##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935729.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1038902 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.002984882115925 33.0 31.0 34.0 30.0 34.0 2 32.05951668203546 33.0 31.0 34.0 30.0 34.0 3 32.04808923267065 33.0 31.0 34.0 30.0 34.0 4 35.74542930902049 37.0 35.0 37.0 35.0 37.0 5 34.81272535811848 37.0 35.0 37.0 33.0 37.0 6 35.26060975914957 37.0 35.0 37.0 33.0 37.0 7 35.825748723171195 37.0 35.0 37.0 35.0 37.0 8 35.77688848418811 37.0 35.0 37.0 35.0 37.0 9 37.65614466042033 39.0 38.0 39.0 35.0 39.0 10 37.33915518499339 39.0 37.0 39.0 34.0 39.0 11 37.26228171665855 39.0 37.0 39.0 34.0 39.0 12 37.27825049908461 39.0 37.0 39.0 34.0 39.0 13 37.24101888339805 39.0 37.0 39.0 34.0 39.0 14 38.39721359666263 40.0 38.0 41.0 34.0 41.0 15 38.438602486086275 40.0 38.0 41.0 34.0 41.0 16 38.47551357105868 40.0 38.0 41.0 34.0 41.0 17 38.41173180916005 40.0 38.0 41.0 34.0 41.0 18 38.30616843552135 40.0 38.0 41.0 34.0 41.0 19 38.15883211313483 40.0 37.0 41.0 34.0 41.0 20 38.01606888811457 40.0 36.0 41.0 34.0 41.0 21 38.00818364003535 40.0 36.0 41.0 34.0 41.0 22 38.05952149480894 40.0 36.0 41.0 34.0 41.0 23 38.04503600917122 40.0 36.0 41.0 34.0 41.0 24 37.99233421439173 40.0 36.0 41.0 34.0 41.0 25 37.86035160197978 40.0 36.0 41.0 33.0 41.0 26 37.84481981938624 40.0 36.0 41.0 33.0 41.0 27 37.85350398786411 40.0 36.0 41.0 34.0 41.0 28 37.705886599506016 40.0 36.0 41.0 33.0 41.0 29 37.65823340411319 40.0 36.0 41.0 33.0 41.0 30 37.5022437149991 40.0 36.0 41.0 33.0 41.0 31 37.38342692573506 40.0 35.0 41.0 33.0 41.0 32 37.170225873085236 40.0 35.0 41.0 32.0 41.0 33 36.83563127224704 40.0 35.0 41.0 31.0 41.0 34 36.647796423531766 40.0 35.0 41.0 30.0 41.0 35 36.50169217115763 40.0 35.0 41.0 30.0 41.0 36 36.41056326775769 40.0 35.0 41.0 30.0 41.0 37 36.397368567968876 40.0 35.0 41.0 30.0 41.0 38 36.25001106937902 39.0 35.0 41.0 29.0 41.0 39 36.16519267457373 39.0 35.0 41.0 29.0 41.0 40 35.994507662897945 39.0 35.0 41.0 28.0 41.0 41 35.917373342240175 39.0 35.0 41.0 27.0 41.0 42 35.96130626372844 39.0 35.0 41.0 28.0 41.0 43 35.91352986133437 39.0 35.0 41.0 28.0 41.0 44 35.83578720610799 39.0 35.0 41.0 27.0 41.0 45 35.78808877064439 39.0 35.0 41.0 27.0 41.0 46 35.653464908143405 39.0 35.0 41.0 26.0 41.0 47 35.48188472059925 39.0 35.0 41.0 26.0 41.0 48 35.45460880814552 39.0 35.0 41.0 26.0 41.0 49 35.45652525454759 39.0 35.0 40.0 26.0 41.0 50 35.360905070930656 38.0 35.0 40.0 26.0 41.0 51 34.25163104893436 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 19.0 10 18.0 11 16.0 12 20.0 13 14.0 14 15.0 15 26.0 16 54.0 17 126.0 18 337.0 19 665.0 20 1178.0 21 2143.0 22 3220.0 23 4692.0 24 6634.0 25 10311.0 26 14288.0 27 15559.0 28 15561.0 29 15616.0 30 17230.0 31 20638.0 32 26169.0 33 35278.0 34 55743.0 35 69708.0 36 74739.0 37 109109.0 38 194188.0 39 345318.0 40 266.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.38137957189417 16.373151654342756 19.587410554604766 21.658058219158306 2 31.905993058055525 27.800504763683197 23.991002038690848 16.30250013957043 3 28.58902957160541 27.202469530331065 29.517798598905383 14.69070229915815 4 24.798970451495904 23.922949421600883 34.00137837832634 17.276701748576865 5 25.417989377246364 28.6081844100791 28.165120482971446 17.80870572970309 6 23.66671736121405 34.012447757343814 28.45619702339586 13.864637858046283 7 73.8655811616495 5.184512109900645 16.502904027521364 4.44700270092848 8 74.45119943940814 6.847806626611558 13.730072711381824 4.9709212225984745 9 68.27698858987662 6.705541042369732 15.213176988782386 9.80429337897126 10 34.53059095083078 29.27898877853734 21.91842926474297 14.271991005888909 11 24.967513778970492 23.45543660518509 32.76747951202327 18.809570103821148 12 22.303451143611237 20.74160989198211 35.87797501593028 21.076963948476372 13 22.140683144319677 22.309130216324544 38.078663820071576 17.471522819284203 14 18.993899328329334 27.128160307709486 34.383897614981976 19.494042748979208 15 17.578173879730716 25.0138126599044 38.4189269055214 18.989086554843478 16 20.70753545570227 26.215947221200846 32.35656491180111 20.719952411295772 17 20.97926464671355 25.76720422137988 31.855555191923777 21.39797593998279 18 22.11623425501154 24.404323025655934 32.210834130649474 21.26860858868305 19 20.682701544515268 26.642936484865753 30.329328464089972 22.345033506529006 20 21.89022641211587 26.67518206722097 32.30939973163975 19.12519178902341 21 21.837574670180633 27.564005074588366 32.5448406105677 18.05357964466331 22 20.931233167324734 22.79088884225846 33.27310949444702 23.00476849596978 23 19.77337612209814 26.199102514000362 33.24663924027483 20.780882123626675 24 21.128075602896136 24.515498093179144 32.76507312528034 21.591353178644376 25 20.19035481691247 28.894063155138788 30.086090892114942 20.829491135833795 26 19.981769214035587 25.139618558824605 31.081949981807718 23.79666224533209 27 21.783767862608794 24.510107786874986 30.233361760782056 23.47276258973416 28 19.670864046849463 25.261092961607545 31.73523585477745 23.332807136765545 29 21.319335221223945 23.172349268747197 29.76113242635013 25.74718308367873 30 21.044910877060587 24.63081214590019 30.391798263936348 23.932478713102874 31 24.431852089995015 23.455244094245657 28.587874505968802 23.52502930979053 32 25.289969602522667 25.494223709262283 28.03998837233926 21.175818315875798 33 22.541009642872957 26.66757788511332 27.85999064396834 22.93142182804538 34 21.512038671597512 26.055104331303625 30.874615700037154 21.558241297061706 35 20.562767229247804 28.285343564648063 28.885207651924823 22.266681554179314 36 21.384596429692117 30.22585383414412 27.512989675638316 20.87656006052544 37 21.289784792020807 27.408841257404454 30.078582965477015 21.222790985097728 38 21.659405795734344 28.6955843765822 28.028245205033777 21.616764622649683 39 23.006404838954975 26.265518788105137 29.36070967232713 21.36736670061276 40 21.55843380800114 27.466402028295256 30.589121976856337 20.386042186847266 41 19.324633122277174 28.05962448816154 29.86335573518965 22.752386654371634 42 20.85365125873278 26.910719201618633 30.872786846112533 21.36284269353606 43 22.34897998078741 25.87058259585601 29.02246795174136 22.757969471615226 44 22.112191525283425 24.8299647127448 29.194476476125757 23.863367285846017 45 20.839212938275217 24.114112784458978 29.129407778597017 25.917266498668788 46 23.284486890967578 25.297477529160595 28.45735208903246 22.96068349083937 47 19.98764079768833 24.751420249455673 32.58632671801575 22.674612234840243 48 20.568927579309694 25.589227857873027 30.006295107719495 23.835549455097784 49 20.776069350140823 23.833528090233727 32.493440189738784 22.89696236988667 50 20.399902974486526 24.310858964560662 31.939586216986783 23.349651843966033 51 19.719569314526296 23.801089996939076 29.990509210685897 26.488831477848727 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 316.0 1 650.5 2 985.0 3 9782.5 4 18580.0 5 12282.5 6 5985.0 7 5794.0 8 5603.0 9 5532.5 10 5462.0 11 5509.0 12 5556.0 13 5424.5 14 5293.0 15 5130.5 16 4968.0 17 4747.0 18 4526.0 19 4510.5 20 4495.0 21 4579.5 22 4664.0 23 5275.0 24 5886.0 25 6838.0 26 9029.5 27 10269.0 28 11494.0 29 12719.0 30 15482.5 31 18246.0 32 21018.5 33 23791.0 34 26256.5 35 28722.0 36 31980.5 37 35239.0 38 37603.0 39 39967.0 40 42996.0 41 46025.0 42 50382.0 43 54739.0 44 60296.5 45 65854.0 46 97653.5 47 129453.0 48 112271.0 49 95089.0 50 93661.0 51 92233.0 52 79965.0 53 67697.0 54 60763.0 55 53829.0 56 49018.0 57 44207.0 58 39862.0 59 35517.0 60 32225.5 61 28934.0 62 25086.0 63 21238.0 64 19314.0 65 17390.0 66 15288.0 67 13186.0 68 10925.0 69 8664.0 70 7188.0 71 5712.0 72 4992.5 73 4273.0 74 3486.0 75 2058.0 76 1417.0 77 1164.5 78 912.0 79 659.5 80 407.0 81 311.5 82 216.0 83 145.5 84 75.0 85 59.0 86 43.0 87 28.5 88 14.0 89 12.0 90 10.0 91 7.0 92 4.0 93 3.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1038902.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.51725490097809 #Duplication Level Percentage of deduplicated Percentage of total 1 74.46307291804149 26.447239415401985 2 8.608962976054888 6.115334649072488 3 3.5222448086607736 3.753014000785545 4 2.044397331463948 2.9044552456193773 5 1.4446877629381338 2.565567176429875 6 1.1305754771100927 2.409296244318845 7 0.9645119205236533 2.397977101538936 8 0.843172600222226 2.3957740934090634 9 0.7113379668542182 2.2738294700554293 >10 6.174281708323588 38.2814219846805 >50 0.06282549377212072 1.4813297434924908 >100 0.02426678597732606 1.6175752912026535 >500 0.0010785238204784526 0.2806887204254221 >1k 0.0032355714614353583 2.263705210991514 >5k 8.088928653588396E-4 1.969705084172665 >10k+ 5.392619102392263E-4 2.8430865684032516 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTC 18362 1.7674429349447782 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11326 1.0901894500154972 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCG 7238 0.6966970898121286 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGC 6976 0.6714781567462571 No Hit GAACTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCT 6354 0.6116072545822416 No Hit GCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGC 3663 0.3525837855736152 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTT 2908 0.2799109059372299 No Hit GAATGCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTT 2722 0.2620073885698555 No Hit CGTTCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTC 2181 0.2099331794529224 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCT 1931 0.18586931202365575 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCT 1750 0.16844707200486667 No Hit CGCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTG 1703 0.16392306492816452 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTC 1663 0.16007284613948186 No Hit CCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGC 1663 0.16007284613948186 No Hit CGTCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCT 1196 0.11512154178161174 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCGGATAAT 1162 0.11184885581123148 No Hit CTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGCT 1096 0.10549599480990507 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.8127734858533335E-4 0.0 0.0 0.11069379017462667 0.0 2 4.8127734858533335E-4 0.0 0.0 0.7046862937986451 0.0 3 4.8127734858533335E-4 0.0 0.0 1.1252264409925095 0.0 4 4.8127734858533335E-4 0.0 0.0 2.1321549097027437 0.0 5 4.8127734858533335E-4 0.0 0.0 4.8452115791479855 0.0 6 4.8127734858533335E-4 0.0 0.0 6.460955893818666 0.0 7 4.8127734858533335E-4 0.0 0.0 7.562792255669929 0.0 8 4.8127734858533335E-4 0.0 0.0 8.991897214559218 0.0 9 4.8127734858533335E-4 0.0 0.0 9.70226258107117 0.0 10 4.8127734858533335E-4 0.0 0.0 11.378551586193886 0.0 11 4.8127734858533335E-4 0.0 0.0 12.218380559475293 0.0 12 4.8127734858533335E-4 0.0 0.0 13.764243403131383 0.0 13 4.8127734858533335E-4 0.0 0.0 14.274878669980422 0.0 14 4.8127734858533335E-4 0.0 0.0 14.55613715249369 0.0 15 4.8127734858533335E-4 0.0 0.0 14.894667639488613 0.0 16 4.8127734858533335E-4 0.0 0.0 15.319250516410595 0.0 17 4.8127734858533335E-4 0.0 0.0 15.802164207981118 0.0 18 4.8127734858533335E-4 0.0 0.0 16.388648784967206 0.0 19 5.775328183024001E-4 0.0 0.0 16.870118644491974 0.0 20 5.775328183024001E-4 0.0 0.0 17.248402640480045 0.0 21 5.775328183024001E-4 0.0 0.0 17.63217319824199 0.0 22 6.737882880194667E-4 0.0 0.0 18.09843469355146 0.0 23 6.737882880194667E-4 0.0 0.0 18.50963806018277 0.0 24 6.737882880194667E-4 0.0 0.0 18.844222072919294 0.0 25 6.737882880194667E-4 0.0 0.0 19.158496181545516 0.0 26 7.700437577365333E-4 0.0 0.0 19.481529537915993 0.0 27 7.700437577365333E-4 0.0 0.0 19.843931381400747 0.0 28 7.700437577365333E-4 0.0 0.0 20.17370262065142 0.0 29 8.662992274536001E-4 0.0 0.0 20.514061961570967 0.0 30 8.662992274536001E-4 0.0 0.0 21.04288951219653 0.0 31 8.662992274536001E-4 0.0 0.0 21.443601032628678 0.0 32 9.625546971706667E-4 0.0 0.0 21.841136122560165 0.0 33 0.0010588101668877333 0.0 0.0 22.216147432577856 0.0 34 0.0010588101668877333 0.0 0.0 22.583073283139314 0.0 35 0.0010588101668877333 0.0 0.0 22.96848018388645 0.0 36 0.0011550656366048002 0.0 0.0 23.321256480399498 0.0 37 0.0012513211063218668 0.0 0.0 23.690781228643317 0.0 38 0.0012513211063218668 0.0 0.0 24.093225347530375 0.0 39 0.0012513211063218668 0.0 0.0 24.60193550498507 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCGT 20 7.032975E-4 45.0 23 GCGAACG 45 3.8562575E-10 45.0 1 CCCTACG 20 7.032975E-4 45.0 31 CGTTTTT 6110 0.0 43.674305 1 CGTTCGA 40 3.4577897E-7 39.375 14 CGTTAGG 115 0.0 39.130436 2 ACAACGA 305 0.0 39.09836 13 TAACGGG 220 0.0 38.863632 3 TCGATAG 35 6.24771E-6 38.571426 1 CAATCGA 35 6.24771E-6 38.571426 41 TAGTACG 35 6.24771E-6 38.571426 1 GCGTTAG 60 1.546141E-10 37.500004 1 TAGCCGT 30 1.1398463E-4 37.500004 44 AGCGACT 315 0.0 37.142853 19 TACGGCT 945 0.0 36.666668 7 TTGCGAG 105 0.0 36.42857 1 AACGGGA 445 0.0 36.40449 4 TAGGGCG 310 0.0 36.29032 5 TTACACG 610 0.0 36.147537 34 AACGAGC 330 0.0 36.136364 15 >>END_MODULE