##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935731.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1033602 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.934792115340333 33.0 31.0 34.0 30.0 34.0 2 32.00234422921008 33.0 31.0 34.0 30.0 34.0 3 31.982747711401487 33.0 31.0 34.0 30.0 34.0 4 35.69730418478292 37.0 35.0 37.0 33.0 37.0 5 34.8066789731444 37.0 35.0 37.0 33.0 37.0 6 35.21367315465721 37.0 35.0 37.0 33.0 37.0 7 35.7614081629099 37.0 35.0 37.0 33.0 37.0 8 35.66972393629269 37.0 35.0 37.0 33.0 37.0 9 37.570709035005734 39.0 37.0 39.0 35.0 39.0 10 37.29542125498983 39.0 37.0 39.0 34.0 39.0 11 37.20958550776798 39.0 37.0 39.0 34.0 39.0 12 37.25034297534254 39.0 37.0 39.0 34.0 39.0 13 37.212522808585895 39.0 37.0 39.0 33.0 39.0 14 38.461882813694245 40.0 38.0 41.0 34.0 41.0 15 38.4125175841378 40.0 38.0 41.0 33.0 41.0 16 38.497523224606766 40.0 38.0 41.0 34.0 41.0 17 38.40050909344215 40.0 38.0 41.0 34.0 41.0 18 38.28796674155042 40.0 38.0 41.0 34.0 41.0 19 38.10388524790006 40.0 37.0 41.0 34.0 41.0 20 37.87935975356085 40.0 36.0 41.0 33.0 41.0 21 37.97760936995091 40.0 36.0 41.0 34.0 41.0 22 38.04825842055259 40.0 36.0 41.0 34.0 41.0 23 38.03357868889572 40.0 36.0 41.0 34.0 41.0 24 37.98947176959797 40.0 36.0 41.0 34.0 41.0 25 37.89528948279899 40.0 36.0 41.0 33.0 41.0 26 37.80691504079907 40.0 36.0 41.0 33.0 41.0 27 37.80346787254668 40.0 36.0 41.0 33.0 41.0 28 37.700518187851806 40.0 36.0 41.0 33.0 41.0 29 37.61090922811682 40.0 36.0 41.0 33.0 41.0 30 37.516340912653035 40.0 36.0 41.0 33.0 41.0 31 37.3541962960598 40.0 36.0 41.0 33.0 41.0 32 37.13612202762766 40.0 36.0 41.0 32.0 41.0 33 36.81642547131294 40.0 35.0 41.0 31.0 41.0 34 36.520695586889346 40.0 35.0 41.0 30.0 41.0 35 36.39330902997479 40.0 35.0 41.0 30.0 41.0 36 36.24447127617787 40.0 35.0 41.0 29.0 41.0 37 36.105142017914055 39.0 35.0 41.0 28.0 41.0 38 36.02402859127594 39.0 35.0 41.0 27.0 41.0 39 35.92914874390723 39.0 35.0 41.0 27.0 41.0 40 35.767134738516376 39.0 35.0 41.0 26.0 41.0 41 35.69930592239566 39.0 35.0 41.0 25.0 41.0 42 35.72608121888309 39.0 35.0 41.0 26.0 41.0 43 35.67308209542938 39.0 35.0 41.0 25.0 41.0 44 35.56359217571173 39.0 35.0 41.0 25.0 41.0 45 35.549399091720026 39.0 35.0 41.0 25.0 41.0 46 35.43534745482304 39.0 35.0 41.0 24.0 41.0 47 35.21102029601336 39.0 35.0 41.0 23.0 41.0 48 35.27811091696804 39.0 35.0 41.0 24.0 41.0 49 35.296590950868904 39.0 35.0 41.0 24.0 41.0 50 35.17690851991385 39.0 35.0 40.0 24.0 41.0 51 34.08224829286321 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 13.0 10 15.0 11 16.0 12 13.0 13 15.0 14 20.0 15 33.0 16 54.0 17 119.0 18 322.0 19 735.0 20 1523.0 21 2782.0 22 4034.0 23 5287.0 24 7476.0 25 11217.0 26 15606.0 27 17146.0 28 16641.0 29 15917.0 30 17190.0 31 20893.0 32 26775.0 33 34711.0 34 52148.0 35 68911.0 36 73400.0 37 105348.0 38 189668.0 39 345301.0 40 264.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.64881259904683 15.921312071764568 17.083364776770942 23.346510552417662 2 31.267257609795646 32.13712821763116 21.49125098442147 15.104363188151726 3 25.08218830845916 31.259807933808176 30.28631910541969 13.371684652312979 4 22.44384202042953 21.960870818748415 39.280883744419995 16.314403416402058 5 26.114307054359415 26.390041814934566 29.489494021876894 18.006157108829125 6 21.96686925915391 34.00303017989516 30.06428006137759 13.965820499573336 7 70.88318327557415 4.112221145082923 20.852707328352693 4.151888250990226 8 70.27705054750281 8.371887825294454 15.971428073862088 5.379633553340647 9 64.41879949922698 5.871602415630001 16.708172004311137 13.001426080831887 10 32.01580492297809 29.4547611169483 23.641498371713677 14.88793558835993 11 23.130663446858655 23.086449136127833 34.88489766854166 18.89798974847185 12 19.343615821176815 20.569135895634876 38.300719232354425 21.78652905083388 13 20.137731931633258 22.671589257760726 40.9592860694929 16.23139274111312 14 17.24416167925372 29.302671627957377 33.93327412292159 19.519892569867316 15 14.954885923208353 25.276557127404942 41.21034982517449 18.55820712421222 16 17.85571235349777 27.216375355310845 32.4530138293076 22.47489846188378 17 17.93117660376044 26.53197265485168 33.59755495829149 21.939295783096394 18 19.408534426210476 25.194610691542778 33.75815836269667 21.638696519550077 19 17.768734967618098 27.366723361603402 31.454757246986752 23.40978442379175 20 19.896730075986696 26.82860520780726 34.94410808028622 18.330556635919823 21 18.65379517454494 29.631424861794 33.902217681467334 17.812562282193724 22 18.025990661782775 22.60821863734784 35.503414273579196 23.862376427290194 23 17.771637438782044 27.236692653458487 35.1273507597702 19.864319147989264 24 19.676432514642965 24.901170856867537 33.311081054409726 22.11131557407977 25 17.558789553425786 32.13857945321313 30.455629923316714 19.847001070044367 26 18.57987890890304 25.491339993537167 32.54144245076925 23.387338646790546 27 21.21919268732065 26.46608655943003 29.818247255713516 22.496473497535803 28 16.133676211926833 27.821637342033007 33.81030609460895 22.234380351431206 29 18.341876273459224 28.70263408933032 31.77557705964191 21.17991257756854 30 17.65428085471971 31.895932863906996 32.27141588348319 18.1783703978901 31 19.28034194980273 29.710081830337014 29.552574395173387 21.457001824686873 32 21.423720155340256 28.656678295901127 32.34920211067703 17.570399438081584 33 22.4796391647849 26.07589768595649 28.805188070456524 22.639275078802093 34 20.90224283621742 26.91093863982461 29.36700973875824 22.81980878519972 35 23.225671002958588 26.544163033740258 28.88684425920228 21.34332170409887 36 24.019013121104642 29.83150187402888 27.30180475656974 18.847680248296733 37 19.828522003633893 27.297934795017813 32.762997749617355 20.11054545173094 38 22.34747997778642 27.672160077089636 28.33701947171155 21.643340473412398 39 23.020466291667393 24.49695337276824 30.48949208689612 21.99308824866825 40 24.721314393741498 24.41790940807003 31.69730708725409 19.163469110934383 41 21.071747152192046 27.363337145245463 28.427479822987962 23.137435879574536 42 22.691519559753175 25.630174864212723 31.956401013155933 19.721904562878166 43 24.57725507497083 24.8976878914708 28.87213840530494 21.652918628253428 44 21.534110808609118 24.468799402477938 29.8930342627046 24.10405552620835 45 20.131830240266563 23.611989914880198 29.489300523799294 26.766879321053942 46 24.653783564660284 25.321158434290957 28.53380701662729 21.49125098442147 47 19.211069638023144 24.607731022192294 34.78660064512259 21.39459869466197 48 20.084519960294195 25.31167702848872 30.36342808934193 24.24037492187515 49 20.08935741223411 22.446841240632274 35.3490028076571 22.11479853947651 50 20.097677829570763 22.786333617775504 34.01376932320178 23.102219229451958 51 19.4412356013243 22.26263107076031 30.580629681444115 27.715503646471273 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 318.0 1 701.5 2 1085.0 3 11865.5 4 22646.0 5 15024.5 6 7403.0 7 7113.5 8 6824.0 9 6780.5 10 6737.0 11 6633.0 12 6529.0 13 6461.5 14 6394.0 15 6121.0 16 5848.0 17 5717.5 18 5587.0 19 5308.0 20 5029.0 21 5122.0 22 5215.0 23 5762.0 24 6309.0 25 7098.0 26 9028.0 27 10169.0 28 12387.5 29 14606.0 30 16893.0 31 19180.0 32 21662.0 33 24144.0 34 27854.0 35 31564.0 36 33928.5 37 36293.0 38 39010.0 39 41727.0 40 44541.0 41 47355.0 42 51594.5 43 55834.0 44 62253.5 45 68673.0 46 120233.5 47 171794.0 48 134940.0 49 98086.0 50 94811.5 51 91537.0 52 77408.5 53 63280.0 54 54908.0 55 46536.0 56 40442.5 57 34349.0 58 29944.0 59 25539.0 60 22420.0 61 19301.0 62 16480.0 63 13659.0 64 11647.0 65 9635.0 66 7735.5 67 5836.0 68 4938.0 69 4040.0 70 3208.5 71 2377.0 72 2022.5 73 1668.0 74 1424.0 75 970.5 76 761.0 77 534.0 78 307.0 79 261.0 80 215.0 81 157.5 82 100.0 83 60.5 84 21.0 85 14.5 86 8.0 87 7.0 88 6.0 89 6.0 90 6.0 91 3.5 92 1.0 93 2.5 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1033602.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.10124003088258 #Duplication Level Percentage of deduplicated Percentage of total 1 76.16749430083695 27.497409943053952 2 8.712980750191951 6.290988188942779 3 3.2568075635252223 3.5272437475565375 4 1.87636263968407 2.709560721608602 5 1.3640063028194989 2.4621159470861715 6 1.070408994233809 2.318585521923021 7 0.8593555605778428 2.1716660955006053 8 0.7352022527051163 2.123337039692239 9 0.659756000868771 2.14362087742608 >10 5.200771074977005 32.99747457026579 >50 0.06234042418002679 1.4906824729225263 >100 0.027290246596825583 1.8031306680440693 >500 0.002140411497162337 0.5302757320491391 >1k 0.003478168682888798 3.102064737794199 >5k 2.675514371452921E-4 0.5642751961076632 >10k+ 0.0013377571857264609 8.267568540026605 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTC 32161 3.1115458367921116 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCG 14490 1.4018935721873604 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGC 14276 1.3811892778845243 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14082 1.362419964357654 No Hit GAACTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCT 10586 1.0241853247187989 No Hit GCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC 5842 0.5652078846596659 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTT 4243 0.41050617162118497 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTT 3844 0.37190330514066344 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCT 3388 0.3277857434486388 No Hit CGTTCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTC 2945 0.28492591926099214 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTC 2928 0.28328118560142107 No Hit CGCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTG 2647 0.25609470569909887 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCT 2258 0.21845932960656037 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAATGCGGT 2132 0.2062689507179746 No Hit CCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC 1995 0.19301433240260757 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAATGCGGTCGTA 1987 0.19224034009222118 No Hit CGTCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCT 1507 0.1458008014690374 No Hit CTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGCT 1216 0.11764683117873224 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.902471163948986E-4 0.0 0.0 0.1283859744853435 0.0 2 2.902471163948986E-4 0.0 0.0 0.9996110688640308 0.0 3 2.902471163948986E-4 0.0 0.0 1.5210883879868653 0.0 4 2.902471163948986E-4 0.0 0.0 3.0094756008599055 0.0 5 2.902471163948986E-4 0.0 0.0 7.215446564538381 0.0 6 2.902471163948986E-4 0.0 0.0 9.122466868291664 0.0 7 2.902471163948986E-4 0.0 0.0 10.437383054599353 0.0 8 2.902471163948986E-4 0.0 0.0 12.031903963034127 0.0 9 3.8699615519319816E-4 0.0 0.0 12.766809661746011 0.0 10 3.8699615519319816E-4 0.0 0.0 15.2936043080412 0.0 11 3.8699615519319816E-4 0.0 0.0 16.293699122099223 0.0 12 3.8699615519319816E-4 0.0 0.0 18.727517942109245 0.0 13 3.8699615519319816E-4 0.0 0.0 19.366351845294417 0.0 14 4.8374519399149767E-4 0.0 0.0 19.722291559033362 0.0 15 4.8374519399149767E-4 0.0 0.0 20.2207426069222 0.0 16 4.8374519399149767E-4 0.0 0.0 20.73622148563954 0.0 17 4.8374519399149767E-4 0.0 0.0 21.31526448284736 0.0 18 4.8374519399149767E-4 0.0 0.0 22.013308797777093 0.0 19 4.8374519399149767E-4 0.0 0.0 22.658624886561753 0.0 20 4.8374519399149767E-4 0.0 0.0 23.120021052590843 0.0 21 4.8374519399149767E-4 0.0 0.0 23.553843742562417 0.0 22 4.8374519399149767E-4 0.0 0.0 24.073386080909287 0.0 23 5.804942327897972E-4 0.0 0.0 24.533234262317603 0.0 24 5.804942327897972E-4 0.0 0.0 24.936581005067715 0.0 25 5.804942327897972E-4 0.0 0.0 25.28797351398314 0.0 26 5.804942327897972E-4 0.0 0.0 25.63888227770457 0.0 27 5.804942327897972E-4 0.0 0.0 26.04909820220936 0.0 28 6.772432715880967E-4 0.0 0.0 26.433482133355007 0.0 29 6.772432715880967E-4 0.0 0.0 26.8376996174543 0.0 30 6.772432715880967E-4 0.0 0.0 27.409292938674653 0.0 31 6.772432715880967E-4 0.0 0.0 27.82879677090408 0.0 32 6.772432715880967E-4 0.0 0.0 28.26513493588441 0.0 33 6.772432715880967E-4 0.0 0.0 28.649712365107654 0.0 34 6.772432715880967E-4 0.0 0.0 29.02713036545982 0.0 35 6.772432715880967E-4 0.0 0.0 29.42554290723122 0.0 36 6.772432715880967E-4 0.0 0.0 29.794350243130335 0.0 37 6.772432715880967E-4 0.0 0.0 30.160351856904303 0.0 38 6.772432715880967E-4 0.0 0.0 30.54560652939913 0.0 39 6.772432715880967E-4 0.0 0.0 30.973721026081606 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAACG 40 6.8139343E-9 45.000004 1 TAGCACG 20 7.032955E-4 45.000004 1 CCACGCA 40 6.8139343E-9 45.000004 40 CGTTTTT 8075 0.0 43.88545 1 CCGATGA 1000 0.0 40.500004 18 CGATGAA 1005 0.0 40.298508 19 GTAAGCG 45 1.9279469E-8 40.0 1 CGGCGAA 250 0.0 39.600002 31 TACGGCT 1720 0.0 39.375 7 CGTTATT 220 0.0 38.863636 1 ACGATAG 35 6.2476793E-6 38.571426 1 CTACGCG 35 6.2476793E-6 38.571426 1 TTGAACG 35 6.2476793E-6 38.571426 1 ACGGCTG 1770 0.0 38.26271 8 TACGCGG 65 9.094947E-12 38.07692 2 CGTTTCT 485 0.0 38.041237 1 ACGGGCG 155 0.0 37.741936 5 CGTTTTC 310 0.0 37.741936 1 GAATCTG 3810 0.0 37.677166 1 CGCATCG 30 1.1398426E-4 37.499996 21 >>END_MODULE