 29.044602108142435 22.422146292871346 43 22.132941379986928 26.6114959823621 28.60527999238385 22.65028264526713 44 22.50678313811131 26.194929451880643 28.25396161968683 23.044325790321214 45 21.468617609804404 25.73772794769002 28.25326502013753 24.540389422368044 46 23.118629742246558 26.59837669085028 27.490488513653933 22.792505053249233 47 20.895083980880663 26.077436327898695 30.345966166159887 22.681513525060748 48 21.278097633070832 26.749887092823048 28.677726345511058 23.294288928595066 49 21.793000799928482 25.45630172977278 29.902348353180614 22.848349117118122 50 20.699571707377103 25.80088630682656 30.4030873292025 23.09645465659384 51 20.652667337724232 24.647665752960258 29.11646796164523 25.583198947670283 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 261.0 1 630.5 2 1000.0 3 6181.0 4 11362.0 5 7506.5 6 3651.0 7 3609.0 8 3567.0 9 3633.0 10 3699.0 11 3625.0 12 3551.0 13 3520.0 14 3489.0 15 3422.5 16 3356.0 17 3302.5 18 3249.0 19 3175.5 20 3102.0 21 3490.5 22 3879.0 23 4020.0 24 4161.0 25 4923.0 26 6543.0 27 7401.0 28 9336.5 29 11272.0 30 12734.0 31 14196.0 32 16931.5 33 19667.0 34 21328.0 35 22989.0 36 25807.5 37 28626.0 38 30840.5 39 33055.0 40 35876.5 41 38698.0 42 42523.0 43 46348.0 44 51324.0 45 56300.0 46 71780.0 47 87260.0 48 83851.5 49 80443.0 50 79821.0 51 79199.0 52 70600.0 53 62001.0 54 56561.0 55 51121.0 56 46348.0 57 41575.0 58 38234.5 59 34894.0 60 31312.0 61 27730.0 62 24654.5 63 21579.0 64 18730.0 65 15881.0 66 12895.5 67 9910.0 68 8072.0 69 6234.0 70 5244.5 71 4255.0 72 3588.5 73 2922.0 74 2307.5 75 1361.0 76 1029.0 77 786.5 78 544.0 79 389.0 80 234.0 81 187.5 82 141.0 83 116.5 84 92.0 85 50.0 86 8.0 87 7.0 88 6.0 89 5.0 90 4.0 91 4.0 92 4.0 93 3.0 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 861327.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.39699230843506 #Duplication Level Percentage of deduplicated Percentage of total 1 73.82214282827829 26.86903964713039 2 8.752737763727266 6.371466581282608 3 3.4807591178194617 3.8006748851637053 4 2.1832107237188993 3.1784921567555893 5 1.5503998957956155 2.8214946541135766 6 1.1772769175025832 2.5709603346743797 7 1.0127385410135006 2.5802445821406885 8 0.8910977106999569 2.5946621217928336 9 0.7207975014442627 2.361137500440544 >10 6.325197666469664 40.27894889354744 >50 0.05459036846936847 1.3083491811721004 >100 0.023623861698130272 1.410830686085097 >500 0.0022346896200832497 0.5561057209342456 >1k 0.002553930994380857 1.7224636872397108 >5k 6.384827485952142E-4 1.5751293675270859 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTC 6816 0.791337088004904 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6740 0.7825134937137697 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCG 3179 0.3690816612041652 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGC 3132 0.36362496473464784 No Hit GAACTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCT 2181 0.2532139361705833 No Hit GCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC 1793 0.20816716531584403 No Hit CGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTG 1248 0.14489270625441905 No Hit CCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC 1233 0.14315120738116882 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTT 1052 0.12213712097728273 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTT 1006 0.1167965244326487 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.643996995333944E-4 0.0 0.0 0.05955926146515783 0.0 2 4.643996995333944E-4 0.0 0.0 0.49237978143028144 0.0 3 4.643996995333944E-4 0.0 0.0 0.851244649244712 0.0 4 4.643996995333944E-4 0.0 0.0 1.436736570431439 0.0 5 4.643996995333944E-4 0.0 0.0 2.982839270102992 0.0 6 4.643996995333944E-4 0.0 0.0 4.236718458843157 0.0 7 5.80499624416743E-4 0.0 0.0 5.075888715900001 0.0 8 6.965995493000916E-4 0.0 0.0 6.269163743851058 0.0 9 6.965995493000916E-4 0.0 0.0 6.870329154897036 0.0 10 6.965995493000916E-4 0.0 0.0 8.10714165467935 0.0 11 6.965995493000916E-4 0.0 0.0 8.925878324956724 0.0 12 8.126994741834402E-4 0.0 0.0 10.05947799151774 0.0 13 8.126994741834402E-4 0.0 0.0 10.496245908928897 0.0 14 8.126994741834402E-4 0.0 0.0 10.731232156892794 0.0 15 8.126994741834402E-4 0.0 0.0 10.993850186978928 0.0 16 8.126994741834402E-4 0.0 0.0 11.397297425948565 0.0 17 8.126994741834402E-4 0.0 0.0 11.859142927134526 0.0 18 8.126994741834402E-4 0.0 0.0 12.411198069954848 0.0 19 8.126994741834402E-4 0.0 0.0 12.787477926501781 0.0 20 9.287993990667888E-4 0.0 0.0 13.141814897245762 0.0 21 9.287993990667888E-4 0.0 0.0 13.526337848459413 0.0 22 9.287993990667888E-4 0.0 0.0 13.944878077663883 0.0 23 9.287993990667888E-4 0.0 0.0 14.361328508220454 0.0 24 9.287993990667888E-4 0.0 0.0 14.700108089030067 0.0 25 9.287993990667888E-4 0.0 0.0 15.015203285163475 0.0 26 9.287993990667888E-4 0.0 0.0 15.31671479008553 0.0 27 9.287993990667888E-4 0.0 0.0 15.659093468566526 0.0 28 0.0010448993239501375 0.0 0.0 15.980690260493402 0.0 29 0.0010448993239501375 0.0 0.0 16.351165120796168 0.0 30 0.0010448993239501375 0.0 0.0 16.86374628915615 0.0 31 0.001160999248833486 0.0 0.0 17.253261537139785 0.0 32 0.001160999248833486 0.0 0.0 17.63058629301067 0.0 33 0.001160999248833486 0.0 0.0 18.019172741595238 0.0 34 0.001160999248833486 0.0 0.0 18.39998049521262 0.0 35 0.001160999248833486 0.0 0.0 18.807839531327822 0.0 36 0.001160999248833486 0.0 0.0 19.16554339989342 0.0 37 0.0012770991737168346 0.0 0.0 19.536830959670368 0.0 38 0.0013931990986001833 0.0 0.0 19.946895894358356 0.0 39 0.0013931990986001833 0.0 0.0 20.470042155882727 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTAAG 20 7.0323E-4 45.000004 1 TGCGACG 40 6.8121153E-9 45.000004 1 CGTTTTT 4145 0.0 42.88299 1 ATCGCGG 75 0.0 42.0 2 TACGCGG 90 0.0 40.0 2 GCCGATA 40 3.4568802E-7 39.375004 9 CTACGGC 40 3.4568802E-7 39.375004 16 CGTAAGG 145 0.0 38.793106 2 CTACGCG 35 6.246466E-6 38.571426 1 TTACGCG 35 6.246466E-6 38.571426 1 CGCATGG 165 0.0 38.181816 2 GTCGATG 30 1.1396841E-4 37.500004 1 TAGTGCG 55 2.748493E-9 36.81818 1 GCGCTAG 80 0.0 36.562504 1 ATTACGG 25 0.0021068156 36.000004 2 CTACGAA 25 0.0021068156 36.000004 11 AACTCGT 25 0.0021068156 36.000004 12 ACGTAAC 25 0.0021068156 36.000004 17 TATCGCG 25 0.0021068156 36.000004 1 AGCGACT 235 0.0 35.425533 19 >>END_MODULE