##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935723.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 909566 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00393924135247 33.0 31.0 34.0 30.0 34.0 2 32.027608771655935 33.0 31.0 34.0 30.0 34.0 3 32.06097303549165 33.0 31.0 34.0 30.0 34.0 4 35.733244206577645 37.0 35.0 37.0 33.0 37.0 5 34.82426124107541 37.0 35.0 37.0 33.0 37.0 6 35.285211848288085 37.0 35.0 37.0 33.0 37.0 7 35.86500594789163 37.0 35.0 37.0 35.0 37.0 8 35.82138624354912 37.0 35.0 37.0 35.0 37.0 9 37.67102772091305 39.0 38.0 39.0 35.0 39.0 10 37.33462222642447 39.0 37.0 39.0 34.0 39.0 11 37.2686654954121 39.0 37.0 39.0 34.0 39.0 12 37.3404689709158 39.0 37.0 39.0 34.0 39.0 13 37.32349823981987 39.0 37.0 39.0 34.0 39.0 14 38.537256229894254 40.0 38.0 41.0 34.0 41.0 15 38.542692888696365 40.0 38.0 41.0 34.0 41.0 16 38.594081133199786 40.0 38.0 41.0 34.0 41.0 17 38.505490530648686 40.0 38.0 41.0 34.0 41.0 18 38.45521050698905 40.0 38.0 41.0 34.0 41.0 19 38.352780336995885 40.0 37.0 41.0 34.0 41.0 20 38.25703687253041 40.0 37.0 41.0 34.0 41.0 21 38.28464454476091 40.0 37.0 41.0 34.0 41.0 22 38.341823463058205 40.0 37.0 41.0 34.0 41.0 23 38.30905398838567 40.0 37.0 41.0 34.0 41.0 24 38.289604052921945 40.0 37.0 41.0 34.0 41.0 25 38.16815492223764 40.0 37.0 41.0 34.0 41.0 26 38.15210001253345 40.0 37.0 41.0 34.0 41.0 27 38.16549761094852 40.0 37.0 41.0 34.0 41.0 28 38.03124677043777 40.0 37.0 41.0 34.0 41.0 29 37.976174351284016 40.0 37.0 41.0 33.0 41.0 30 37.890662139965656 40.0 37.0 41.0 33.0 41.0 31 37.86791942530834 40.0 37.0 41.0 33.0 41.0 32 37.72282715053113 40.0 37.0 41.0 33.0 41.0 33 37.52804304470484 40.0 37.0 41.0 33.0 41.0 34 37.39744229665577 40.0 37.0 41.0 32.0 41.0 35 37.35028354182104 40.0 37.0 41.0 32.0 41.0 36 37.24711895563379 40.0 37.0 41.0 32.0 41.0 37 37.24094898006302 40.0 37.0 41.0 32.0 41.0 38 37.20573108493501 40.0 37.0 41.0 32.0 41.0 39 37.098551397039905 40.0 36.0 41.0 31.0 41.0 40 37.031711827399 40.0 36.0 41.0 31.0 41.0 41 36.88915262883617 40.0 36.0 41.0 31.0 41.0 42 36.93056358746919 40.0 36.0 41.0 31.0 41.0 43 36.84619807688502 40.0 36.0 41.0 31.0 41.0 44 36.76369829127298 40.0 36.0 41.0 31.0 41.0 45 36.780866918948156 40.0 36.0 41.0 31.0 41.0 46 36.67548918934965 40.0 35.0 41.0 30.0 41.0 47 36.54286989619225 39.0 35.0 41.0 30.0 41.0 48 36.53727052242498 39.0 35.0 41.0 30.0 41.0 49 36.54282262089832 39.0 35.0 41.0 30.0 41.0 50 36.423378842217055 39.0 35.0 41.0 30.0 41.0 51 35.337836946411805 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 15.0 10 18.0 11 13.0 12 8.0 13 7.0 14 12.0 15 14.0 16 35.0 17 91.0 18 181.0 19 433.0 20 835.0 21 1542.0 22 2586.0 23 3537.0 24 4713.0 25 6586.0 26 8149.0 27 9175.0 28 9596.0 29 10223.0 30 12097.0 31 15626.0 32 20483.0 33 27587.0 34 42704.0 35 57755.0 36 62140.0 37 91315.0 38 169086.0 39 352701.0 40 297.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.5525646297245 17.16346037560771 21.797868433956413 19.486106560711374 2 28.96315385579496 29.80586345575802 25.22015994441305 16.010822744033966 3 28.004125044251875 28.86200671529059 28.203670761659954 14.93019747879758 4 24.902535934720515 24.104572950176237 33.76632371922433 17.226567395878913 5 26.756167227007165 29.602579691853038 26.157749959870973 17.483503121268825 6 23.755285487804073 35.66799990325056 26.15104346468535 14.425671144260011 7 76.6002686995776 4.5114922941270885 14.449308791225707 4.438930215069605 8 77.61767700199876 7.130983348102282 10.240598263347575 5.010741386551388 9 70.77463317670185 6.768722665534992 12.09752783195502 10.359116325808133 10 32.593456659549716 35.58345408689419 18.340505251955328 13.482584001600765 11 22.697198444093118 25.03842491913726 33.97092679365763 18.29344984311199 12 20.773753636349642 21.945411328039967 35.999806501122514 21.281028534487877 13 21.476286492678927 23.340912039368224 38.70956038374346 16.47324108420939 14 18.759826114872368 29.500003298276322 31.90301748306335 19.837153103787962 15 16.35824118315768 26.336296651369995 39.06511457112513 18.240347594347195 16 19.33163728635415 27.444957265333137 31.58440399047458 21.639001457838134 17 19.412774883845703 26.801903325322186 32.906682967481196 20.87863882335092 18 20.055389053680546 25.58802769672569 32.99199838164576 21.36458486794801 19 19.187062840959314 28.31163433989397 30.61844879865782 21.882854020488892 20 20.54375383424622 27.633728613426623 32.79080352607727 19.031714026249883 21 20.152578262599967 29.65502228535367 32.43513939615157 17.75726005589479 22 19.205863015987845 24.816340980203748 32.53782573227231 23.439970271536094 23 17.803216039297862 28.879047809614693 32.158304070292864 21.159432080794577 24 19.41915155139924 26.106186906722545 31.623653478692038 22.85100806318618 25 18.01991279357408 31.41828080645055 29.5223216347137 21.039484765261673 26 18.340615194499353 27.76467018336217 31.001158794414042 22.893555827724434 27 21.613604730168014 27.319842650230992 29.074085882717693 21.992466736883305 28 17.654903547406125 27.5103730790289 32.93087032716702 21.903853046397952 29 19.87310431568462 26.254499398614286 31.02138822251491 22.85100806318618 30 21.007821312582045 27.446936231125612 30.801723019549982 20.743519436742357 31 20.914590035247578 25.789222552294174 28.74052020414132 24.555667208316933 32 22.098561291868872 27.267619941818406 30.062249468427797 20.571569297884924 33 20.29154563824945 24.69595389449474 29.501432551348667 25.511067915907148 34 19.784600567743297 25.785814333429354 31.95106237480293 22.478522724024426 35 21.906381724910563 24.51377909904284 30.970264939542595 22.609574236504002 36 19.48401765237487 26.45052695461352 31.25402664567497 22.81142874733664 37 20.280111613670694 24.65923308478989 35.05386085231858 20.006794449220838 38 19.82846764280987 24.961025368142607 30.315227262232757 24.895279726814767 39 20.345307542278405 24.47057167924043 34.10032916797682 21.083791610504353 40 21.47430752688645 24.182632156435048 32.71736190666758 21.62569841001093 41 18.724974328415968 25.825393649278887 33.269273477680564 22.18035854462458 42 21.797648548868363 25.163539534239405 32.42007726761994 20.61873464927229 43 21.253982668657358 24.783468159539822 31.577917380377013 22.384631791425804 44 20.738901849893246 24.563802956574893 31.172009507831206 23.525285685700652 45 19.41024620533309 23.714166976338166 31.231268539061485 25.644318279267253 46 23.34179157972044 25.350881629260545 29.565858882148188 21.741467908870824 47 18.7196970863027 24.3393002816728 34.55659072568676 22.384411906337746 48 20.171818207804602 24.771814249873017 30.826130264323865 24.23023727799852 49 19.89762150300253 22.528986351732584 34.534272389249374 23.039119756015506 50 20.124982684049318 22.26457453334887 33.89462666810325 23.715816114498566 51 19.703902740427854 22.541739686839655 31.074380528735684 26.679977043996807 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 174.0 1 550.5 2 927.0 3 5114.5 4 9302.0 5 6238.5 6 3175.0 7 3114.5 8 3054.0 9 3056.5 10 3059.0 11 2980.0 12 2901.0 13 2856.0 14 2811.0 15 2804.5 16 2798.0 17 2691.5 18 2585.0 19 2771.0 20 2957.0 21 3524.0 22 4091.0 23 4433.5 24 4776.0 25 6021.5 26 8794.5 27 10322.0 28 12583.0 29 14844.0 30 17568.5 31 20293.0 32 23570.0 33 26847.0 34 30127.0 35 33407.0 36 34870.5 37 36334.0 38 40236.5 39 44139.0 40 46085.5 41 48032.0 42 52289.5 43 56547.0 44 62100.0 45 67653.0 46 98266.0 47 128879.0 48 112375.5 49 95872.0 50 90806.5 51 85741.0 52 71123.5 53 56506.0 54 48584.5 55 40663.0 56 34590.5 57 28518.0 58 24868.0 59 21218.0 60 18145.5 61 15073.0 62 12942.5 63 10812.0 64 9084.0 65 7356.0 66 5910.0 67 4464.0 68 3422.5 69 2381.0 70 1909.0 71 1437.0 72 1255.0 73 1073.0 74 853.0 75 485.5 76 338.0 77 266.5 78 195.0 79 127.5 80 60.0 81 42.0 82 24.0 83 17.5 84 11.0 85 7.0 86 3.0 87 6.0 88 9.0 89 6.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 909566.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.41916873156322 #Duplication Level Percentage of deduplicated Percentage of total 1 74.50901151939932 25.645382395081928 2 9.294066630992255 6.397880951490273 3 3.4629670769719736 3.575773444024398 4 1.9562881313758649 2.693352451255216 5 1.3767219539259925 2.369281261431307 6 1.0073340274740652 2.0802959916404995 7 0.8641532750403814 2.0820406168483485 8 0.7150616470906558 1.968946198774623 9 0.6340555772777837 1.9641299309561482 >10 6.058357469294032 40.0467355814161 >50 0.08763496557426811 1.927573407548807 >100 0.027927589960389257 1.6914587351591486 >500 0.0012840271246119125 0.32759652163684205 >1k 0.0038520813738357374 2.7277244270389063 >5k 6.420135623059562E-4 1.7049382547649612 >10k+ 6.420135623059562E-4 2.796889830932553 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTC 14854 1.6330865489695086 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGC 10460 1.1499990105171038 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCG 9813 1.0788661845319636 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5618 0.6176572123408307 No Hit GAACTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCT 4317 0.4746219625623649 No Hit GCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGC 4052 0.4454871883953446 No Hit CCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGC 2251 0.24748066660363294 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCT 2224 0.24451221791491765 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTC 1790 0.19679715380742027 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTT 1676 0.18426370378840018 No Hit CGCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTG 1587 0.17447881737004242 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGCTCTGTT 1541 0.16942146034482378 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTA 1353 0.14875226206784334 No Hit CTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGCT 1315 0.14457444539483666 Illumina Single End Adapter 1 (95% over 21bp) CGTTTCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTT 1295 0.1423755945143068 No Hit CGTTCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTC 1287 0.14149605416209488 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.298276320794753E-4 0.0 0.0 0.15183065330058512 0.0 2 3.298276320794753E-4 0.0 0.0 1.0012467484492604 0.0 3 3.298276320794753E-4 0.0 0.0 1.4897214715589633 0.0 4 3.298276320794753E-4 0.0 0.0 2.4142283242777323 0.0 5 3.298276320794753E-4 0.0 0.0 5.102213583181429 0.0 6 3.298276320794753E-4 0.0 0.0 6.537953265623385 0.0 7 3.298276320794753E-4 0.0 0.0 7.767220850383589 0.0 8 3.298276320794753E-4 0.0 0.0 9.581932482084863 0.0 9 3.298276320794753E-4 0.0 0.0 10.391879203928028 0.0 10 3.298276320794753E-4 0.0 0.0 12.754764360145389 0.0 11 3.298276320794753E-4 0.0 0.0 13.852100892073802 0.0 12 3.298276320794753E-4 0.0 0.0 16.183872308331665 0.0 13 3.298276320794753E-4 0.0 0.0 16.821099293509214 0.0 14 4.39770176105967E-4 0.0 0.0 17.150267270324527 0.0 15 4.39770176105967E-4 0.0 0.0 17.604220034609913 0.0 16 4.39770176105967E-4 0.0 0.0 18.18966408155098 0.0 17 4.39770176105967E-4 0.0 0.0 18.91924280371078 0.0 18 4.39770176105967E-4 0.0 0.0 19.811866318661867 0.0 19 4.39770176105967E-4 0.0 0.0 20.494499574522354 0.0 20 4.39770176105967E-4 0.0 0.0 21.02958993629929 0.0 21 4.39770176105967E-4 0.0 0.0 21.5683084020291 0.0 22 4.39770176105967E-4 0.0 0.0 22.164306933196713 0.0 23 4.39770176105967E-4 0.0 0.0 22.729741437124957 0.0 24 4.39770176105967E-4 0.0 0.0 23.18501351193866 0.0 25 4.39770176105967E-4 0.0 0.0 23.577838221745317 0.0 26 4.39770176105967E-4 0.0 0.0 23.97879867980993 0.0 27 4.39770176105967E-4 0.0 0.0 24.44143690507341 0.0 28 4.39770176105967E-4 0.0 0.0 24.865925067559694 0.0 29 4.39770176105967E-4 0.0 0.0 25.32009771693313 0.0 30 4.39770176105967E-4 0.0 0.0 25.930168893736134 0.0 31 5.497127201324588E-4 0.0 0.0 26.397424705848724 0.0 32 5.497127201324588E-4 0.0 0.0 26.843901377140305 0.0 33 5.497127201324588E-4 0.0 0.0 27.269269079978802 0.0 34 5.497127201324588E-4 0.0 0.0 27.679794539373724 0.0 35 5.497127201324588E-4 0.0 0.0 28.11450735845447 0.0 36 6.596552641589506E-4 0.0 0.0 28.530200117418637 0.0 37 6.596552641589506E-4 0.0 0.0 28.942044887341876 0.0 38 6.596552641589506E-4 0.0 0.0 29.362355233155153 0.0 39 6.596552641589506E-4 0.0 0.0 29.790031729418207 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGAGCG 25 3.8901606E-5 45.000004 1 CCACGCG 25 3.8901606E-5 45.000004 1 CCGTTAG 25 3.8901606E-5 45.000004 1 TAGTACG 25 3.8901606E-5 45.000004 1 CCTAGCG 20 7.03251E-4 45.0 1 TCGTACC 20 7.03251E-4 45.0 45 TTGCACG 20 7.03251E-4 45.0 1 GCGTAAG 40 6.8121153E-9 45.0 1 CGGCTAG 30 2.1650012E-6 44.999996 26 CGTTTTT 3150 0.0 43.214287 1 CTGTACG 100 0.0 42.750004 1 TAGGGCG 255 0.0 40.588234 5 CGTATGG 95 0.0 40.263157 2 CTACGAA 45 1.927583E-8 40.0 11 ACGTAAG 40 3.457153E-7 39.375 1 CGTAAGG 120 0.0 39.374996 2 TGCACGG 110 0.0 38.863636 2 ACGGGCG 145 0.0 38.793102 5 GCGAACG 35 6.2468534E-6 38.571426 1 ACGTCGG 35 6.2468534E-6 38.571426 2 >>END_MODULE