SRR2935715.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935715.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	665223
Sequences flagged as poor quality	0
Sequence length	51
%GC	35

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	45793	6.883856992316863	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	979	0.14716869380643785	No Hit
GCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCGTCTTCTGC	869	0.13063288551357966	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	847	0.127325723855008	No Hit
CCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCGTCTTCTGC	746	0.1121428453315655	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	733	0.11018861344240954	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTAGCG	20	7.03114E-4	45.000004	1
GGTATCG	20	7.03114E-4	45.000004	3
GCGATAC	25	3.8890274E-5	45.0	9
CGGTCTA	25	3.8890274E-5	45.0	31
CGTTTTT	25980	0.0	44.428406	1
CCATACG	60	3.6379788E-12	41.249996	2
CTAACGG	50	1.0804797E-9	40.5	2
GCTAACG	50	1.0804797E-9	40.5	1
GTTTTTT	28920	0.0	40.16857	2
CTAACAC	85	0.0	39.705883	28
AGGGCGA	240	0.0	39.374996	6
TTTAGCG	35	6.2443214E-6	38.571426	1
CGAACCC	60	1.546141E-10	37.499996	19
TTCACGG	30	1.1394051E-4	37.499996	2
TACGGGT	30	1.1394051E-4	37.499996	4
TAACGGG	120	0.0	37.499996	3
TATGCCA	30	1.1394051E-4	37.499996	10
CGTTTAC	30	1.1394051E-4	37.499996	33
GCATATC	60	1.546141E-10	37.499996	28
GACCGAT	165	0.0	36.818184	9