##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935722.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 920796 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03946693947411 33.0 31.0 34.0 30.0 34.0 2 32.07467017667322 33.0 31.0 34.0 30.0 34.0 3 32.12717040473677 33.0 31.0 34.0 30.0 34.0 4 35.785189118979666 37.0 35.0 37.0 35.0 37.0 5 34.817949904213314 37.0 35.0 37.0 33.0 37.0 6 35.29714942289063 37.0 35.0 37.0 33.0 37.0 7 35.85764925129996 37.0 35.0 37.0 35.0 37.0 8 35.82126985781867 37.0 35.0 37.0 35.0 37.0 9 37.644546674833514 39.0 37.0 39.0 35.0 39.0 10 37.335257755246545 39.0 37.0 39.0 34.0 39.0 11 37.30245895942207 39.0 37.0 39.0 34.0 39.0 12 37.251760433364176 39.0 37.0 39.0 34.0 39.0 13 37.18898648560593 39.0 37.0 39.0 34.0 39.0 14 38.35061946402895 40.0 38.0 41.0 34.0 41.0 15 38.41004304970917 40.0 38.0 41.0 34.0 41.0 16 38.43514632991455 40.0 38.0 41.0 34.0 41.0 17 38.37413933162177 40.0 38.0 41.0 34.0 41.0 18 38.35010251999357 40.0 37.0 41.0 34.0 41.0 19 38.2715900155952 40.0 37.0 41.0 34.0 41.0 20 38.226526831133064 40.0 37.0 41.0 34.0 41.0 21 38.17564259618852 40.0 37.0 41.0 34.0 41.0 22 38.21169292655485 40.0 37.0 41.0 34.0 41.0 23 38.183054661401655 40.0 37.0 41.0 34.0 41.0 24 38.129735576609804 40.0 37.0 41.0 34.0 41.0 25 37.96615645593595 40.0 37.0 41.0 33.0 41.0 26 37.97422013127772 40.0 37.0 41.0 34.0 41.0 27 37.96831654351235 40.0 37.0 41.0 34.0 41.0 28 37.827872840455434 40.0 36.0 41.0 33.0 41.0 29 37.77496970012902 40.0 36.0 41.0 33.0 41.0 30 37.66713039587487 40.0 36.0 41.0 33.0 41.0 31 37.65554911185539 40.0 36.0 41.0 33.0 41.0 32 37.5693486939561 40.0 36.0 41.0 33.0 41.0 33 37.452727857201815 40.0 36.0 41.0 33.0 41.0 34 37.384261008953125 40.0 36.0 41.0 33.0 41.0 35 37.303407052159216 40.0 36.0 41.0 32.0 41.0 36 37.253224384119825 40.0 35.0 41.0 32.0 41.0 37 37.19969895612057 40.0 35.0 41.0 32.0 41.0 38 37.13504511314124 40.0 35.0 41.0 32.0 41.0 39 37.04341569685359 40.0 35.0 41.0 32.0 41.0 40 36.91918731184757 39.0 35.0 41.0 31.0 41.0 41 36.80653152272599 39.0 35.0 41.0 31.0 41.0 42 36.816820446657026 39.0 35.0 41.0 31.0 41.0 43 36.73946563625385 39.0 35.0 41.0 31.0 41.0 44 36.627263802188544 39.0 35.0 41.0 31.0 41.0 45 36.59415766358672 39.0 35.0 41.0 31.0 41.0 46 36.453975690598135 39.0 35.0 41.0 31.0 41.0 47 36.326910629498826 39.0 35.0 41.0 30.0 41.0 48 36.28338958900777 39.0 35.0 41.0 30.0 41.0 49 36.270863470301784 39.0 35.0 40.0 30.0 41.0 50 36.15806758500254 38.0 35.0 40.0 30.0 41.0 51 34.993135287294905 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 12.0 9 18.0 10 25.0 11 19.0 12 26.0 13 21.0 14 21.0 15 37.0 16 65.0 17 107.0 18 225.0 19 420.0 20 811.0 21 1434.0 22 2185.0 23 3068.0 24 3988.0 25 5225.0 26 6469.0 27 7855.0 28 9134.0 29 10535.0 30 13192.0 31 17027.0 32 21883.0 33 31009.0 34 52761.0 35 71019.0 36 69564.0 37 101520.0 38 176907.0 39 314024.0 40 189.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.697626835911535 17.38039696089036 20.8993088588569 18.0226673443412 2 28.586027741215208 27.62685763187503 26.057346035386775 17.729768591522987 3 31.365253541501048 26.357846906372313 26.24739898956989 16.029500562556745 4 28.120126499246307 24.841441535367224 28.649994135508845 18.388437829877628 5 26.214058271321772 30.210491791884415 24.018240739534054 19.557209197259763 6 25.270961211821074 35.91544706970925 24.068197516062188 14.745394202407484 7 77.33080943010178 5.976459498086438 11.597357069318285 5.095374002493495 8 77.7363281334845 7.342560132754704 9.244175691466948 5.676936042293841 9 71.07643821215557 7.308567804377951 12.014061746575788 9.60093223689069 10 38.094865746593165 26.270639750824287 18.494433077467757 17.14006142511479 11 30.225587426530957 24.875108058679665 25.61750919856298 19.281795316226397 12 27.156286517317625 21.12932723426253 29.989704559967677 21.724681688452165 13 24.653560614946198 22.40735189987793 32.34429775976438 20.59478972541149 14 20.67591518642566 27.58091911780677 29.05279779668895 22.690367899078623 15 19.40799047780399 24.656710063901233 35.108427925403674 20.826871532891108 16 22.08263285244506 23.891828374580253 30.854499802344925 23.17103897062976 17 21.58197907028267 24.029643916785044 29.893374862618867 24.495002150313425 18 22.351204827127834 24.644872479897828 29.94876172355223 23.055160969422108 19 24.193741067511155 26.94940030147829 26.255218311113428 22.601640319897133 20 25.119896263667524 25.094809273715352 27.92507786741037 21.860216595206754 21 23.804512617344123 28.061264384293587 27.114366265709233 21.019856732653054 22 22.04679429537053 24.56602765433386 27.780529020543092 25.60664902975252 23 21.873574602843625 27.034978431704744 27.70027237303377 23.391174592417865 24 22.99108597344037 24.31819860207907 28.137828574407358 24.552886850073197 25 22.40919812857571 27.033458008071275 26.237624837640478 24.319719025712537 26 20.683843109657296 25.844595328389786 27.864803930512295 25.606757631440622 27 22.57296947423751 25.47306895338381 27.353507182915653 24.60045438946303 28 20.823830685624177 26.05159014591723 28.923018779403908 24.201560389054688 29 22.136173484680647 24.819395392681983 27.004678560723548 26.039752561913822 30 21.7138215196417 24.619133879817028 29.16682956919882 24.50021503134245 31 22.74792679377408 24.818309375800936 25.839491049048867 26.594272781376116 32 23.05635558799126 27.504137724316784 24.6488907423577 24.790615945334256 33 21.72620211208563 25.075478173232725 25.96785824438855 27.230461470293093 34 21.304067350422894 24.886076829178233 27.305831041837713 26.50402477856116 35 20.3024339810338 25.894552104917917 27.50402912262868 26.2989847914196 36 20.344897241082716 26.19179492526032 26.03247624881081 27.430831584846153 37 20.400609907080398 27.105786732348967 28.99263246147898 23.500970899091655 38 20.197416148636616 27.378811376244034 25.524437551857304 26.899334923262046 39 21.97946124874565 25.18331964952063 26.994252798665503 25.842966303068216 40 21.94199366634955 24.52758265674482 29.169218806337128 24.36120487056851 41 19.278754468959466 25.338077055069746 28.69169718374102 26.691471292229767 42 21.252590150261298 25.79040308602557 27.956789560336926 25.000217203376206 43 21.60967250074935 23.973496844034944 27.913674690159386 26.50315596505632 44 21.904851889017763 24.240113988331835 27.932136977137173 25.92289714551323 45 20.926567882571167 23.44232598751515 28.215478781402176 27.415627348511507 46 23.12542626162581 24.727409762857352 27.23274210574329 24.91442186977354 47 20.474024648239133 24.29593525601762 30.36861584976477 24.86142424597848 48 20.61868209679451 24.292785807062586 28.207007849730015 26.881524246412887 49 20.6464841289493 23.102076898683315 30.209622978379574 26.04181599398781 50 20.532778161503742 22.54071477287043 29.91411778504685 27.01238928057898 51 19.62008957467235 22.99228059200952 28.1645445896811 29.223085243637026 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 345.0 1 1016.5 2 1688.0 3 3111.5 4 4535.0 5 3169.5 6 1804.0 7 1740.5 8 1677.0 9 1691.5 10 1706.0 11 1803.5 12 1901.0 13 1893.5 14 1886.0 15 1912.0 16 1938.0 17 1856.5 18 1775.0 19 1954.0 20 2133.0 21 2469.5 22 2806.0 23 3107.0 24 3408.0 25 4207.0 26 5845.5 27 6685.0 28 8567.0 29 10449.0 30 12199.0 31 13949.0 32 15394.0 33 16839.0 34 19320.5 35 21802.0 36 23459.5 37 25117.0 38 26953.0 39 28789.0 40 32743.5 41 36698.0 42 39908.5 43 43119.0 44 49739.0 45 56359.0 46 76620.5 47 96882.0 48 93719.0 49 90556.0 50 89272.5 51 87989.0 52 76547.5 53 65106.0 54 57666.5 55 50227.0 56 47655.5 57 45084.0 58 43505.5 59 41927.0 60 40864.0 61 39801.0 62 36794.0 63 33787.0 64 29199.5 65 24612.0 66 20709.0 67 16806.0 68 14285.5 69 11765.0 70 10229.5 71 8694.0 72 7316.0 73 5938.0 74 5098.0 75 3292.0 76 2326.0 77 1846.5 78 1367.0 79 1019.5 80 672.0 81 511.5 82 351.0 83 231.0 84 111.0 85 96.0 86 81.0 87 52.0 88 23.0 89 15.5 90 8.0 91 8.0 92 8.0 93 5.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 920796.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.707037496089256 #Duplication Level Percentage of deduplicated Percentage of total 1 73.11380329176704 22.45108299161985 2 9.767326227750978 5.998513054241707 3 3.580684346283965 3.298566254490047 4 1.9100457504846422 2.3460738591751142 5 1.2696519705271097 1.9493625332979783 6 0.9232634507789778 1.70104112411033 7 0.7462955480377448 1.6041567763731657 8 0.640320848003945 1.5729885031347848 9 0.5661671217318653 1.5646783532465989 >10 7.2495427061288265 47.365779645077446 >50 0.17939980461409924 3.4539198945330014 >100 0.04672240226468015 2.5545443107751904 >500 0.003566595592723525 0.7677322880400272 >1k 0.002139957355634115 1.3594666036292238 >5k 0.0010699786778170575 2.012093808255546 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTC 7385 0.8020234666527657 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGC 5915 0.642378985138945 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCG 5072 0.5508277620667336 No Hit GCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGC 3246 0.3525210795876611 TruSeq Adapter, Index 23 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2408 0.26151286495597287 No Hit CCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGC 2302 0.25000108601688104 TruSeq Adapter, Index 23 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCT 1933 0.20992706310626894 No Hit CTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGCT 1342 0.14574346543642674 TruSeq Adapter, Index 20 (95% over 23bp) GAATGACTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCT 1182 0.12836719533968435 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTC 943 0.10241139188267541 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.430084405231995E-4 0.0 0.0 0.1546488038610072 0.0 2 5.430084405231995E-4 0.0 0.0 0.9034574433424993 0.0 3 5.430084405231995E-4 0.0 0.0 1.2693365305670312 0.0 4 5.430084405231995E-4 0.0 0.0 1.8640393746280393 0.0 5 5.430084405231995E-4 0.0 0.0 3.6406543903318433 0.0 6 5.430084405231995E-4 0.0 0.0 4.9098823192107695 0.0 7 5.430084405231995E-4 0.0 0.0 5.943010178150209 0.0 8 5.430084405231995E-4 0.0 0.0 7.663043714351496 0.0 9 5.430084405231995E-4 0.0 0.0 8.449537139605297 0.0 10 5.430084405231995E-4 0.0 0.0 10.3009787184132 0.0 11 5.430084405231995E-4 0.0 0.0 11.439558816502243 0.0 12 5.430084405231995E-4 0.0 0.0 13.190109427060934 0.0 13 5.430084405231995E-4 0.0 0.0 13.740394180687145 0.0 14 5.430084405231995E-4 0.0 0.0 14.009183358746128 0.0 15 5.430084405231995E-4 0.0 0.0 14.41296443511918 0.0 16 5.430084405231995E-4 0.0 0.0 14.975086772748796 0.0 17 5.430084405231995E-4 0.0 0.0 15.641901137711285 0.0 18 6.516101286278393E-4 0.0 0.0 16.435670876068098 0.0 19 7.602118167324793E-4 0.0 0.0 16.929591353568 0.0 20 9.77415192941759E-4 0.0 0.0 17.423511831067902 0.0 21 9.77415192941759E-4 0.0 0.0 17.91526027480571 0.0 22 9.77415192941759E-4 0.0 0.0 18.46684824868918 0.0 23 9.77415192941759E-4 0.0 0.0 18.9917202072989 0.0 24 9.77415192941759E-4 0.0 0.0 19.422977510762426 0.0 25 9.77415192941759E-4 0.0 0.0 19.805472656266968 0.0 26 9.77415192941759E-4 0.0 0.0 20.15582170209254 0.0 27 0.001086016881046399 0.0 0.0 20.55091464341722 0.0 28 0.001194618569151039 0.0 0.0 20.933626992297967 0.0 29 0.001194618569151039 0.0 0.0 21.347616627352856 0.0 30 0.0013032202572556787 0.0 0.0 21.877049856862975 0.0 31 0.0013032202572556787 0.0 0.0 22.295166356065838 0.0 32 0.0013032202572556787 0.0 0.0 22.697752813869737 0.0 33 0.0013032202572556787 0.0 0.0 23.100990881802268 0.0 34 0.0013032202572556787 0.0 0.0 23.48402903574733 0.0 35 0.0013032202572556787 0.0 0.0 23.897041255609277 0.0 36 0.0013032202572556787 0.0 0.0 24.29995351847749 0.0 37 0.0013032202572556787 0.0 0.0 24.7144861619729 0.0 38 0.0013032202572556787 0.0 0.0 25.11631240796007 0.0 39 0.0013032202572556787 0.0 0.0 25.522591323159528 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 20 7.0325565E-4 45.0 1 CGACGGT 35 1.2115743E-7 45.0 28 CGGGTCA 65 0.0 41.538464 6 CTAGACG 45 1.927583E-8 40.000004 1 TCGATAG 40 3.4572258E-7 39.375 1 CACGGGC 175 0.0 38.571426 4 ACCGCTT 35 6.246937E-6 38.571426 45 ACGGGCT 285 0.0 37.894737 5 ACGATTC 30 1.1397454E-4 37.500004 11 GCCGATA 30 1.1397454E-4 37.500004 9 GTCGTAG 30 1.1397454E-4 37.500004 1 TTCGAAC 30 1.1397454E-4 37.500004 25 GCGTATG 60 1.546141E-10 37.500004 1 ATGGGCG 350 0.0 37.285713 5 AAGGGCG 225 0.0 37.0 5 CGTTTTT 1190 0.0 36.113445 1 CCCGTAC 25 0.002106891 36.000004 33 AACGACT 25 0.002106891 36.000004 33 TAGTGCG 50 4.8770744E-8 36.000004 1 CCAAACG 25 0.002106891 36.000004 1 >>END_MODULE