##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935721.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 362891 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.780837772223617 31.0 31.0 34.0 30.0 34.0 2 31.82472422848734 33.0 31.0 34.0 30.0 34.0 3 31.91962324775208 33.0 31.0 34.0 30.0 34.0 4 35.606110374740624 37.0 35.0 37.0 33.0 37.0 5 34.64858318338013 37.0 35.0 37.0 32.0 37.0 6 35.07506937344822 37.0 35.0 37.0 32.0 37.0 7 35.576087585528434 37.0 35.0 37.0 33.0 37.0 8 35.40032957554748 37.0 35.0 37.0 33.0 37.0 9 37.294146176124514 39.0 37.0 39.0 34.0 39.0 10 37.088715344276935 39.0 37.0 39.0 33.0 39.0 11 36.97789143296472 39.0 37.0 39.0 33.0 39.0 12 36.791008870432165 39.0 35.0 39.0 33.0 39.0 13 36.4856444497108 39.0 35.0 39.0 32.0 39.0 14 37.574999104414275 40.0 36.0 41.0 32.0 41.0 15 37.501404002854855 40.0 36.0 41.0 32.0 41.0 16 37.828604181420864 40.0 36.0 41.0 33.0 41.0 17 37.551826857100345 39.0 36.0 41.0 32.0 41.0 18 37.64308290919312 39.0 36.0 41.0 33.0 41.0 19 37.56038865664897 39.0 36.0 41.0 32.0 41.0 20 37.27116957984629 39.0 35.0 41.0 32.0 41.0 21 37.55164773995497 39.0 35.0 41.0 33.0 41.0 22 37.573692927077275 39.0 35.0 41.0 33.0 41.0 23 37.4615821279668 39.0 35.0 41.0 33.0 41.0 24 37.427301861991616 39.0 35.0 41.0 32.0 41.0 25 37.44508130540576 39.0 35.0 41.0 33.0 41.0 26 37.300892003383936 39.0 35.0 41.0 32.0 41.0 27 37.253031902141416 39.0 35.0 41.0 32.0 41.0 28 37.15615432733245 39.0 35.0 41.0 32.0 41.0 29 37.0611175256482 39.0 35.0 41.0 32.0 41.0 30 37.04170122709023 39.0 35.0 41.0 32.0 41.0 31 37.081746309497895 39.0 35.0 41.0 32.0 41.0 32 36.83191922643439 39.0 35.0 41.0 31.0 41.0 33 36.63700119319575 39.0 35.0 41.0 31.0 41.0 34 36.55143279938053 39.0 35.0 41.0 31.0 41.0 35 36.51075116219471 39.0 35.0 41.0 31.0 41.0 36 36.50015844978244 39.0 35.0 41.0 30.0 41.0 37 36.40434731090052 39.0 35.0 41.0 30.0 41.0 38 36.39309599852297 39.0 35.0 41.0 30.0 41.0 39 36.27367446423306 39.0 35.0 41.0 30.0 41.0 40 36.07375217351767 39.0 35.0 40.0 30.0 41.0 41 36.02191291599957 39.0 35.0 40.0 29.0 41.0 42 36.14888217123048 39.0 35.0 40.0 30.0 41.0 43 35.980652592651786 38.0 35.0 40.0 30.0 41.0 44 35.93173156677901 38.0 35.0 40.0 30.0 41.0 45 35.996503082192724 38.0 35.0 40.0 30.0 41.0 46 35.82846088770457 38.0 35.0 40.0 29.0 41.0 47 35.48707738687374 38.0 35.0 40.0 28.0 41.0 48 35.566238898181545 38.0 35.0 40.0 28.0 41.0 49 35.6727088850371 38.0 35.0 40.0 29.0 41.0 50 35.49201550878914 38.0 35.0 40.0 28.0 41.0 51 34.27451769264049 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 5.0 10 3.0 11 4.0 12 2.0 13 3.0 14 4.0 15 1.0 16 14.0 17 42.0 18 125.0 19 256.0 20 556.0 21 1172.0 22 1841.0 23 2550.0 24 2886.0 25 3077.0 26 3198.0 27 3530.0 28 3939.0 29 4621.0 30 6110.0 31 8243.0 32 11151.0 33 15691.0 34 25865.0 35 36430.0 36 28213.0 37 38357.0 38 63456.0 39 101463.0 40 79.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.703905580463555 15.283652667054296 18.655188472571655 16.3572532799105 2 21.721122871606074 39.190831406675834 23.043282969266254 16.044762752451838 3 25.10423240036264 38.29000994789069 23.208621872683533 13.397135779063134 4 24.036694213965074 20.37333524391622 39.70227974791328 15.887690794205422 5 33.348856819265286 26.094336866993117 22.10278017366096 18.454026140080632 6 21.20113202035873 40.5157471527263 24.278364577793333 14.004756249121636 7 66.01596622677333 5.541884477708183 23.375889729974013 5.066259565544475 8 63.623236729486266 17.27460862903737 12.109145721442527 6.99300892003384 9 59.303206748031776 6.604186932164204 12.36790110529057 21.72470521451345 10 43.62880313923465 20.250708890548403 20.20248504371836 15.91800292649859 11 34.62086411622223 20.913166763573635 25.696972369113592 18.768996751090548 12 25.611822833853694 17.33440619910662 30.88337820447462 26.17039276256507 13 24.233998638709693 22.576751696790495 37.33352439162172 15.855725272878082 14 19.639781642421553 32.63018371907818 26.754590221306124 20.975444417194144 15 13.733876012356328 21.650027143136644 43.87433141080931 20.741765433697722 16 15.676332562670334 23.6685395890226 29.815564453238025 30.839563395069042 17 16.201008016181166 23.889818154762725 33.03140612470411 26.877767704351996 18 17.99989528536117 22.471210363442466 31.93300467633532 27.595889674861045 19 19.462317886087007 25.663353458752074 27.413190186584952 27.461138468575964 20 21.982358339005376 24.749029322854522 33.434833049042275 19.833779289097826 21 19.9368405388946 32.404771680752624 28.151152825504077 19.507234954848702 22 17.18064101892855 22.322129785527885 31.775657153249874 28.72157204229369 23 18.323959536059036 31.011515854623013 27.814137027371856 22.850387581946094 24 21.460989663562888 23.054581127666435 27.368824247501315 28.115604961269362 25 16.155815382580442 34.22019284027436 25.61016944481952 24.013822332325685 26 16.559517871757635 25.126277587484946 30.701780975554644 27.612423565202775 27 23.96918082840302 27.614628083915004 24.621442802384188 23.79474828529779 28 15.723729714983287 25.946358548434656 33.854793863722165 24.475117872859894 29 20.783100159552042 24.716512671849124 29.411310834382775 25.08907633421606 30 21.27498339721845 29.76320713382255 28.176780355533754 20.785029113425242 31 23.62004017735353 22.9250656533229 22.069712392977507 31.385181776346066 32 24.45059260218633 28.88966659410126 24.90775467013511 21.7519861335773 33 21.944330391219403 26.96594845284121 21.489648406821882 29.6000727491175 34 21.830246547861478 26.05934013243646 23.80384192498574 28.30657139471632 35 21.81178370364655 23.081862046730286 24.496336365465112 30.610017884158054 36 19.241314885185908 32.03579036129306 22.96116464723567 25.76173010628536 37 22.68174190046047 21.768520023919027 32.424336784323664 23.125401291296836 38 17.314014401018486 28.40715256096183 22.02782653744513 32.251006500574555 39 20.220121193416205 24.584792678793356 29.852214576828857 25.342871550961583 40 19.088376399524925 26.414267645105554 26.868674064664045 27.628681890705476 41 17.394203769175867 27.814412592210886 22.41113722853419 32.38024641007906 42 19.55352984780554 21.210501224885707 29.716361111187656 29.519607816121095 43 22.98651661242632 27.63667327103731 23.330421531534263 26.046388585002106 44 21.920631815062926 22.2543408351268 29.46118807024699 26.363839279563283 45 18.412140284548254 21.158143905470236 27.872005643567903 32.55771016641361 46 27.707217869828682 25.873333866092025 24.90279450303259 21.516653761046705 47 16.867048232113778 22.707920560168205 36.75731831321251 23.667712894505513 48 21.248804737510714 24.872482370739423 24.80607124453348 29.07264164721638 49 19.553254282966513 18.528979776296463 35.844372001510095 26.07339393922693 50 22.27280367934173 20.391798088131146 29.920830221747025 27.414568010780094 51 19.75744782868685 21.324033938565577 25.066755582254725 33.85176265049285 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 131.0 1 402.0 2 673.0 3 1186.0 4 1699.0 5 1173.5 6 648.0 7 659.5 8 671.0 9 685.0 10 699.0 11 749.0 12 799.0 13 796.5 14 794.0 15 785.0 16 776.0 17 774.0 18 772.0 19 759.5 20 747.0 21 872.5 22 998.0 23 1055.5 24 1113.0 25 1289.5 26 1691.0 27 1916.0 28 2181.5 29 2447.0 30 3177.0 31 3907.0 32 4351.5 33 4796.0 34 5688.5 35 6581.0 36 7356.5 37 8132.0 38 8438.0 39 8744.0 40 10653.5 41 12563.0 42 15563.5 43 18564.0 44 21571.5 45 24579.0 46 51971.5 47 79364.0 48 59532.0 49 39700.0 50 37720.0 51 35740.0 52 30243.0 53 24746.0 54 21316.5 55 17887.0 56 15862.5 57 13838.0 58 12574.5 59 11311.0 60 10523.5 61 9736.0 62 8759.5 63 7783.0 64 6976.5 65 6170.0 66 5183.0 67 4196.0 68 3532.5 69 2869.0 70 2347.5 71 1826.0 72 1561.0 73 1296.0 74 1183.0 75 770.5 76 471.0 77 389.0 78 307.0 79 259.5 80 212.0 81 129.0 82 46.0 83 54.0 84 62.0 85 36.5 86 11.0 87 21.0 88 31.0 89 16.5 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 362891.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.611317442985573 #Duplication Level Percentage of deduplicated Percentage of total 1 72.74188195201562 20.81241075929302 2 11.406554926369052 6.527131278583917 3 4.030551700248732 3.4595818249854506 4 1.9441703971490163 2.2250110558434337 5 1.2760664221853286 1.8254970741739645 6 0.8410278518678727 1.443774890891037 7 0.6664329788641418 1.334726785892952 8 0.5247656176580079 1.2011388535982126 9 0.4459509538014209 1.1483319872893183 >10 5.819310651304707 36.622170267114114 >50 0.2454226675653977 4.241949121471529 >100 0.04090377792756628 2.06488526645078 >500 0.0069835718412918045 1.468312110951453 >1k 0.0069835718412918045 4.6224429091655965 >5k 0.0 0.0 >10k+ 0.0029929593605536307 11.002635814295237 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGC 14565 4.013601880454462 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCG 12034 3.3161472728725703 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTC 11947 3.2921731318770653 No Hit GCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 3713 1.0231722473139317 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCT 2579 0.7106817198552734 No Hit GAACTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCT 2297 0.6329724352491519 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGCTACCAT 2282 0.62883896266372 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCTACCATCGTA 2003 0.551956372574685 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTC 1974 0.5439649922428498 No Hit CCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 1346 0.37091027333276383 No Hit CTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGCT 991 0.2730847554775401 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 966 0.2661956345018201 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTT 723 0.19923337861782187 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATG 697 0.1920686928030731 No Hit AATGCCTTGGTTTTTTCTAATGTAGATGATATGGCTGTGATACATTAGGGC 677 0.1865573960224971 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGCTACCATCGT 554 0.1526629208219548 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTAT 536 0.14770275371943642 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAGCTACCA 471 0.12979103918256446 No Hit TCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 407 0.1121548894847213 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.266945170863979E-4 0.0 0.0 0.28934308098023925 0.0 2 8.266945170863979E-4 0.0 0.0 1.9705641638949436 0.0 3 8.266945170863979E-4 0.0 0.0 2.402374266653072 0.0 4 8.266945170863979E-4 0.0 0.0 3.537701403451725 0.0 5 8.266945170863979E-4 0.0 0.0 8.063302754821695 0.0 6 8.266945170863979E-4 0.0 0.0 9.177411399015131 0.0 7 8.266945170863979E-4 0.0 0.0 10.81399097800717 0.0 8 8.266945170863979E-4 0.0 0.0 12.926195469162916 0.0 9 8.266945170863979E-4 0.0 0.0 13.6302636328815 0.0 10 8.266945170863979E-4 0.0 0.0 18.294749663121983 0.0 11 8.266945170863979E-4 0.0 0.0 19.6105717694845 0.0 12 8.266945170863979E-4 0.0 0.0 25.21473390081319 0.0 13 8.266945170863979E-4 0.0 0.0 26.04997092790948 0.0 14 8.266945170863979E-4 0.0 0.0 26.440446304813292 0.0 15 8.266945170863979E-4 0.0 0.0 27.38838935107236 0.0 16 8.266945170863979E-4 0.0 0.0 28.255867464335022 0.0 17 8.266945170863979E-4 0.0 0.0 29.158617876993368 0.0 18 8.266945170863979E-4 0.0 0.0 30.366143001617566 0.0 19 8.266945170863979E-4 0.0 0.0 31.672595903453104 0.0 20 8.266945170863979E-4 0.0 0.0 32.442799628538594 0.0 21 8.266945170863979E-4 0.0 0.0 33.06640285926077 0.0 22 8.266945170863979E-4 0.0 0.0 33.77047102297935 0.0 23 8.266945170863979E-4 0.0 0.0 34.34915718493983 0.0 24 8.266945170863979E-4 0.0 0.0 34.828364440010915 0.0 25 8.266945170863979E-4 0.0 0.0 35.21746199271958 0.0 26 8.266945170863979E-4 0.0 0.0 35.638525066755584 0.0 27 8.266945170863979E-4 0.0 0.0 36.14308428701732 0.0 28 8.266945170863979E-4 0.0 0.0 36.545133387160334 0.0 29 8.266945170863979E-4 0.0 0.0 36.986863824123496 0.0 30 0.0011022593561151972 0.0 0.0 37.590350821596566 0.0 31 0.0013778241951439964 0.0 0.0 38.006453728530055 0.0 32 0.0013778241951439964 0.0 0.0 38.418698727717135 0.0 33 0.0013778241951439964 0.0 0.0 38.82047226302113 0.0 34 0.0013778241951439964 0.0 0.0 39.24346429093033 0.0 35 0.0013778241951439964 0.0 0.0 39.66535405948343 0.0 36 0.0013778241951439964 0.0 0.0 40.07374115092411 0.0 37 0.0013778241951439964 0.0 0.0 40.45429619362288 0.0 38 0.0013778241951439964 0.0 0.0 40.86984797087831 0.0 39 0.0016533890341727958 0.0 0.0 41.22918452097186 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGCAAG 25 3.8855105E-5 45.000004 1 CAACGTA 25 3.8855105E-5 45.000004 45 GCGGCTA 35 1.208864E-7 45.000004 24 CGATGTG 25 3.8855105E-5 45.000004 10 GCGAACC 40 6.7921064E-9 45.0 33 GACAATA 20 7.0268987E-4 45.0 21 TAGAACG 20 7.0268987E-4 45.0 1 TAGCGCA 20 7.0268987E-4 45.0 24 TGAACGT 20 7.0268987E-4 45.0 38 CATCTCG 20 7.0268987E-4 45.0 43 CGACAAT 20 7.0268987E-4 45.0 20 CCCGTAC 20 7.0268987E-4 45.0 31 ACGGCTA 20 7.0268987E-4 45.0 30 AAGTTAG 20 7.0268987E-4 45.0 1 AGCGCAT 20 7.0268987E-4 45.0 29 CGTAAGG 20 7.0268987E-4 45.0 2 ATGCGCG 20 7.0268987E-4 45.0 1 GTCCCAA 20 7.0268987E-4 45.0 44 ACTCCTA 20 7.0268987E-4 45.0 30 CCAACGA 20 7.0268987E-4 45.0 44 >>END_MODULE