SRR2935734.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935734.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	372453
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGC	1805	0.4846249056927988	No Hit
GCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTCTGC	1626	0.436565150502211	No Hit
GAATCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTC	1549	0.41589140106268446	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCG	1534	0.41186404727576365	No Hit
CCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTCTGC	1310	0.35172223072441355	No Hit
CTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTCTGCT	800	0.21479220196910753	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	773	0.20754296515265014	No Hit
TCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTCTGC	532	0.1428368143094565	No Hit
ACTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTCTGC	395	0.10605364972224685	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAACGG	30	2.161536E-6	45.000004	2
TCCGGCT	25	3.885711E-5	45.0	27
TCGCATC	20	7.027139E-4	45.0	36
TACCCCC	20	7.027139E-4	45.0	26
ACGCCGA	20	7.027139E-4	45.0	12
TCCGCGG	20	7.027139E-4	45.0	2
CGAAATG	25	3.885711E-5	45.0	21
GGTCGAT	25	3.885711E-5	45.0	9
CGACCTA	20	7.027139E-4	45.0	30
CCGCTCG	20	7.027139E-4	45.0	19
ACGGGTA	25	3.885711E-5	45.0	5
ACGATTG	20	7.027139E-4	45.0	1
GCCGACA	20	7.027139E-4	45.0	26
AGGTTAC	25	3.885711E-5	45.0	15
AGTTGCG	20	7.027139E-4	45.0	1
AACGCGA	20	7.027139E-4	45.0	34
GACGGTC	25	3.885711E-5	45.0	29
GCGGCAT	20	7.027139E-4	45.0	18
CGTGTCA	20	7.027139E-4	45.0	22
CGCAAGT	25	3.885711E-5	45.0	33