##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935720.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 672853 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.065711232616934 33.0 31.0 34.0 30.0 34.0 2 32.114530216852714 33.0 31.0 34.0 30.0 34.0 3 32.14926885961718 34.0 31.0 34.0 30.0 34.0 4 35.79762741638961 37.0 35.0 37.0 35.0 37.0 5 34.91458461209209 37.0 35.0 37.0 33.0 37.0 6 35.35848840682883 37.0 35.0 37.0 33.0 37.0 7 35.898435468074005 37.0 35.0 37.0 35.0 37.0 8 35.869610449830795 37.0 35.0 37.0 35.0 37.0 9 37.67550118673767 39.0 38.0 39.0 35.0 39.0 10 37.37064708041727 39.0 37.0 39.0 34.0 39.0 11 37.30308551793631 39.0 37.0 39.0 34.0 39.0 12 37.15451814883786 39.0 37.0 39.0 34.0 39.0 13 37.05429714960028 39.0 37.0 39.0 33.0 39.0 14 38.05992096341994 40.0 37.0 41.0 33.0 41.0 15 38.18413234391464 40.0 37.0 41.0 33.0 41.0 16 38.23541100359217 40.0 37.0 41.0 33.0 41.0 17 38.2125843237676 40.0 37.0 41.0 34.0 41.0 18 38.21159896738218 40.0 37.0 41.0 34.0 41.0 19 38.121478242647356 40.0 37.0 41.0 34.0 41.0 20 38.08157799697705 40.0 36.0 41.0 34.0 41.0 21 38.00496542335399 40.0 36.0 41.0 33.0 41.0 22 38.07113292204984 40.0 36.0 41.0 34.0 41.0 23 38.070773259538115 40.0 36.0 41.0 34.0 41.0 24 38.04195567233853 40.0 36.0 41.0 34.0 41.0 25 37.88679399512226 40.0 36.0 41.0 34.0 41.0 26 37.901259264653646 40.0 36.0 41.0 34.0 41.0 27 37.88202772373758 40.0 36.0 41.0 34.0 41.0 28 37.7335554719976 40.0 36.0 41.0 33.0 41.0 29 37.68202861546281 40.0 36.0 41.0 33.0 41.0 30 37.55067005720417 40.0 36.0 41.0 33.0 41.0 31 37.45541299511186 40.0 35.0 41.0 33.0 41.0 32 37.38897649263658 40.0 35.0 41.0 33.0 41.0 33 37.250470756614 40.0 35.0 41.0 32.0 41.0 34 37.13341101250942 40.0 35.0 41.0 32.0 41.0 35 37.07246456506845 39.0 35.0 41.0 32.0 41.0 36 36.963757314004695 39.0 35.0 41.0 31.0 41.0 37 36.93939092193986 39.0 35.0 41.0 31.0 41.0 38 36.79017705204554 39.0 35.0 41.0 31.0 41.0 39 36.7473846441942 39.0 35.0 41.0 31.0 41.0 40 36.6191798208524 39.0 35.0 41.0 31.0 41.0 41 36.504998863050325 39.0 35.0 41.0 31.0 41.0 42 36.519698953560436 39.0 35.0 41.0 31.0 41.0 43 36.41288067378759 39.0 35.0 41.0 31.0 41.0 44 36.30295027294223 39.0 35.0 41.0 30.0 41.0 45 36.262910323651674 38.0 35.0 41.0 30.0 41.0 46 36.14122698420012 38.0 35.0 40.0 30.0 41.0 47 35.99335367457677 38.0 35.0 40.0 30.0 41.0 48 35.92790995953054 38.0 35.0 40.0 30.0 41.0 49 35.90202614835633 38.0 35.0 40.0 30.0 41.0 50 35.769184353789015 38.0 35.0 40.0 29.0 41.0 51 34.549915063171305 36.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 18.0 10 20.0 11 12.0 12 12.0 13 19.0 14 21.0 15 39.0 16 77.0 17 108.0 18 171.0 19 337.0 20 626.0 21 1084.0 22 1537.0 23 2193.0 24 3143.0 25 4169.0 26 5209.0 27 6106.0 28 7239.0 29 8370.0 30 10281.0 31 13238.0 32 17488.0 33 24916.0 34 45292.0 35 54171.0 36 49919.0 37 75489.0 38 128273.0 39 213102.0 40 168.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.98398015614109 18.233403135603172 21.25739203065157 17.52522467760417 2 29.490245269026072 26.965176643338147 25.85973459284569 17.684843494790094 3 31.58639405635406 25.565911127690594 26.38213696007895 16.465557855876394 4 28.181044002181753 25.32053806700721 27.854821186797118 18.643596744013923 5 26.040903436560438 30.26991036675173 24.437730083688415 19.25145611299942 6 25.283828711471894 34.913272289786924 24.479195307147325 15.323703691593854 7 77.98850566171214 6.310888113748471 10.807709856387651 4.892896368151736 8 78.74320245283887 6.5818239645212255 9.044769065457091 5.630204517182802 9 72.18173954786559 7.443676404801643 11.76423379252229 8.610350254810486 10 40.19154258062311 25.135059217986694 18.505973815974663 16.167424385415536 11 32.070749480198494 23.687046056122213 25.495613454944838 18.74659100873445 12 27.181865875607304 21.68571738552106 29.988719675768706 21.143697063102938 13 25.975064389993058 22.78803839768865 32.74221858266218 18.494678629656107 14 21.86019828996824 26.780738140425917 31.109321055267642 20.249742514338198 15 20.003329107546524 23.31222421539326 36.09317339745829 20.591273279601936 16 24.05250478187658 23.679615012491585 30.146555042483275 22.121325163148565 17 24.433717320127872 23.694625720625456 28.091574236868976 23.780082722377696 18 25.777398629418315 22.834705351689003 29.639460625129114 21.74843539376357 19 25.09359399452778 25.49546483407223 27.172948623250548 22.237992548149446 20 25.038901513406348 26.466256373977675 27.727453098968123 20.767389013647854 21 24.427921106095983 27.163734129148565 29.098926511437117 19.309418253318334 22 23.123921569793104 23.261098635214527 29.13608172959027 24.478898065402102 23 21.484336103130996 25.766995168335434 29.29956468946412 23.449104039069454 24 22.646848568706687 24.234862592572227 28.833489632951032 24.284799205770057 25 22.786254947217298 26.970675615624813 26.89889173415293 23.344177703004966 26 22.338014395417723 24.843910928538627 27.87800604292468 24.940068633118972 27 23.552098303789982 23.641865310847987 28.241829939080304 24.564206446281727 28 21.189323670995 25.396037470294402 29.469289725987696 23.9453491327229 29 23.853501433448315 24.693060742836845 27.607516054769764 23.845921768945075 30 25.49784276803403 23.763288563772473 28.859498285658237 21.879370382535264 31 26.492710889302717 23.515537569127286 27.426198590182405 22.5655529513876 32 27.164774475256852 24.472804609624983 25.90283464590334 22.45958626921482 33 25.57988148971618 23.95471224769749 26.94392385855454 23.521482404031786 34 24.977372472144733 24.029617167494237 29.204893193609898 21.788117166751135 35 24.145690069004672 25.459944445517817 27.392610272971957 23.001755212505554 36 25.29556976040829 26.910484162216708 27.26925494870351 20.524691128671492 37 24.465819428612193 26.408888717149214 27.32498777593323 21.800304078305366 38 22.748951108191537 27.280995997639902 27.53751562376923 22.43253727039933 39 23.734158872740405 25.088243643113728 26.766470536655106 24.41112694749076 40 24.995801460348694 24.35554274113365 28.80807546373428 21.840580334783375 41 22.904705782689533 25.662514694888777 26.59005756086396 24.842721961557725 42 23.22394341706138 25.747674454895797 27.9927413565816 23.035640771461225 43 22.91362303504629 24.76320979470999 28.45822192960424 23.864945240639486 44 23.18039750138589 23.810995863881114 28.55958136472602 24.44902527000697 45 22.255232569372506 23.47169441170657 27.691040985178038 26.58203203374288 46 24.45571320927454 24.2321874168652 27.67617889791678 23.635920475943482 47 21.818584445636713 24.618601685657936 30.31360490329983 23.24920896540552 48 22.42733553985789 25.497991388906645 28.2889427556985 23.785730315536973 49 23.585538000127816 23.350122537909467 29.986044500061677 23.07829496190104 50 22.21584803813017 23.51301101429287 29.73026797829541 24.54087296928155 51 22.01298054701398 23.51078170120368 27.224371445174505 27.25186630660783 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 302.0 1 811.5 2 1321.0 3 2204.0 4 3087.0 5 2192.0 6 1297.0 7 1280.0 8 1263.0 9 1345.5 10 1428.0 11 1382.5 12 1337.0 13 1429.5 14 1522.0 15 1466.0 16 1410.0 17 1378.5 18 1347.0 19 1495.0 20 1643.0 21 1845.5 22 2048.0 23 2388.0 24 2728.0 25 2987.5 26 4029.5 27 4812.0 28 5797.5 29 6783.0 30 7751.5 31 8720.0 32 10346.0 33 11972.0 34 14037.5 35 16103.0 36 17066.5 37 18030.0 38 19250.0 39 20470.0 40 22855.0 41 25240.0 42 28676.0 43 32112.0 44 36751.0 45 41390.0 46 53420.5 47 65451.0 48 65686.5 49 65922.0 50 65989.0 51 66056.0 52 58212.5 53 50369.0 54 46050.5 55 41732.0 56 40013.0 57 38294.0 58 35244.0 59 32194.0 60 28978.5 61 25763.0 62 23542.0 63 21321.0 64 18969.0 65 16617.0 66 14781.0 67 12945.0 68 11007.5 69 9070.0 70 7658.0 71 6246.0 72 5496.0 73 4746.0 74 3858.5 75 2351.5 76 1732.0 77 1332.5 78 933.0 79 719.5 80 506.0 81 353.0 82 200.0 83 147.0 84 94.0 85 65.5 86 37.0 87 31.0 88 25.0 89 16.5 90 8.0 91 6.0 92 4.0 93 3.0 94 2.0 95 2.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 672853.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.380247448441594 #Duplication Level Percentage of deduplicated Percentage of total 1 74.25143758810935 24.785313600936075 2 9.64567930329939 6.439503239048908 3 3.532791897534873 3.5377640317069083 4 1.8482967571329667 2.4678641244500232 5 1.2362227972747835 2.0632711437218463 6 0.9037363659499538 1.8100166114138894 7 0.7069359788618257 1.6518388533229813 8 0.6143665963581545 1.6406167208393627 9 0.5257025064730813 1.5793271775303679 >10 6.558988177866768 46.386490038196335 >50 0.13433617100482434 2.7313241745143118 >100 0.036150265278082475 2.079107678162369 >500 0.0026777974280061097 0.6043952314635089 >1k 0.0026777974280061097 2.223167374693109 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTC 3367 0.5004064780865954 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGC 3118 0.46339988080606015 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCG 2889 0.4293657009777767 No Hit CCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC 2142 0.3183459091361709 No Hit GCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC 1857 0.27598896044158233 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1550 0.23036235254951676 No Hit CTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGCT 968 0.14386500468898852 No Hit GAACTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCT 776 0.11532979714737099 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.4586261783777437E-4 0.0 0.0 0.15248501530051883 0.0 2 4.4586261783777437E-4 0.0 0.0 0.904358009847619 0.0 3 4.4586261783777437E-4 0.0 0.0 1.2449970498756786 0.0 4 4.4586261783777437E-4 0.0 0.0 1.7367835173507438 0.0 5 4.4586261783777437E-4 0.0 0.0 3.1760280477310796 0.0 6 4.4586261783777437E-4 0.0 0.0 4.246098330541738 0.0 7 4.4586261783777437E-4 0.0 0.0 5.173195333899083 0.0 8 4.4586261783777437E-4 0.0 0.0 6.719892755178323 0.0 9 4.4586261783777437E-4 0.0 0.0 7.4637402226043426 0.0 10 4.4586261783777437E-4 0.0 0.0 9.075830827833123 0.0 11 4.4586261783777437E-4 0.0 0.0 10.238046051663588 0.0 12 4.4586261783777437E-4 0.0 0.0 11.830072839089667 0.0 13 4.4586261783777437E-4 0.0 0.0 12.34296347047572 0.0 14 5.944834904503658E-4 0.0 0.0 12.60215827231208 0.0 15 5.944834904503658E-4 0.0 0.0 12.976237008677973 0.0 16 5.944834904503658E-4 0.0 0.0 13.56106014240852 0.0 17 5.944834904503658E-4 0.0 0.0 14.249323403477431 0.0 18 5.944834904503658E-4 0.0 0.0 15.09631375649659 0.0 19 7.431043630629573E-4 0.0 0.0 15.625255442124804 0.0 20 7.431043630629573E-4 0.0 0.0 16.121500535778246 0.0 21 7.431043630629573E-4 0.0 0.0 16.63632323850826 0.0 22 7.431043630629573E-4 0.0 0.0 17.207770493703677 0.0 23 7.431043630629573E-4 0.0 0.0 17.769706013051884 0.0 24 7.431043630629573E-4 0.0 0.0 18.211258625583895 0.0 25 7.431043630629573E-4 0.0 0.0 18.600199449211047 0.0 26 7.431043630629573E-4 0.0 0.0 18.99776028344973 0.0 27 7.431043630629573E-4 0.0 0.0 19.476022251517048 0.0 28 7.431043630629573E-4 0.0 0.0 19.90895485343753 0.0 29 7.431043630629573E-4 0.0 0.0 20.372354734243586 0.0 30 7.431043630629573E-4 0.0 0.0 21.026137952866378 0.0 31 7.431043630629573E-4 0.0 0.0 21.469176774124513 0.0 32 7.431043630629573E-4 0.0 0.0 21.90329834302589 0.0 33 8.917252356755487E-4 0.0 0.0 22.359415801073933 0.0 34 8.917252356755487E-4 0.0 0.0 22.806913248510448 0.0 35 8.917252356755487E-4 0.0 0.0 23.286661425303894 0.0 36 8.917252356755487E-4 0.0 0.0 23.74129267462581 0.0 37 8.917252356755487E-4 0.0 0.0 24.175117001781963 0.0 38 0.0010403461082881401 0.0 0.0 24.6819141773909 0.0 39 0.0010403461082881401 0.0 0.0 25.40629231050467 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTGTCG 25 3.889076E-5 45.0 28 CGTCTTA 20 7.0312E-4 45.0 10 TATTGCG 35 1.2109194E-7 45.0 1 ACGATTG 25 3.889076E-5 45.0 1 TTACGCG 20 7.0312E-4 45.0 1 GCGTAAG 45 3.8380676E-10 45.0 1 GCCGATT 30 2.1641554E-6 44.999996 9 CGTAAGG 115 0.0 41.086956 2 ACAACGG 75 0.0 39.0 2 CTTACGG 35 6.2444287E-6 38.571426 2 ACGGGTA 90 0.0 37.5 5 CTCACGA 30 1.13941904E-4 37.499996 24 CAACGTT 30 1.13941904E-4 37.499996 8 TACGCAG 30 1.13941904E-4 37.499996 44 CGGTCTA 30 1.13941904E-4 37.499996 31 ACGTAAG 30 1.13941904E-4 37.499996 1 TAATGCG 60 1.546141E-10 37.499996 1 GCGATGC 225 0.0 37.0 9 TAGCCGT 55 2.744855E-9 36.81818 44 TTGATCG 25 0.0021064894 36.0 1 >>END_MODULE