##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935715.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 665223 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.437472847451154 34.0 31.0 34.0 31.0 34.0 2 32.64675605022676 34.0 31.0 34.0 31.0 34.0 3 32.47707911482315 34.0 31.0 34.0 31.0 34.0 4 36.08445739248342 37.0 35.0 37.0 35.0 37.0 5 36.11615202721494 37.0 35.0 37.0 35.0 37.0 6 36.114683346787466 37.0 36.0 37.0 35.0 37.0 7 36.262158704674974 37.0 37.0 37.0 35.0 37.0 8 36.048057568664944 37.0 37.0 37.0 35.0 37.0 9 37.86117136659436 39.0 38.0 39.0 35.0 39.0 10 37.7161327855471 39.0 38.0 39.0 35.0 39.0 11 37.66251317227456 39.0 38.0 39.0 35.0 39.0 12 37.5028945180789 39.0 37.0 39.0 35.0 39.0 13 37.46521392074538 39.0 37.0 39.0 35.0 39.0 14 38.72781909224425 41.0 38.0 41.0 35.0 41.0 15 38.86006196418344 41.0 38.0 41.0 35.0 41.0 16 38.94044403155032 41.0 38.0 41.0 35.0 41.0 17 38.91196035013822 41.0 38.0 41.0 35.0 41.0 18 38.2299168850145 39.0 38.0 40.0 35.0 41.0 19 37.517152894593245 37.0 37.0 40.0 35.0 41.0 20 36.67120198790481 35.0 35.0 40.0 34.0 41.0 21 36.63136722572731 35.0 35.0 40.0 33.0 41.0 22 36.636914237781916 35.0 35.0 40.0 34.0 41.0 23 36.65387697057979 35.0 35.0 40.0 34.0 41.0 24 36.490195017309986 35.0 35.0 40.0 33.0 41.0 25 36.41026242327761 35.0 35.0 40.0 33.0 41.0 26 36.26056976382356 35.0 35.0 40.0 33.0 41.0 27 36.1766595562691 35.0 35.0 40.0 33.0 41.0 28 36.00154384319244 35.0 35.0 40.0 33.0 41.0 29 35.733439763808526 35.0 35.0 40.0 33.0 41.0 30 35.16661029459294 35.0 35.0 40.0 30.0 41.0 31 34.42444714028228 35.0 35.0 40.0 23.0 41.0 32 33.32197172978084 35.0 33.0 40.0 16.0 41.0 33 32.08771043695122 35.0 31.0 40.0 10.0 41.0 34 31.02465639341995 35.0 25.0 40.0 7.0 41.0 35 30.406036772631133 35.0 23.0 40.0 7.0 41.0 36 30.039541627394122 35.0 21.0 40.0 7.0 41.0 37 29.84197780293225 35.0 21.0 40.0 7.0 41.0 38 29.682649277009364 35.0 20.0 40.0 7.0 41.0 39 29.529240570455322 35.0 18.0 40.0 7.0 41.0 40 29.383626242628413 35.0 18.0 40.0 7.0 41.0 41 29.194044703806092 35.0 18.0 40.0 7.0 41.0 42 29.107350467437236 35.0 18.0 40.0 7.0 41.0 43 29.00910070758227 35.0 18.0 40.0 7.0 41.0 44 28.892117380186793 35.0 18.0 40.0 7.0 41.0 45 28.857339568836316 35.0 18.0 40.0 7.0 41.0 46 28.860167192054394 35.0 18.0 40.0 7.0 41.0 47 28.894199388776396 35.0 19.0 39.0 7.0 41.0 48 28.855982129301 35.0 20.0 39.0 7.0 41.0 49 28.861508095781414 35.0 20.0 39.0 7.0 41.0 50 28.731592263045624 35.0 19.0 39.0 7.0 41.0 51 28.09223974516816 34.0 18.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 4.0 9 8.0 10 10.0 11 19.0 12 3.0 13 22.0 14 30.0 15 50.0 16 103.0 17 199.0 18 455.0 19 767.0 20 1311.0 21 2070.0 22 3214.0 23 5653.0 24 10788.0 25 22246.0 26 37575.0 27 43914.0 28 39752.0 29 30521.0 30 23718.0 31 20265.0 32 19164.0 33 22161.0 34 38670.0 35 46095.0 36 43944.0 37 43632.0 38 76041.0 39 132692.0 40 124.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.71303156986454 12.940773244460878 14.105796101457708 47.240399084216875 2 60.37584388994367 14.448237658649807 14.361048851287464 10.814869600119058 3 20.334233783257645 15.045330663551923 53.99392384208003 10.626511711110409 4 17.916397959781907 15.695789231580989 54.60529777232597 11.782515036311132 5 16.211556124788228 17.91053526411444 53.63359354682565 12.24431506427168 6 16.48710282115922 20.749282571408383 53.273413577101216 9.490201030331182 7 48.9613257509136 3.75753694625712 43.99577284609823 3.285364456731051 8 49.53166081148728 3.4299776165285927 43.66114821646275 3.3772133555213815 9 46.084997061135894 4.3170485686754665 44.96432023546991 4.633634134718734 10 27.97888828257592 13.965241730968412 48.87819573285951 9.177674253596162 11 21.0064895531273 14.850809427815935 52.35236905518901 11.790331963867756 12 19.003101215682562 13.453984603659224 55.073411472543796 12.469502708114423 13 17.47624480813201 13.243679187280055 56.62251605852473 12.657559946063198 14 13.760799010256711 15.106813805295365 57.40631337160621 13.726073812841708 15 13.58010772327475 14.58939333125884 58.81290935520871 13.017589590257703 16 16.96994842331068 14.634040013649557 55.84909120700878 12.546920356030986 17 16.42847586448454 15.370484784801489 54.95495495495496 13.246084395759016 18 16.896890215762234 14.673725953552418 55.86231985364306 12.567063977042285 19 16.7068787459243 16.24823555409239 54.289163182872514 12.755722517110804 20 16.561664284007016 16.890426217975023 54.62889888052578 11.919010617492178 21 16.39375066706954 15.944577983623537 56.03970397896645 11.621967370340473 22 15.097192971379522 14.620059739365596 56.68745668745668 13.595290601798194 23 14.764672899163136 14.971220177293931 56.61965987345597 13.644447050086963 24 15.632652509008258 15.255485754401155 55.5512963322074 13.560565404383192 25 15.6276917665204 15.449856664607205 54.38822770709972 14.534223861772668 26 14.243644612408172 15.257289660760376 54.934210031823916 15.564855695007541 27 14.551811948775073 14.936194328819058 55.92064615925787 14.591347563147997 28 13.214666360002585 16.628859795887998 54.650545756836436 15.505928087272991 29 15.555084535561758 16.731081156243846 53.823454691133655 13.890379617060745 30 17.074274341085623 15.670534542551895 53.70785435861358 13.547336757748903 31 16.765054726009172 17.219939779592707 52.015339217074576 13.999666277323545 32 18.1773630797492 18.362714458159143 49.00612275883425 14.453799703257403 33 18.35820469226109 20.3764752571694 45.943841388526856 15.321478662042654 34 16.94469373428159 22.37400089894667 45.298042911925776 15.383262454845969 35 17.852960586149305 24.350180315473157 41.737282084353666 16.05957701402387 36 19.638226579658248 26.073512190648852 38.96918777612921 15.319073453563693 37 19.09344685917354 26.1213157091682 38.93145606811551 15.853781363542751 38 19.19070747704153 25.94934330292248 37.92472599414031 16.935223225895676 39 19.239713599800368 24.676537040962206 38.28761182340358 17.796137535833846 40 19.975256417772684 23.45439048259005 39.138454322836104 17.431898776801162 41 17.971717754798014 24.6186617119372 38.18734469493689 19.2222758383279 42 18.601281074166106 24.585439769821548 38.536851552035934 18.276427603976412 43 18.899226274497423 24.081999570068984 38.65034732713691 18.368426828296677 44 18.62503250789585 23.626513214365712 38.72370618574523 19.02474809199321 45 18.706358619590723 22.66052135900292 38.88034538793758 19.752774633468775 46 18.53619011970422 22.92795047675742 39.876853325877185 18.659006077661175 47 16.814962801947615 23.2373204173638 41.91301262884777 18.03470415184081 48 17.002118086716784 23.164412535345292 41.61416547533684 18.219303902601084 49 18.239898500202187 21.83628647836891 42.01778952321252 17.906025498216387 50 16.924850764330156 21.935801979185925 42.08303080320434 19.056316453279575 51 16.85870753115872 21.528570118591812 41.425506935268324 20.18721541498114 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 126.0 1 392.0 2 658.0 3 42159.5 4 83661.0 5 54803.5 6 25946.0 7 24672.5 8 23399.0 9 22762.0 10 22125.0 11 21449.5 12 20774.0 13 19675.5 14 18577.0 15 16989.5 16 15402.0 17 14099.5 18 12797.0 19 11547.5 20 10298.0 21 9225.0 22 8152.0 23 7586.5 24 7021.0 25 6652.5 26 6180.5 27 6077.0 28 6263.5 29 6450.0 30 6849.0 31 7248.0 32 7779.0 33 8310.0 34 9171.0 35 10032.0 36 10890.5 37 11749.0 38 12551.5 39 13354.0 40 14875.0 41 16396.0 42 17680.0 43 18964.0 44 21138.5 45 23313.0 46 27639.0 47 31965.0 48 34349.0 49 36733.0 50 37387.0 51 38041.0 52 34542.0 53 31043.0 54 29433.0 55 27823.0 56 26427.0 57 25031.0 58 24033.0 59 23035.0 60 21235.5 61 19436.0 62 17903.0 63 16370.0 64 14373.0 65 12376.0 66 10503.0 67 8630.0 68 7463.5 69 6297.0 70 5429.0 71 4561.0 72 3801.0 73 3041.0 74 2382.0 75 1340.5 76 958.0 77 707.0 78 456.0 79 368.5 80 281.0 81 244.0 82 207.0 83 138.0 84 69.0 85 47.0 86 25.0 87 14.5 88 4.0 89 3.5 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 665223.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.59412489187585 #Duplication Level Percentage of deduplicated Percentage of total 1 80.47408466385615 35.886713820593926 2 7.22304618463918 6.442108473151739 3 2.752844799010053 3.6828211432501554 4 1.6041198465278006 2.861372831103899 5 1.1251229626356463 2.508693695724569 6 0.9150756578139627 2.448419890204278 7 0.7787527661250101 2.430945867873074 8 0.6696660382243321 2.3890536755538863 9 0.6087747297177808 2.443299869524741 >10 3.7390457084914805 25.40593405323098 >50 0.06100308375552756 1.9104617976021212 >100 0.04473559311048302 3.5951320280282437 >500 0.0033890600841274834 1.0742474548185923 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 3.3890600841274835E-4 6.920795399339871 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 45793 6.883856992316863 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 979 0.14716869380643785 No Hit GCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCGTCTTCTGC 869 0.13063288551357966 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 847 0.127325723855008 No Hit CCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCGTCTTCTGC 746 0.1121428453315655 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 733 0.11018861344240954 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.006510598701488E-4 0.0 0.0 0.07501243943760212 0.0 2 3.006510598701488E-4 0.0 0.0 0.39385288842989497 0.0 3 3.006510598701488E-4 0.0 0.0 0.5858185901569849 0.0 4 3.006510598701488E-4 0.0 0.0 0.8243852061639481 0.0 5 3.006510598701488E-4 0.0 0.0 1.5283596628499014 0.0 6 3.006510598701488E-4 0.0 0.0 1.9507744019674604 0.0 7 3.006510598701488E-4 0.0 0.0 2.351842915834239 0.0 8 3.006510598701488E-4 0.0 0.0 2.9537463376942767 0.0 9 3.006510598701488E-4 0.0 0.0 3.226887825586307 0.0 10 3.006510598701488E-4 0.0 0.0 3.773922429020043 0.0 11 3.006510598701488E-4 0.0 0.0 4.48541316220275 0.0 12 4.5097658980522323E-4 0.0 0.0 5.103702066825711 0.0 13 4.5097658980522323E-4 0.0 0.0 5.3349027318658555 0.0 14 4.5097658980522323E-4 0.0 0.0 5.463280734430409 0.0 15 4.5097658980522323E-4 0.0 0.0 5.651337972379187 0.0 16 4.5097658980522323E-4 0.0 0.0 5.999341574178884 0.0 17 4.5097658980522323E-4 0.0 0.0 6.381168420213974 0.0 18 4.5097658980522323E-4 0.0 0.0 6.787348002098544 0.0 19 6.013021197402976E-4 0.0 0.0 7.094914036345707 0.0 20 6.013021197402976E-4 0.0 0.0 7.37466984755488 0.0 21 6.013021197402976E-4 0.0 0.0 7.712601638848927 0.0 22 6.013021197402976E-4 0.0 0.0 8.10134345926103 0.0 23 6.013021197402976E-4 0.0 0.0 8.429053114519492 0.0 24 6.013021197402976E-4 0.0 0.0 8.706704368309575 0.0 25 6.013021197402976E-4 0.0 0.0 8.964061675558423 0.0 26 7.51627649675372E-4 0.0 0.0 9.20428187239467 0.0 27 7.51627649675372E-4 0.0 0.0 9.49516177281904 0.0 28 7.51627649675372E-4 0.0 0.0 9.748911267349445 0.0 29 7.51627649675372E-4 0.0 0.0 10.029268380678358 0.0 30 7.51627649675372E-4 0.0 0.0 10.352468270038768 0.0 31 7.51627649675372E-4 0.0 0.0 10.604113207150084 0.0 32 7.51627649675372E-4 0.0 0.0 10.861320188868996 0.0 33 7.51627649675372E-4 0.0 0.0 11.136115257590312 0.0 34 7.51627649675372E-4 0.0 0.0 11.413766511380395 0.0 35 7.51627649675372E-4 0.0 0.0 11.70750259687353 0.0 36 7.51627649675372E-4 0.0 0.0 11.963055997763156 0.0 37 7.51627649675372E-4 0.0 0.0 12.255138502427005 0.0 38 9.019531796104465E-4 0.0 0.0 12.599383965978326 0.0 39 9.019531796104465E-4 0.0 0.0 13.143261733283426 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAGCG 20 7.03114E-4 45.000004 1 GGTATCG 20 7.03114E-4 45.000004 3 GCGATAC 25 3.8890274E-5 45.0 9 CGGTCTA 25 3.8890274E-5 45.0 31 CGTTTTT 25980 0.0 44.428406 1 CCATACG 60 3.6379788E-12 41.249996 2 CTAACGG 50 1.0804797E-9 40.5 2 GCTAACG 50 1.0804797E-9 40.5 1 GTTTTTT 28920 0.0 40.16857 2 CTAACAC 85 0.0 39.705883 28 AGGGCGA 240 0.0 39.374996 6 TTTAGCG 35 6.2443214E-6 38.571426 1 CGAACCC 60 1.546141E-10 37.499996 19 TTCACGG 30 1.1394051E-4 37.499996 2 TACGGGT 30 1.1394051E-4 37.499996 4 TAACGGG 120 0.0 37.499996 3 TATGCCA 30 1.1394051E-4 37.499996 10 CGTTTAC 30 1.1394051E-4 37.499996 33 GCATATC 60 1.546141E-10 37.499996 28 GACCGAT 165 0.0 36.818184 9 >>END_MODULE