##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935711.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 213061 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30736737366294 33.0 31.0 34.0 30.0 34.0 2 32.49915751826941 34.0 31.0 34.0 30.0 34.0 3 32.37800911476056 34.0 31.0 34.0 30.0 34.0 4 36.02054341244995 37.0 35.0 37.0 35.0 37.0 5 36.03805013587658 37.0 35.0 37.0 35.0 37.0 6 36.04568644660449 37.0 35.0 37.0 35.0 37.0 7 36.169308320152446 37.0 36.0 37.0 35.0 37.0 8 35.73557338039341 37.0 35.0 37.0 35.0 37.0 9 37.642614087045494 39.0 38.0 39.0 35.0 39.0 10 37.58661603953797 39.0 37.0 39.0 35.0 39.0 11 37.57731353931503 39.0 37.0 39.0 35.0 39.0 12 37.44784826880565 39.0 37.0 39.0 35.0 39.0 13 37.36212164591361 39.0 37.0 39.0 34.0 39.0 14 38.7350664833076 40.0 38.0 41.0 35.0 41.0 15 38.76914592534532 40.0 38.0 41.0 35.0 41.0 16 38.920468785934546 41.0 38.0 41.0 35.0 41.0 17 38.797034652048005 41.0 38.0 41.0 35.0 41.0 18 38.24417420363182 39.0 38.0 40.0 35.0 41.0 19 37.62062977269421 37.0 37.0 40.0 35.0 41.0 20 36.70846846677712 36.0 35.0 40.0 34.0 41.0 21 36.818408812499705 36.0 35.0 40.0 33.0 41.0 22 36.75958997657948 36.0 35.0 40.0 33.0 41.0 23 36.685085491948314 36.0 35.0 40.0 33.0 41.0 24 36.587282515335986 36.0 35.0 40.0 33.0 41.0 25 36.61247717789741 36.0 35.0 40.0 33.0 41.0 26 36.415768254161954 35.0 35.0 40.0 33.0 41.0 27 36.233393253575265 35.0 35.0 40.0 33.0 41.0 28 36.111634696166824 35.0 35.0 40.0 33.0 41.0 29 35.890773064990775 35.0 35.0 40.0 32.0 41.0 30 35.44369922228845 35.0 35.0 40.0 30.0 41.0 31 34.85619611285031 35.0 35.0 40.0 25.0 41.0 32 33.78575619188871 35.0 34.0 40.0 18.0 41.0 33 32.72348294619851 35.0 33.0 40.0 12.0 41.0 34 31.767916230563078 35.0 30.0 40.0 8.0 41.0 35 31.295215924078082 35.0 27.0 40.0 7.0 41.0 36 30.79957852446013 35.0 24.0 40.0 7.0 41.0 37 30.627472883352656 35.0 23.0 40.0 7.0 41.0 38 30.491845058457436 35.0 23.0 40.0 7.0 41.0 39 30.384509600536937 35.0 23.0 40.0 7.0 41.0 40 30.3302387579144 35.0 23.0 40.0 7.0 41.0 41 30.097244451119632 35.0 22.0 40.0 7.0 41.0 42 29.984835328849485 35.0 21.0 40.0 7.0 41.0 43 29.740158921623387 35.0 21.0 40.0 7.0 41.0 44 29.79802497876195 35.0 21.0 40.0 7.0 41.0 45 29.777138941429918 35.0 20.0 40.0 7.0 41.0 46 29.778110494177724 35.0 20.0 40.0 7.0 41.0 47 29.706149881958687 35.0 20.0 40.0 7.0 41.0 48 29.72908697509164 35.0 21.0 40.0 7.0 41.0 49 29.743519461562652 35.0 20.0 40.0 7.0 41.0 50 29.54142710303622 35.0 20.0 40.0 7.0 41.0 51 28.958786450828637 35.0 20.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 2.0 10 1.0 11 5.0 12 5.0 13 1.0 14 7.0 15 9.0 16 22.0 17 45.0 18 98.0 19 207.0 20 416.0 21 805.0 22 1308.0 23 2103.0 24 3458.0 25 6148.0 26 10053.0 27 12697.0 28 11429.0 29 8878.0 30 7133.0 31 6446.0 32 6276.0 33 6830.0 34 10732.0 35 16489.0 36 14948.0 37 14755.0 38 26698.0 39 45013.0 40 41.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.141968731959395 12.230300242653511 13.138490854731744 42.48924017065535 2 53.72780565190251 21.67829870318829 13.32482246868268 11.269073176226527 3 18.807759280206138 22.11995625665889 49.39805971059931 9.674224752535658 4 17.740928654235173 14.627266369725103 56.49743500687596 11.134369969163762 5 20.889322776106372 17.25984577186815 48.48939974936755 13.361431702657924 6 15.269336011752502 25.64054425727843 49.70407535870009 9.386044372268975 7 46.49748194179132 3.8402147741726544 45.899531120195626 3.7627721638404026 8 45.02231755225029 9.339109456916095 41.070397679537784 4.568175311295826 9 41.66318566044466 4.939430491737109 41.486241029564304 11.911142818253927 10 28.40172532748837 14.903713021153568 46.28768287016394 10.406878781194118 11 23.00233266529304 14.900896926232393 49.32859603587705 12.768174372597517 12 18.79555620221439 12.957322081469627 52.29629073363966 15.950830982676322 13 17.461196558732006 15.941913348759277 55.05653310554255 11.540356986966174 14 13.149285885262907 22.13168998549711 50.818310249177465 13.900713880062519 15 10.798785324390668 15.962564711514544 59.293817263600566 13.944832700494224 16 12.173039645923 15.940505301298687 53.510966342972196 18.375488709806113 17 12.012991584569676 17.54896485044189 53.498763264980454 16.93928030000798 18 12.723116853858754 17.05145474770136 53.55086102102214 16.674567377417734 19 14.139143250055147 17.494520348632552 51.242132534813976 17.124203866498327 20 16.885305147352167 17.225113934507018 53.68931902131314 12.20026189682767 21 14.823454315900142 20.95690905421452 51.77672122068328 12.44291540920206 22 12.379553273475672 15.57582100900681 53.809941753770055 18.23468396374747 23 14.137265853441033 19.470949634142336 51.762640746077416 14.629143766339217 24 14.85959420072186 17.05239344600842 51.40593538939553 16.682076963874195 25 12.311966995367523 21.329572282116388 50.9670939308461 15.391366791669991 26 12.629247023152992 16.564739675491996 54.38583316514989 16.420180136205122 27 17.1237345173448 18.18399425516636 50.316106654901645 14.376164572587195 28 11.394389400218717 18.838266975185512 55.05465570892842 14.712687915667344 29 14.423099487940075 16.021702704859173 54.41915695505043 15.136040852150323 30 16.474624638014465 19.579838637761014 50.65028325221416 13.295253472010362 31 17.269702104092254 17.217604348050557 48.40210080681119 17.11059274104599 32 19.929034407986446 21.35679453302106 45.464444454874425 13.24972660411807 33 20.116774069397966 18.792270758139686 43.97332219411342 17.117632978348922 34 18.617672873026976 20.162770286443788 44.11365759101854 17.105899249510703 35 21.696133971022384 20.133670638925004 40.193653460745985 17.97654192930663 36 19.51131366134581 22.754046963076302 43.38241160982066 14.352227765757226 37 19.868488367181232 24.404747936037097 40.90518677749564 14.821576919286025 38 19.284618020191402 23.87109794847485 38.37868028405011 18.46560374728364 39 21.040922552696177 24.817775191142445 38.17216665649744 15.969135599663947 40 21.48633489939501 21.993231985206116 39.01652578369575 17.50390733170313 41 19.087022026555776 23.463233534058322 37.86051881855431 19.589225620831595 42 19.9266876622188 22.66158517983113 40.047216524845 17.364510633105073 43 19.787290963620745 22.5991617424118 39.061583302434514 18.55196399153294 44 19.012864860298222 22.655483640835254 39.20332674680021 19.12832475206631 45 17.77612984074983 21.665626276043014 38.84005050196892 21.718193381238237 46 21.471785075635616 23.829325873810784 38.2857491516514 16.413139898902195 47 16.652038618048355 21.754333266059955 44.25117689300247 17.342451222889217 48 17.86342878330619 21.62995574037482 40.17628754206542 20.33032793425357 49 17.364510633105073 19.095470311319293 45.371982671629254 18.168036383946383 50 17.891589732517918 19.284618020191402 42.61408704549402 20.20970520179667 51 17.245765297262285 19.596735207288056 39.56613364247797 23.591365852971684 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 110.0 1 163.5 2 217.0 3 12204.0 4 24191.0 5 15925.5 6 7660.0 7 7206.5 8 6753.0 9 6552.5 10 6352.0 11 6145.0 12 5938.0 13 5582.5 14 5227.0 15 4783.5 16 4340.0 17 3918.5 18 3497.0 19 3232.5 20 2968.0 21 2617.0 22 2266.0 23 2136.5 24 2007.0 25 1989.5 26 1888.5 27 1805.0 28 1961.0 29 2117.0 30 2225.0 31 2333.0 32 2334.5 33 2336.0 34 2479.0 35 2622.0 36 2965.0 37 3308.0 38 3545.0 39 3782.0 40 4669.5 41 5557.0 42 6474.0 43 7391.0 44 8272.0 45 9153.0 46 15858.0 47 22563.0 48 19297.0 49 16031.0 50 15469.5 51 14908.0 52 12451.5 53 9995.0 54 9049.5 55 8104.0 56 7247.5 57 6391.0 58 5813.5 59 5236.0 60 4948.5 61 4661.0 62 4270.5 63 3880.0 64 3315.0 65 2750.0 66 2139.5 67 1529.0 68 1331.0 69 1133.0 70 884.0 71 635.0 72 618.5 73 602.0 74 474.0 75 295.5 76 245.0 77 158.5 78 72.0 79 65.0 80 58.0 81 37.0 82 16.0 83 9.0 84 2.0 85 1.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 213061.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.10427060794796 #Duplication Level Percentage of deduplicated Percentage of total 1 81.09482914578211 35.7662828955088 2 7.808958273473167 6.888168177188693 3 2.630654790409603 3.4806933225695924 4 1.3706647937085636 2.4180868389803862 5 0.9971373538081708 2.1989007842824355 6 0.8013280975640903 2.1205194756431256 7 0.7108727346252487 2.1946766419006765 8 0.5374112739307644 1.8961705802563584 9 0.4927156828315721 1.9557779227545165 >10 3.4617799487064884 24.331529468086604 >50 0.058529940725132755 1.8281149529946823 >100 0.02660451851142398 2.446717137345643 >500 0.0031925422213708774 0.9668592562693314 >1k 0.004256722961827837 4.485100511121228 >5k 0.0 0.0 >10k+ 0.0010641807404569593 7.0224020350979295 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14962 7.0224020350979295 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGC 2997 1.4066394131258184 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCG 2861 1.3428079282459013 No Hit GAATCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTC 2541 1.192616199116685 No Hit GCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 1157 0.5430369706328234 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGTAGGGTT 736 0.34544097699719795 No Hit CCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 713 0.3346459464660355 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCT 611 0.28677233280609776 No Hit CTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGCT 477 0.22387954623323839 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTA 449 0.2107377699344319 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTC 405 0.19008640717916467 No Hit GAACTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCT 381 0.17882202749447343 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 292 0.13704995283041005 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 263 0.12343882737807482 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGAGCACCGATCGAATGC 240 0.11264379684691238 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 235 0.11029705107926838 No Hit CGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTG 233 0.10935835277221077 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2304504343826416 0.0 2 0.0 0.0 0.0 1.322625914644163 0.0 3 0.0 0.0 0.0 1.7497336443553724 0.0 4 4.6934915352880163E-4 0.0 0.0 2.358010147328699 0.0 5 4.6934915352880163E-4 0.0 0.0 4.739487752333838 0.0 6 4.6934915352880163E-4 0.0 0.0 5.346356207846579 0.0 7 4.6934915352880163E-4 0.0 0.0 6.211366697800161 0.0 8 4.6934915352880163E-4 0.0 0.0 7.3068276221363835 0.0 9 4.6934915352880163E-4 0.0 0.0 7.633025283838901 0.0 10 4.6934915352880163E-4 0.0 0.0 9.76809458324142 0.0 11 4.6934915352880163E-4 0.0 0.0 10.841965446515317 0.0 12 4.6934915352880163E-4 0.0 0.0 13.241278319354551 0.0 13 4.6934915352880163E-4 0.0 0.0 13.713443567804525 0.0 14 9.386983070576033E-4 0.0 0.0 13.904468673290747 0.0 15 9.386983070576033E-4 0.0 0.0 14.406202918413037 0.0 16 9.386983070576033E-4 0.0 0.0 15.040293624830447 0.0 17 9.386983070576033E-4 0.0 0.0 15.70536137538076 0.0 18 9.386983070576033E-4 0.0 0.0 16.396712678528683 0.0 19 0.001408047460586405 0.0 0.0 17.186157954764127 0.0 20 0.0018773966141152065 0.0 0.0 17.66301669474939 0.0 21 0.0018773966141152065 0.0 0.0 18.115938627904686 0.0 22 0.0018773966141152065 0.0 0.0 18.662261042612208 0.0 23 0.002346745767644008 0.0 0.0 19.16305658942744 0.0 24 0.002346745767644008 0.0 0.0 19.529148929179907 0.0 25 0.002346745767644008 0.0 0.0 19.85957073326418 0.0 26 0.00281609492117281 0.0 0.0 20.186237744120227 0.0 27 0.00281609492117281 0.0 0.0 20.563125114403856 0.0 28 0.00281609492117281 0.0 0.0 20.878058396421682 0.0 29 0.00281609492117281 0.0 0.0 21.20801085135243 0.0 30 0.00281609492117281 0.0 0.0 21.577388635179595 0.0 31 0.00281609492117281 0.0 0.0 21.90968783587799 0.0 32 0.0032854440747016114 0.0 0.0 22.2537207654146 0.0 33 0.0032854440747016114 0.0 0.0 22.571939491507127 0.0 34 0.0032854440747016114 0.0 0.0 22.90329999389846 0.0 35 0.0032854440747016114 0.0 0.0 23.25484250989153 0.0 36 0.0032854440747016114 0.0 0.0 23.57869342582641 0.0 37 0.0032854440747016114 0.0 0.0 23.893157358690704 0.0 38 0.0032854440747016114 0.0 0.0 24.213253481397345 0.0 39 0.0032854440747016114 0.0 0.0 24.51739173288401 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGAT 45 3.8198777E-10 45.000004 31 CGGGCTC 45 3.8198777E-10 45.000004 6 GTACTGG 30 2.1571523E-6 45.000004 2 ACCCGTC 30 2.1571523E-6 45.000004 39 TGATCCG 35 1.205699E-7 45.0 4 TCGTTCA 25 3.8800776E-5 45.0 16 AGATACA 20 7.0203404E-4 45.0 21 TCATTAC 20 7.0203404E-4 45.0 29 CGCGACC 20 7.0203404E-4 45.0 10 CCGTCTA 20 7.0203404E-4 45.0 41 ATCCGGC 35 1.205699E-7 45.0 6 AACGGGA 20 7.0203404E-4 45.0 4 CCCGTCT 25 3.8800776E-5 45.0 40 CCCGTAG 20 7.0203404E-4 45.0 41 TAATTGC 20 7.0203404E-4 45.0 30 TGCGAGA 20 7.0203404E-4 45.0 12 CGAGCAC 55 1.8189894E-12 45.0 34 CGTAAGC 25 3.8800776E-5 45.0 43 TAGATAC 25 3.8800776E-5 45.0 20 CCGGTCC 20 7.0203404E-4 45.0 36 >>END_MODULE