SRR2935726.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935726.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	481621
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC	2129	0.44204883092722286	No Hit
CCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC	2010	0.4173406059951704	No Hit
CTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGCT	1342	0.27864233494801927	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTC	1202	0.24957383502795766	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1025	0.21282294584330833	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGC	985	0.20451766015186215	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCG	807	0.16755913882492665	No Hit
TCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC	725	0.150533303157462	No Hit
ACTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC	522	0.10838397827337262	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCCCGC	20	7.0291985E-4	45.000004	13
CGAACCT	20	7.0291985E-4	45.000004	38
CGGCAAA	20	7.0291985E-4	45.000004	10
GTAGCTA	20	7.0291985E-4	45.000004	18
CTAACGG	45	3.8380676E-10	45.000004	2
ACCTAGT	20	7.0291985E-4	45.000004	38
TGCGAAG	35	1.2099554E-7	45.000004	1
AACGCGC	20	7.0291985E-4	45.000004	36
TTGCGTG	20	7.0291985E-4	45.000004	1
CTTTGCG	45	3.8380676E-10	45.000004	1
CATCGGC	20	7.0291985E-4	45.000004	19
ACGTAAG	20	7.0291985E-4	45.000004	1
GCTAACG	20	7.0291985E-4	45.000004	1
GCTCGAA	20	7.0291985E-4	45.000004	30
GTAACGG	20	7.0291985E-4	45.000004	2
GCGTAAG	40	6.8012014E-9	45.000004	1
ACGCGCC	20	7.0291985E-4	45.000004	37
ACGGGCA	50	2.1827873E-11	45.0	5
CGACGGT	30	2.1628657E-6	44.999996	28
TTACTAG	30	2.1628657E-6	44.999996	1