##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935730.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1131359 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07048249052688 33.0 31.0 34.0 30.0 34.0 2 32.11401332379908 33.0 31.0 34.0 30.0 34.0 3 32.1302963957506 33.0 31.0 34.0 30.0 34.0 4 35.80298738066343 37.0 35.0 37.0 35.0 37.0 5 34.870487617104736 37.0 35.0 37.0 33.0 37.0 6 35.32403772807747 37.0 35.0 37.0 33.0 37.0 7 35.86524790097573 37.0 35.0 37.0 35.0 37.0 8 35.81635802605539 37.0 35.0 37.0 35.0 37.0 9 37.63974388324131 39.0 37.0 39.0 35.0 39.0 10 37.36910653470738 39.0 37.0 39.0 34.0 39.0 11 37.337828222518226 39.0 37.0 39.0 34.0 39.0 12 37.306929984204835 39.0 37.0 39.0 34.0 39.0 13 37.26338500864889 39.0 37.0 39.0 34.0 39.0 14 38.44888138955009 40.0 38.0 41.0 34.0 41.0 15 38.49027497019072 40.0 38.0 41.0 34.0 41.0 16 38.495559764849176 40.0 38.0 41.0 34.0 41.0 17 38.43714329403841 40.0 38.0 41.0 34.0 41.0 18 38.38793433384098 40.0 38.0 41.0 34.0 41.0 19 38.28270336825004 40.0 37.0 41.0 34.0 41.0 20 38.22604672787329 40.0 37.0 41.0 34.0 41.0 21 38.17017144867368 40.0 37.0 41.0 34.0 41.0 22 38.213465398693074 40.0 37.0 41.0 34.0 41.0 23 38.19787795032346 40.0 37.0 41.0 34.0 41.0 24 38.15829369810997 40.0 37.0 41.0 34.0 41.0 25 38.01219064859165 40.0 36.0 41.0 34.0 41.0 26 37.998935793147886 40.0 37.0 41.0 34.0 41.0 27 38.00876909981712 40.0 37.0 41.0 34.0 41.0 28 37.84750198654892 40.0 36.0 41.0 33.0 41.0 29 37.80707626845236 40.0 36.0 41.0 33.0 41.0 30 37.67160379684963 40.0 36.0 41.0 33.0 41.0 31 37.600442476702796 40.0 36.0 41.0 33.0 41.0 32 37.473734685453515 40.0 36.0 41.0 33.0 41.0 33 37.333680113916095 40.0 36.0 41.0 33.0 41.0 34 37.222974316728816 40.0 36.0 41.0 32.0 41.0 35 37.13613539115347 40.0 35.0 41.0 32.0 41.0 36 37.05831217146812 40.0 35.0 41.0 32.0 41.0 37 37.0310246349744 40.0 35.0 41.0 32.0 41.0 38 36.94913374092574 40.0 35.0 41.0 31.0 41.0 39 36.864611498207026 39.0 35.0 41.0 31.0 41.0 40 36.74720225852271 39.0 35.0 41.0 31.0 41.0 41 36.624286367103636 39.0 35.0 41.0 31.0 41.0 42 36.64686982646534 39.0 35.0 41.0 31.0 41.0 43 36.56251463947341 39.0 35.0 41.0 31.0 41.0 44 36.4376762813572 39.0 35.0 41.0 30.0 41.0 45 36.402193291430926 39.0 35.0 41.0 30.0 41.0 46 36.256804427241924 39.0 35.0 41.0 30.0 41.0 47 36.13391947206855 39.0 35.0 41.0 30.0 41.0 48 36.09263195855604 38.0 35.0 40.0 30.0 41.0 49 36.06103544498254 38.0 35.0 40.0 30.0 41.0 50 35.96247698564293 38.0 35.0 40.0 30.0 41.0 51 34.77391084527546 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 14.0 9 22.0 10 24.0 11 16.0 12 18.0 13 18.0 14 37.0 15 40.0 16 104.0 17 139.0 18 299.0 19 528.0 20 1012.0 21 1703.0 22 2649.0 23 3736.0 24 5321.0 25 7247.0 26 9575.0 27 11096.0 28 12351.0 29 13711.0 30 16072.0 31 20476.0 32 27026.0 33 37393.0 34 64437.0 35 83832.0 36 86054.0 37 127012.0 38 218821.0 39 380297.0 40 279.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.17227422948861 16.617360183637555 19.755179390449893 19.455186196423945 2 30.47591436493633 27.21267077912493 24.442639339060367 17.868775516878372 3 30.544062494751888 26.794059180154132 26.82552576149569 15.836352563598291 4 27.42515859245385 24.04029136640094 29.482507320841574 19.052042720303636 5 25.600362042463974 29.602893511255047 25.1087409036389 19.68800354264208 6 24.963340548844354 34.32031742355875 25.581181570129374 15.135160457467522 7 75.88068862315144 5.915452124391992 12.995167758421507 5.208691494035049 8 75.67739329425937 6.967284478224861 11.280592632400502 6.074729595115255 9 68.4900195251905 7.603245300563305 14.079792532697402 9.826942641548793 10 37.11315329616859 25.713677091002946 20.42914760036381 16.744022012464654 11 29.275853199559116 24.62030177865735 26.50564498094769 19.598200040835845 12 25.86261301673474 20.862431818724207 31.46260382425031 21.812351340290746 13 23.969138001288716 22.060725198632795 33.874481928371104 20.09565487170739 14 20.38601363492932 26.52279249999337 30.70316318692829 22.388030678149022 15 19.001660834447776 24.268070524033487 35.58525631563456 21.14501232588418 16 22.01529311208909 24.833319927626864 31.08765652635459 22.06373043392946 17 21.82057154271986 25.429593966194634 28.9892067858213 23.760627705264202 18 23.724564881704215 24.448473031106836 28.77459762993002 23.052364457258925 19 23.314350263709397 27.209488765281403 26.20370722290626 23.272453748102944 20 24.93593987408064 25.472197595988543 28.00790907218664 21.583953457744183 21 24.449268534567718 27.840146231213964 27.493483500816275 20.21710173340204 22 23.100183054185276 24.290521399485044 27.811684885169075 24.797610661160604 23 22.21823488388743 26.828972943159513 28.2261421882886 22.72664998466446 24 23.31709033118577 23.232766964332278 29.343470993734083 24.10667171074787 25 22.935955784149858 27.2035666839615 26.301023812954156 23.559453718934485 26 22.151589371720206 24.893071076466445 28.491928733496618 24.46341081831673 27 25.074092308453817 24.243498306019575 26.266286828495637 24.41612255703097 28 21.71627220007089 25.67284124667767 29.519719204956164 23.09116734829528 29 23.59675399232251 24.46579732869938 28.63724069901773 23.300207979960383 30 24.696758500175452 24.040468144947802 28.775304744117474 22.487468610759272 31 24.42080718852283 24.334450868380415 27.867988852344833 23.37675309075192 32 24.05646660343887 26.053091900979265 27.82458971909005 22.06585177649181 33 23.13836722030761 24.883348256389 26.15138077303491 25.82690375026848 34 21.736424954413234 24.075028350859455 30.924755095420643 23.263791599306675 35 22.129845610456098 24.359376643488055 28.101071366383263 25.409706379672585 36 21.01119096590914 25.53901988670263 27.643568487102677 25.80622066028555 37 22.151500982446773 25.53990377943694 28.770885280445906 23.537709957670376 38 21.42140558390396 24.84516409026666 27.21205205421091 26.521378271618467 39 22.930122092103392 24.165892523946862 27.255627966012558 25.64835741793719 40 23.318681338107535 22.768723278817777 29.236078026515017 24.67651735655968 41 20.000901570589 24.89148006954468 28.6695911730936 26.43802718677272 42 22.33482033554336 23.97072900821048 28.89940328401506 24.795047372231096 43 23.361196578628004 23.062264055883233 28.2924341433621 25.284105222126662 44 23.345905234324384 23.44967424133277 28.126439087858053 25.07798143648479 45 22.392096584726865 22.33084281823895 28.187516075799106 27.08954452123508 46 23.668702860895614 23.87208657906111 27.48844531223069 24.970765247812587 47 21.763030125716064 23.264233545673832 30.777233398063746 24.19550293054636 48 21.583511511377026 22.916952090362123 29.280007495410388 26.219528902850463 49 21.67914870522973 22.295133551772693 30.50039819367681 25.525319549320773 50 20.43029666091842 22.268174823376135 31.711331239686075 25.59019727601937 51 20.516741370334262 21.53268767915401 29.32331823939174 28.627252711119986 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 340.0 1 860.0 2 1380.0 3 6146.0 4 10912.0 5 7145.5 6 3379.0 7 3267.5 8 3156.0 9 3036.0 10 2916.0 11 2948.5 12 2981.0 13 2956.0 14 2931.0 15 2893.0 16 2855.0 17 2874.0 18 2893.0 19 2843.5 20 2794.0 21 3045.0 22 3296.0 23 3789.0 24 4282.0 25 5158.0 26 6584.0 27 7134.0 28 9409.5 29 11685.0 30 13141.0 31 14597.0 32 16271.0 33 17945.0 34 21657.0 35 25369.0 36 27243.5 37 29118.0 38 31171.0 39 33224.0 40 36799.0 41 40374.0 42 45311.0 43 50248.0 44 57489.0 45 64730.0 46 95095.0 47 125460.0 48 116750.0 49 108040.0 50 107495.0 51 106950.0 52 94256.0 53 81562.0 54 73954.5 55 66347.0 56 62502.5 57 58658.0 58 56364.0 59 54070.0 60 52153.0 61 50236.0 62 45777.0 63 41318.0 64 35803.0 65 30288.0 66 25617.0 67 20946.0 68 17781.5 69 14617.0 70 12618.5 71 10620.0 72 9115.0 73 7610.0 74 6076.0 75 3749.0 76 2956.0 77 2128.0 78 1300.0 79 979.0 80 658.0 81 508.5 82 359.0 83 253.0 84 147.0 85 94.0 86 41.0 87 33.0 88 25.0 89 24.5 90 24.0 91 16.0 92 8.0 93 4.5 94 1.0 95 1.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1131359.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.18261230408172 #Duplication Level Percentage of deduplicated Percentage of total 1 73.67526563718485 23.710625104017545 2 8.973303767100022 5.775687124466721 3 3.3282757260259666 3.213378219953394 4 1.9114855763073395 2.4606639690857333 5 1.343247353635321 2.1614604405264646 6 1.081131025991622 2.087617239564148 7 0.8736542492587698 1.9681533194195993 8 0.7372897974110229 1.8982329364667125 9 0.681047096485921 1.9726087200324236 >10 7.250892547952474 44.93028142531353 >50 0.09599727640564741 2.0554878690972456 >100 0.04208364645357753 2.229208505200035 >500 0.0019253955875352066 0.4144523771934629 >1k 0.0033006781500603544 2.252312320655803 >5k 8.251695375150886E-4 1.5661024043799112 >10k+ 2.7505651250502955E-4 1.3037280246273646 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTC 14728 1.3017972190966793 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6451 0.5701992029055322 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCG 5782 0.5110667789799701 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGC 5459 0.4825170436616494 No Hit GAACTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCT 4752 0.42002582734569666 No Hit GCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCTGC 4064 0.3592140072249392 TruSeq Adapter, Index 23 (95% over 22bp) GAATGCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTT 2422 0.21407882025068964 No Hit CCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCTGC 2396 0.21178069914147502 TruSeq Adapter, Index 23 (95% over 22bp) CGTTTCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTT 1717 0.15176438248159957 No Hit CGCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCTG 1717 0.15176438248159957 TruSeq Adapter, Index 20 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTCTGCT 1609 0.14221834095101554 TruSeq Adapter, Index 20 (95% over 23bp) GAATGACTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCT 1582 0.13983183056836956 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTC 1491 0.13178840668611821 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTC 1475 0.13037417831121687 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCT 1211 0.10703941012534482 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.838927343133347E-5 0.0 0.0 0.14849397936464023 0.0 2 8.838927343133347E-5 0.0 0.0 0.8267048744032619 0.0 3 8.838927343133347E-5 0.0 0.0 1.2946376879487413 0.0 4 8.838927343133347E-5 0.0 0.0 2.1601454533883584 0.0 5 8.838927343133347E-5 0.0 0.0 4.507145830810556 0.0 6 8.838927343133347E-5 0.0 0.0 6.301271302919763 0.0 7 8.838927343133347E-5 0.0 0.0 7.455016489018958 0.0 8 8.838927343133347E-5 0.0 0.0 9.19973235728005 0.0 9 8.838927343133347E-5 0.0 0.0 10.102982342474847 0.0 10 8.838927343133347E-5 0.0 0.0 11.870502643281222 0.0 11 8.838927343133347E-5 0.0 0.0 12.894757543803514 0.0 12 8.838927343133347E-5 0.0 0.0 14.365820221521197 0.0 13 8.838927343133347E-5 0.0 0.0 14.940085331004571 0.0 14 8.838927343133347E-5 0.0 0.0 15.228145973117286 0.0 15 8.838927343133347E-5 0.0 0.0 15.581791456116052 0.0 16 8.838927343133347E-5 0.0 0.0 16.078627562073578 0.0 17 8.838927343133347E-5 0.0 0.0 16.60639991373207 0.0 18 8.838927343133347E-5 0.0 0.0 17.26790523609217 0.0 19 8.838927343133347E-5 0.0 0.0 17.71612724166246 0.0 20 1.7677854686266693E-4 0.0 0.0 18.124750852735517 0.0 21 1.7677854686266693E-4 0.0 0.0 18.548754197385623 0.0 22 1.7677854686266693E-4 0.0 0.0 19.032243523055016 0.0 23 1.7677854686266693E-4 0.0 0.0 19.461638613384434 0.0 24 1.7677854686266693E-4 0.0 0.0 19.82916121231192 0.0 25 1.7677854686266693E-4 0.0 0.0 20.164244947890104 0.0 26 1.7677854686266693E-4 0.0 0.0 20.509758617733187 0.0 27 1.7677854686266693E-4 0.0 0.0 20.881523901785375 0.0 28 1.7677854686266693E-4 0.0 0.0 21.222087772316304 0.0 29 1.7677854686266693E-4 0.0 0.0 21.58253922936928 0.0 30 1.7677854686266693E-4 0.0 0.0 22.0988209754817 0.0 31 1.7677854686266693E-4 0.0 0.0 22.482518811447118 0.0 32 1.7677854686266693E-4 0.0 0.0 22.93074081701741 0.0 33 1.7677854686266693E-4 0.0 0.0 23.31585288135773 0.0 34 2.651678202940004E-4 0.0 0.0 23.667465411067575 0.0 35 2.651678202940004E-4 0.0 0.0 24.034104117260746 0.0 36 2.651678202940004E-4 0.0 0.0 24.39694208469637 0.0 37 2.651678202940004E-4 0.0 0.0 24.749173339320233 0.0 38 2.651678202940004E-4 0.0 0.0 25.12809815452036 0.0 39 3.5355709372533387E-4 0.0 0.0 25.51789485035254 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATCG 20 7.033238E-4 45.000004 39 CGTTTTT 3200 0.0 41.34375 1 GCTACGA 140 0.0 38.57143 10 AGTAACG 30 1.1399108E-4 37.499996 1 CGAATAT 145 0.0 37.241383 14 CTCGTAA 165 0.0 36.81818 33 GCGATAT 110 0.0 36.81818 9 GCGTAAG 135 0.0 36.666664 1 CGTAAGG 215 0.0 36.627907 2 GACACGA 295 0.0 36.61017 25 TTACGGG 210 0.0 36.42857 3 ATCTCGT 25 0.0021070947 36.0 14 ACACGAC 300 0.0 36.0 26 TACGAAT 150 0.0 36.0 12 CATCGAA 25 0.0021070947 36.0 12 TCGCGAT 25 0.0021070947 36.0 43 ACGACCA 300 0.0 36.0 28 TGCACGG 270 0.0 35.833332 2 AGTACGG 145 0.0 35.68966 2 TACGGCT 800 0.0 35.4375 7 >>END_MODULE