##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935732.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 944178 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.08922787864153 33.0 31.0 34.0 30.0 34.0 2 32.09885847795649 33.0 31.0 34.0 30.0 34.0 3 32.08317499454552 33.0 31.0 34.0 30.0 34.0 4 35.7390873331088 37.0 35.0 37.0 33.0 37.0 5 34.82661849778326 37.0 35.0 37.0 33.0 37.0 6 35.32015255597991 37.0 35.0 37.0 33.0 37.0 7 35.838616235497966 37.0 35.0 37.0 35.0 37.0 8 35.87875908991737 37.0 35.0 37.0 35.0 37.0 9 37.64230473491227 39.0 38.0 39.0 35.0 39.0 10 37.30728527883514 39.0 37.0 39.0 34.0 39.0 11 37.3267921938448 39.0 37.0 39.0 34.0 39.0 12 37.28538580648988 39.0 37.0 39.0 34.0 39.0 13 37.28581051454281 39.0 37.0 39.0 34.0 39.0 14 38.48101840966428 40.0 38.0 41.0 34.0 41.0 15 38.576648682769566 40.0 38.0 41.0 34.0 41.0 16 38.546265640588956 40.0 38.0 41.0 34.0 41.0 17 38.47236326201204 40.0 38.0 41.0 34.0 41.0 18 38.377743391606245 40.0 38.0 41.0 34.0 41.0 19 38.360827089807216 40.0 37.0 41.0 34.0 41.0 20 38.325505360218095 40.0 37.0 41.0 34.0 41.0 21 38.24027672748147 40.0 37.0 41.0 34.0 41.0 22 38.234541580083416 40.0 37.0 41.0 34.0 41.0 23 38.27085888465946 40.0 37.0 41.0 34.0 41.0 24 38.2791782905342 40.0 37.0 41.0 34.0 41.0 25 38.0479930691035 40.0 37.0 41.0 34.0 41.0 26 38.13288172357331 40.0 37.0 41.0 34.0 41.0 27 38.076207028759406 40.0 37.0 41.0 34.0 41.0 28 37.68843374872111 40.0 36.0 41.0 33.0 41.0 29 37.39693256991796 40.0 36.0 41.0 32.0 41.0 30 37.31239130757124 40.0 36.0 41.0 32.0 41.0 31 37.343788988940645 40.0 36.0 41.0 32.0 41.0 32 37.36081120297232 40.0 36.0 41.0 32.0 41.0 33 37.14319969327818 40.0 35.0 41.0 31.0 41.0 34 37.054330857105334 40.0 35.0 41.0 31.0 41.0 35 36.92847005543446 40.0 35.0 41.0 31.0 41.0 36 36.822149001565386 40.0 35.0 41.0 31.0 41.0 37 36.827004018310106 40.0 35.0 41.0 31.0 41.0 38 36.655395486867945 39.0 35.0 41.0 30.0 41.0 39 36.595300886061736 39.0 35.0 41.0 30.0 41.0 40 36.51312146650314 39.0 35.0 41.0 30.0 41.0 41 36.326855741184396 39.0 35.0 41.0 29.0 41.0 42 36.3184579602575 39.0 35.0 41.0 29.0 41.0 43 36.1205726038946 39.0 35.0 41.0 28.0 41.0 44 36.072793477501065 39.0 35.0 41.0 28.0 41.0 45 36.070833042074696 39.0 35.0 41.0 28.0 41.0 46 35.8806941064079 39.0 35.0 41.0 28.0 41.0 47 35.871184247038165 39.0 35.0 41.0 28.0 41.0 48 35.772399907644534 38.0 35.0 41.0 28.0 41.0 49 35.53042646619599 38.0 35.0 41.0 26.0 41.0 50 35.340877461665066 38.0 35.0 40.0 26.0 41.0 51 34.16770460654665 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 7.0 10 26.0 11 16.0 12 13.0 13 20.0 14 21.0 15 41.0 16 50.0 17 116.0 18 221.0 19 515.0 20 926.0 21 1625.0 22 2618.0 23 3860.0 24 5494.0 25 7632.0 26 10088.0 27 11344.0 28 12398.0 29 13589.0 30 15708.0 31 18655.0 32 23066.0 33 30495.0 34 50756.0 35 66085.0 36 67438.0 37 100272.0 38 177373.0 39 323455.0 40 248.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.09487617800881 18.082819129443813 22.193908352026842 19.62839634052054 2 29.476115732414865 25.811870219386602 27.071696226770797 17.64031782142774 3 31.212652698961424 24.68411676611825 28.061234216429533 16.041996318490792 4 27.89759981698366 25.53279148635109 28.198496469945283 18.371112226719962 5 24.705299212648463 31.962405393898187 25.306033396245198 18.026261997208152 6 25.403578562516817 34.805725191648186 24.839066362486733 14.951629883348266 7 81.28626170065391 5.402900724227847 8.993643147796284 4.317194427321967 8 82.76702062534818 5.115137188114953 7.944476571155016 4.1733656153818455 9 75.25392457778088 8.676118274308447 10.424305586446623 5.645651561464046 10 33.9926369815861 37.7976398518076 15.590174734001428 12.61954843260487 11 26.489602596120648 28.489966934200968 28.587088451541977 16.43334201813641 12 25.79608929672159 22.302574302726814 33.00617044667425 18.895165953877342 13 26.396505743620374 22.859248997540718 32.05020663476591 18.694038624073002 14 19.546208447983325 29.829333028306102 30.094749083329624 20.529709440380945 15 18.73735672722728 26.1305601274336 36.126238908341435 19.005844236997685 16 21.887716087432665 28.39517548597828 29.980469784299146 19.736638642289908 17 22.556657748856676 24.7190678028931 28.269775402519443 24.454499045730785 18 26.314529675548464 24.300079010525558 28.516656816829027 20.86873449709695 19 26.127806409384668 26.499240609291892 26.344820574086665 21.02813240723677 20 25.05300907244185 25.02398912069546 27.01100851746175 22.91199328940094 21 26.35435267502526 27.09732698707235 27.8715454077515 18.676774930150884 22 22.628360330361435 27.309363276839747 27.448637862775875 22.61363853002294 23 20.81588429300407 26.582699448620918 27.647011474531286 24.954404783843724 24 20.966809224531815 24.73950886379475 28.57416715915855 25.71951475251489 25 21.23211936732269 27.906602356759002 25.951462542020675 24.909815733897634 26 21.019447604159385 26.709794127802173 26.53355617267083 25.73720209536761 27 22.252160079984918 25.958346837142997 26.71318331924701 25.076309763625076 28 22.92427910838846 26.76846950469085 28.57522628148506 21.73202510543563 29 22.8116944050804 25.722268470563815 29.4444479748522 22.02158914950359 30 25.397753389721007 26.408156089211992 27.213089057359944 20.981001463707056 31 23.47258673682293 29.286109187038882 25.128418582089395 22.112885494048793 32 24.21767929352304 29.804443653633108 25.57992242988081 20.397954622963045 33 23.416347341285224 28.08538220547397 26.936552217908066 21.561718235332744 34 25.09272615968599 27.004441959037383 26.367168055176037 21.53566382610059 35 22.953193147902194 28.76745698374671 27.018528285979976 21.26082158237112 36 23.069167042655092 28.683786319952382 28.05456174577251 20.192484891620012 37 23.01758778535403 30.29248722168913 26.215289913554436 20.4746350794024 38 22.631431785108315 27.746251236525314 26.1359616512988 23.486355327067564 39 25.880607258377132 26.284556513708218 25.750652948914293 22.084183279000356 40 25.92212485357634 25.05502140486222 27.998110525769505 21.02474321579194 41 22.237438279646423 26.2374255701785 27.68238616023673 23.84274998993834 42 24.3041036753663 26.881160120231566 27.253441617999997 21.56129458640214 43 21.837195952458117 28.174030744202895 27.413369089303075 22.575404214035913 44 21.610967423515483 27.00348874894353 26.55897510850708 24.82656871903391 45 21.45707694947351 25.812505692782505 26.87194575599093 25.85847160175306 46 22.52265992217569 27.79867779168758 25.878912662654713 23.799749623482015 47 21.513316345011216 25.56520062954231 27.92884392561572 24.99263909983075 48 21.488003321407618 25.29533626074744 27.901518569591747 25.31514184825319 49 23.72073909792433 24.86914543655963 28.42355996432876 22.986555501187276 50 21.273531050289247 24.727540781505184 30.41672227058881 23.582205897616763 51 22.763822075922125 24.18505832586652 27.78215548339402 25.268964114817333 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 346.0 1 702.5 2 1059.0 3 4233.0 4 7407.0 5 5034.0 6 2661.0 7 2562.0 8 2463.0 9 2470.5 10 2478.0 11 2456.0 12 2434.0 13 2404.0 14 2374.0 15 2321.5 16 2269.0 17 2328.5 18 2388.0 19 2578.0 20 2768.0 21 2952.5 22 3137.0 23 3295.5 24 3454.0 25 4268.0 26 6164.5 27 7247.0 28 9099.0 29 10951.0 30 13698.0 31 16445.0 32 18237.0 33 20029.0 34 23122.0 35 26215.0 36 28185.0 37 30155.0 38 32717.0 39 35279.0 40 38774.5 41 42270.0 42 46375.5 43 50481.0 44 57581.0 45 64681.0 46 75373.0 47 86065.0 48 88002.5 49 89940.0 50 87425.5 51 84911.0 52 74770.0 53 64629.0 54 58353.0 55 52077.0 56 50700.5 57 49324.0 58 47364.5 59 45405.0 60 43529.0 61 41653.0 62 36291.5 63 30930.0 64 25639.5 65 20349.0 66 16323.0 67 12297.0 68 10126.5 69 7956.0 70 6640.0 71 5324.0 72 4563.0 73 3802.0 74 3252.5 75 1974.0 76 1245.0 77 982.5 78 720.0 79 602.0 80 484.0 81 346.5 82 209.0 83 129.5 84 50.0 85 32.0 86 14.0 87 8.5 88 3.0 89 6.5 90 10.0 91 6.5 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 944178.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.24164351430783 #Duplication Level Percentage of deduplicated Percentage of total 1 75.51935050916218 27.369453795851168 2 8.577770246135481 6.217449828161573 3 3.218507706152176 3.4993202680325934 4 1.8474212670640224 2.678143319267407 5 1.289521568592412 2.3367190496468617 6 0.9743566827548299 2.1187372531310444 7 0.8077046007523536 2.0490779543733195 8 0.7206657889270335 2.089449009220077 9 0.6252790086646637 2.0395025036104077 >10 6.310585031178875 44.31564059211043 >50 0.07928774018589954 1.8975798746595482 >100 0.025453831558717197 1.5531740600555055 >500 0.0023405822122011207 0.5882720975538771 >1k 0.0017554366591508402 1.247480394326129 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4086 0.43275738261217694 No Hit GAATCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTC 2267 0.24010303141992292 No Hit CCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTGC 1715 0.18163947899654515 TruSeq Adapter, Index 15 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTGC 1445 0.15304317618076252 TruSeq Adapter, Index 15 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTG 1189 0.12592964462209455 TruSeq Adapter, Index 21 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTGCT 1063 0.11258470330806267 TruSeq Adapter, Index 21 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0591223265104673E-4 0.0 0.0 0.12232862871195897 0.0 2 1.0591223265104673E-4 0.0 0.0 0.5523322932752087 0.0 3 1.0591223265104673E-4 0.0 0.0 0.8829902836117766 0.0 4 1.0591223265104673E-4 0.0 0.0 1.2606733052454093 0.0 5 1.0591223265104673E-4 0.0 0.0 2.2199203963659393 0.0 6 1.0591223265104673E-4 0.0 0.0 3.2988483103821524 0.0 7 1.0591223265104673E-4 0.0 0.0 4.051354723367839 0.0 8 1.0591223265104673E-4 0.0 0.0 5.3687969853142095 0.0 9 1.0591223265104673E-4 0.0 0.0 6.0132729209958296 0.0 10 1.0591223265104673E-4 0.0 0.0 7.093154045105901 0.0 11 1.0591223265104673E-4 0.0 0.0 7.990336567892919 0.0 12 1.0591223265104673E-4 0.0 0.0 9.023722221869182 0.0 13 1.0591223265104673E-4 0.0 0.0 9.699865915113463 0.0 14 1.0591223265104673E-4 0.0 0.0 10.072994710743101 0.0 15 1.0591223265104673E-4 0.0 0.0 10.349637462427635 0.0 16 1.0591223265104673E-4 0.0 0.0 10.78313623066837 0.0 17 2.1182446530209346E-4 0.0 0.0 11.299352452609572 0.0 18 2.1182446530209346E-4 0.0 0.0 11.94774714089928 0.0 19 2.1182446530209346E-4 0.0 0.0 12.319816814202406 0.0 20 3.177366979531402E-4 0.0 0.0 12.738170133174041 0.0 21 3.177366979531402E-4 0.0 0.0 13.174634443929005 0.0 22 3.177366979531402E-4 0.0 0.0 13.622855012508234 0.0 23 3.177366979531402E-4 0.0 0.0 14.064297198197798 0.0 24 3.177366979531402E-4 0.0 0.0 14.409994725570813 0.0 25 4.236489306041869E-4 0.0 0.0 14.745312854144029 0.0 26 5.295611632552337E-4 0.0 0.0 15.096517817614899 0.0 27 5.295611632552337E-4 0.0 0.0 15.487969429493168 0.0 28 6.354733959062804E-4 0.0 0.0 15.835361552588601 0.0 29 6.354733959062804E-4 0.0 0.0 16.22162346506697 0.0 30 6.354733959062804E-4 0.0 0.0 16.737098301379614 0.0 31 6.354733959062804E-4 0.0 0.0 17.138823399825032 0.0 32 6.354733959062804E-4 0.0 0.0 17.57751186746567 0.0 33 6.354733959062804E-4 0.0 0.0 18.14435413661407 0.0 34 7.413856285573271E-4 0.0 0.0 18.772837325165384 0.0 35 7.413856285573271E-4 0.0 0.0 19.250607406654254 0.0 36 7.413856285573271E-4 0.0 0.0 19.691202294482608 0.0 37 7.413856285573271E-4 0.0 0.0 20.093351041858632 0.0 38 7.413856285573271E-4 0.0 0.0 20.50386685561409 0.0 39 7.413856285573271E-4 0.0 0.0 21.009597766522838 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCCGGT 20 7.032646E-4 45.0 40 CAGTACG 25 3.890275E-5 45.0 1 GCCGATT 30 2.1650885E-6 44.999996 9 CTCGACG 30 2.1650885E-6 44.999996 1 CGTTTTT 2410 0.0 40.79875 1 AGTACGG 200 0.0 39.375 2 GGCGATA 350 0.0 39.214287 8 TATGCGG 190 0.0 39.078945 2 GCGATAA 100 0.0 38.25 9 TACGCGG 65 9.094947E-12 38.076927 2 CGCGAGG 90 0.0 37.500004 2 TAGCGCG 30 1.13976756E-4 37.499996 1 GTTAACG 30 1.13976756E-4 37.499996 1 ACGTAGT 30 1.13976756E-4 37.499996 12 AGTAACG 30 1.13976756E-4 37.499996 1 ACACGAC 115 0.0 37.173912 26 CACGACC 115 0.0 37.173912 27 CGGAAGG 195 0.0 36.92308 2 TTATGCG 55 2.748493E-9 36.818184 1 CTCGATG 55 2.748493E-9 36.818184 1 >>END_MODULE