##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935718.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 612800 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.69774640992167 31.0 31.0 34.0 30.0 34.0 2 31.705680483028722 31.0 31.0 34.0 30.0 34.0 3 31.7571295691906 33.0 31.0 34.0 30.0 34.0 4 35.46192558746736 37.0 35.0 37.0 33.0 37.0 5 34.52836488250653 37.0 35.0 37.0 32.0 37.0 6 34.99137891644909 37.0 35.0 37.0 32.0 37.0 7 35.4935182767624 37.0 35.0 37.0 33.0 37.0 8 35.447016971279375 37.0 35.0 37.0 33.0 37.0 9 37.18293570496083 39.0 37.0 39.0 34.0 39.0 10 36.94413348563969 39.0 37.0 39.0 33.0 39.0 11 36.95549445169713 39.0 37.0 39.0 33.0 39.0 12 36.88905515665796 39.0 35.0 39.0 33.0 39.0 13 36.71304014360313 39.0 35.0 39.0 33.0 39.0 14 37.740515665796345 40.0 36.0 41.0 33.0 41.0 15 37.77753100522193 40.0 36.0 41.0 33.0 41.0 16 37.90702676240209 40.0 36.0 41.0 33.0 41.0 17 37.78116677545692 39.0 36.0 41.0 33.0 41.0 18 37.7505319843342 39.0 36.0 41.0 33.0 41.0 19 37.74467362924282 39.0 36.0 41.0 33.0 41.0 20 37.60887565274152 39.0 36.0 41.0 32.0 41.0 21 37.59935704960836 39.0 36.0 41.0 33.0 41.0 22 37.61315437336815 39.0 36.0 41.0 33.0 41.0 23 37.638971932114885 39.0 36.0 41.0 33.0 41.0 24 37.643798955613576 39.0 36.0 41.0 33.0 41.0 25 37.43743635770235 39.0 35.0 41.0 32.0 41.0 26 37.502731723237595 39.0 36.0 41.0 33.0 41.0 27 37.44395234986945 39.0 36.0 41.0 33.0 41.0 28 37.074317885117495 39.0 35.0 41.0 31.0 41.0 29 36.8380091383812 39.0 35.0 41.0 31.0 41.0 30 36.80479112271541 39.0 35.0 41.0 31.0 41.0 31 36.877291122715405 39.0 35.0 41.0 31.0 41.0 32 36.90803687989556 39.0 35.0 41.0 31.0 41.0 33 36.74480907310705 39.0 35.0 41.0 31.0 41.0 34 36.6314703002611 39.0 35.0 41.0 30.0 41.0 35 36.60264849869451 39.0 35.0 41.0 30.0 41.0 36 36.50585998694517 39.0 35.0 41.0 30.0 41.0 37 36.41138381201044 39.0 35.0 41.0 30.0 41.0 38 36.32943701044386 39.0 35.0 41.0 30.0 41.0 39 36.31125815926893 39.0 35.0 41.0 30.0 41.0 40 36.17921181462141 39.0 35.0 40.0 30.0 41.0 41 35.96224706266319 38.0 35.0 40.0 29.0 41.0 42 35.96340404699739 38.0 35.0 40.0 29.0 41.0 43 35.83190274151436 38.0 35.0 40.0 28.0 41.0 44 35.7889703002611 38.0 35.0 40.0 28.0 41.0 45 35.89404862924282 38.0 35.0 40.0 29.0 41.0 46 35.75306951697128 38.0 35.0 40.0 28.0 41.0 47 35.65513381201044 38.0 35.0 40.0 28.0 41.0 48 35.647007180156656 38.0 35.0 40.0 28.0 41.0 49 35.48596442558747 38.0 35.0 40.0 27.0 41.0 50 35.25002774151436 38.0 35.0 40.0 26.0 41.0 51 34.0896295691906 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 12.0 11 4.0 12 9.0 13 5.0 14 15.0 15 20.0 16 36.0 17 72.0 18 155.0 19 410.0 20 938.0 21 1710.0 22 2544.0 23 3476.0 24 4288.0 25 5181.0 26 6041.0 27 6754.0 28 7767.0 29 9181.0 30 11558.0 31 14889.0 32 19497.0 33 25855.0 34 41019.0 35 54700.0 36 48010.0 37 67196.0 38 111941.0 39 169409.0 40 100.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.23253916449086 16.574086161879894 19.87353133159269 17.319843342036553 2 25.283126631853786 33.159758485639685 24.08583550913838 17.471279373368144 3 27.015013054830288 32.21932114882507 25.864066579634464 14.901599216710181 4 25.31837467362924 22.94990208877285 34.48253916449086 17.24918407310705 5 28.887075718015666 27.705287206266316 24.38838120104439 19.01925587467363 6 22.109823759791123 37.23449738903394 25.12679503916449 15.528883812010443 7 70.06396866840731 5.745430809399478 18.35819190600522 5.83240861618799 8 68.57424934725849 11.60231723237598 11.825228459530027 7.998204960835508 9 61.65828981723238 8.154699738903394 14.742003916449086 15.445006527415146 10 37.36112924281984 26.149314621409918 20.593178851174933 15.896377284595301 11 28.2811684073107 25.518603133159267 27.00212140992167 19.198107049608353 12 23.863250652741513 17.72878590078329 35.34791122715405 23.060052219321147 13 25.49640992167102 22.22878590078329 36.12124673629243 16.153557441253263 14 17.578655352480418 33.41073759791123 28.53590078328982 20.474706266318538 15 13.535248041775457 23.691579634464752 43.86553524804177 18.907637075718014 16 15.344973890339425 27.281821148825063 30.068537859007833 27.30466710182768 17 16.728296344647518 24.52545691906005 29.111129242819842 29.635117493472585 18 20.985639686684074 22.359823759791123 31.382996083550914 25.271540469973893 19 21.849869451697128 25.0576044386423 26.929667101827675 26.1628590078329 20 21.010933420365536 24.224869451697128 31.03720626631854 23.7269908616188 21 21.777904699738905 30.242983028720626 28.660900783289815 19.318211488250654 22 16.864719321148826 25.464425587467364 28.449249347258487 29.221605744125327 23 16.42036553524804 28.1431135770235 27.854765013054834 27.58175587467363 24 19.901599216710185 22.332082245430808 27.911553524804177 29.85476501305483 25 16.3503590078329 31.18439947780679 25.57816579634465 26.88707571801567 26 15.716383812010443 23.368635770234985 29.114556135770236 31.800424281984334 27 20.383159268929504 25.617819843342037 26.74771540469974 27.25130548302872 28 17.74330939947781 23.260443864229767 34.23580287206266 24.760443864229764 29 17.91857049608355 20.617819843342037 32.206592689295036 29.257016971279377 30 19.008159268929504 24.18798955613577 31.942558746736292 24.861292428198432 31 20.07996083550914 24.593831592689295 30.010443864229764 25.315763707571804 32 23.108518276762403 25.2960182767624 29.321475195822455 22.27398825065274 33 20.909268929503916 20.335345953002612 29.861945169712794 28.89343994778068 34 21.468505221932116 19.045039164490863 32.92460835509139 26.56184725848564 35 21.056625326370757 20.11047650130548 31.6628590078329 27.170039164490863 36 23.805319843342037 18.819353785900784 32.5246409921671 24.85068537859008 37 19.48172323759791 20.952839425587467 39.27203002610966 20.29340731070496 38 20.66710182767624 21.393929503916446 29.853296344647518 28.08567232375979 39 24.65861618798956 18.944843342036556 32.89409268929504 23.50244778067885 40 25.597095300261095 17.50179503916449 30.404862924281982 26.496246736292427 41 21.963446475195823 20.16334856396867 28.9095953002611 28.963609660574413 42 25.827513054830288 19.363413838120106 31.377774151436032 23.431298955613578 43 26.104601827676237 19.75669060052219 28.932930809399476 25.20577676240209 44 20.548466057441253 18.72780678851175 32.20251305483029 28.521214099216714 45 18.786390339425587 18.574902088772845 29.941253263707573 32.697454308093995 46 25.222584856396868 22.3782637075718 28.574412532637076 23.824738903394255 47 18.27186684073107 18.315763707571804 37.13446475195823 26.2779046997389 48 21.178198433420363 19.995920365535248 29.8519908616188 28.97389033942559 49 22.411063968668408 15.761749347258485 37.37956919060052 24.447617493472585 50 22.43325718015666 16.39947780678851 34.40926892950392 26.75799608355091 51 21.404536553524807 17.22943864229765 28.27888381201044 33.0871409921671 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 306.0 1 484.5 2 663.0 3 1430.5 4 2198.0 5 1515.0 6 832.0 7 862.5 8 893.0 9 936.5 10 980.0 11 1047.0 12 1114.0 13 1120.5 14 1127.0 15 1126.5 16 1126.0 17 1192.0 18 1258.0 19 1248.0 20 1238.0 21 1239.0 22 1240.0 23 1322.5 24 1405.0 25 1853.5 26 2940.0 27 3578.0 28 3725.5 29 3873.0 30 5585.5 31 7298.0 32 7530.5 33 7763.0 34 8946.0 35 10129.0 36 11213.0 37 12297.0 38 13473.5 39 14650.0 40 17308.5 41 19967.0 42 24818.0 43 29669.0 44 38193.0 45 46717.0 46 80889.5 47 115062.0 48 96616.5 49 78171.0 50 75423.5 51 72676.0 52 57718.0 53 42760.0 54 36321.0 55 29882.0 56 27190.5 57 24499.0 58 23296.5 59 22094.0 60 19827.0 61 17560.0 62 15298.5 63 13037.0 64 10545.5 65 8054.0 66 6826.0 67 5598.0 68 4512.5 69 3427.0 70 3012.5 71 2598.0 72 2189.5 73 1781.0 74 1675.5 75 1128.0 76 686.0 77 484.0 78 282.0 79 250.5 80 219.0 81 155.0 82 91.0 83 81.0 84 71.0 85 57.5 86 44.0 87 26.0 88 8.0 89 6.0 90 4.0 91 3.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 612800.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.15673133214809 #Duplication Level Percentage of deduplicated Percentage of total 1 74.54283831442983 25.461397010417343 2 11.2259941463812 7.668865319884195 3 4.39652803380034 4.505130805343265 4 2.2418405484179202 3.062957812073057 5 1.2513462332540624 2.137094854637726 6 0.7868823989636324 1.6126398414838174 7 0.5774529477761486 1.3806733635902795 8 0.4405999732425603 1.2039563928798216 9 0.35179173036775246 1.0814450057138523 >10 3.7891210254743597 29.78165011750187 >50 0.3370321150734078 7.191339405261496 >100 0.04897047825833661 3.1451143240611765 >500 0.0028806163681374475 0.6108530610108912 >1k 0.004801027280229079 4.021626971337207 >5k 4.8010272802290796E-4 1.017213835557197 >10k+ 0.0014403081840687238 6.1180418792468005 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTC 14084 2.298302872062663 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGC 12437 2.0295365535248044 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCG 10787 1.7602806788511751 No Hit GCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 6203 1.012238903394256 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTT 3998 0.6524151436031331 No Hit CCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 3749 0.6117819843342037 No Hit GAACTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCT 3209 0.5236618798955613 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCT 2720 0.44386422976501305 No Hit CTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGCT 2287 0.37320496083550914 Illumina Single End Adapter 2 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTC 2226 0.36325065274151436 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTA 1965 0.3206592689295039 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTTCTGGT 1836 0.2996083550913838 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1285 0.20969321148825065 No Hit TCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 1249 0.20381853785900783 No Hit ACTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTGC 801 0.13071148825065274 No Hit GCCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATGCCGTCTTCTG 708 0.11553524804177545 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCTTTCTGGTCGTATG 674 0.10998694516971279 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.527415143603133E-4 0.0 0.0 0.39033942558746737 0.0 2 6.527415143603133E-4 0.0 0.0 2.452676240208877 0.0 3 6.527415143603133E-4 0.0 0.0 3.1533942558746735 0.0 4 6.527415143603133E-4 0.0 0.0 4.462140992167102 0.0 5 6.527415143603133E-4 0.0 0.0 8.693864229765014 0.0 6 6.527415143603133E-4 0.0 0.0 10.760280678851174 0.0 7 6.527415143603133E-4 0.0 0.0 12.549934725848564 0.0 8 6.527415143603133E-4 0.0 0.0 15.158126631853786 0.0 9 6.527415143603133E-4 0.0 0.0 16.087304177545693 0.0 10 6.527415143603133E-4 0.0 0.0 19.72911227154047 0.0 11 6.527415143603133E-4 0.0 0.0 21.72584856396867 0.0 12 6.527415143603133E-4 0.0 0.0 25.89947780678851 0.0 13 6.527415143603133E-4 0.0 0.0 27.010280678851174 0.0 14 6.527415143603133E-4 0.0 0.0 27.52023498694517 0.0 15 6.527415143603133E-4 0.0 0.0 28.37385770234987 0.0 16 6.527415143603133E-4 0.0 0.0 29.49804177545692 0.0 17 6.527415143603133E-4 0.0 0.0 30.818048302872064 0.0 18 6.527415143603133E-4 0.0 0.0 32.69810704960835 0.0 19 6.527415143603133E-4 0.0 0.0 33.878263707571804 0.0 20 6.527415143603133E-4 0.0 0.0 34.86798302872063 0.0 21 6.527415143603133E-4 0.0 0.0 35.7894908616188 0.0 22 6.527415143603133E-4 0.0 0.0 36.670691906005224 0.0 23 6.527415143603133E-4 0.0 0.0 37.44125326370757 0.0 24 6.527415143603133E-4 0.0 0.0 38.0509138381201 0.0 25 6.527415143603133E-4 0.0 0.0 38.585998694516974 0.0 26 6.527415143603133E-4 0.0 0.0 39.162206266318535 0.0 27 6.527415143603133E-4 0.0 0.0 39.775456919060055 0.0 28 6.527415143603133E-4 0.0 0.0 40.27447780678851 0.0 29 8.159268929503916E-4 0.0 0.0 40.81168407310705 0.0 30 9.791122715404699E-4 0.0 0.0 41.53296344647519 0.0 31 9.791122715404699E-4 0.0 0.0 42.115372062663184 0.0 32 9.791122715404699E-4 0.0 0.0 42.630711488250654 0.0 33 9.791122715404699E-4 0.0 0.0 43.23368146214099 0.0 34 9.791122715404699E-4 0.0 0.0 43.89817232375979 0.0 35 9.791122715404699E-4 0.0 0.0 44.496899477806785 0.0 36 9.791122715404699E-4 0.0 0.0 45.00179503916449 0.0 37 9.791122715404699E-4 0.0 0.0 45.491840731070496 0.0 38 9.791122715404699E-4 0.0 0.0 45.972095300261095 0.0 39 9.791122715404699E-4 0.0 0.0 46.599706266318535 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 25 3.888666E-5 45.000004 1 ACCGAAC 25 3.888666E-5 45.000004 24 ATTCGGG 25 3.888666E-5 45.000004 3 CACGAAG 25 3.888666E-5 45.000004 1 TTATCGG 25 3.888666E-5 45.000004 2 TCAGGCG 35 1.210683E-7 45.000004 1 CTAACGG 25 3.888666E-5 45.000004 2 TGCGACG 25 3.888666E-5 45.000004 1 CGGTCGA 25 3.888666E-5 45.000004 41 CTCTATA 25 3.888666E-5 45.000004 32 ATGTTAG 35 1.210683E-7 45.000004 1 CGAAGTA 25 3.888666E-5 45.000004 23 AAGTCCG 50 2.1827873E-11 45.000004 11 TCGTTTA 20 7.0307066E-4 45.0 38 TTGGCCG 20 7.0307066E-4 45.0 1 GTCGACG 20 7.0307066E-4 45.0 1 CTGAGCG 45 3.8380676E-10 45.0 1 CGCATCG 20 7.0307066E-4 45.0 21 CCGCTAT 20 7.0307066E-4 45.0 29 GCCGCAT 20 7.0307066E-4 45.0 19 >>END_MODULE