SRR2935707.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935707.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	352957
Sequences flagged as poor quality	0
Sequence length	51
%GC	33

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27744	7.860447589933052	No Hit
GCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC	876	0.2481888728655332	No Hit
CCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC	814	0.23062299373578085	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	556	0.15752627090552107	No Hit
CTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGCT	524	0.14846001070951986	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	474	0.13429397915326796	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	437	0.12381111580164156	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA	380	0.10766183982751441	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGGGTA	35	1.2087366E-7	45.000004	5
GGAATGC	20	7.0266373E-4	45.0	8
CGTGAGT	20	7.0266373E-4	45.0	32
GACGTCG	20	7.0266373E-4	45.0	9
TTGTCGC	20	7.0266373E-4	45.0	38
CCTCGTG	55	1.8189894E-12	45.0	15
TAGCCGT	20	7.0266373E-4	45.0	44
TTGAGCG	20	7.0266373E-4	45.0	1
AATGCGG	20	7.0266373E-4	45.0	2
TCGTGAG	20	7.0266373E-4	45.0	31
CGTCGGC	20	7.0266373E-4	45.0	11
AACTCTC	45	3.8380676E-10	45.0	27
TAAGCCG	20	7.0266373E-4	45.0	17
GCGTCGG	20	7.0266373E-4	45.0	2
AAGTGCG	20	7.0266373E-4	45.0	12
CGATAGT	20	7.0266373E-4	45.0	10
TGCGTCG	20	7.0266373E-4	45.0	1
GCATATC	75	0.0	45.0	28
CACAACG	30	2.1612123E-6	44.999996	12
CGTTTTT	13950	0.0	44.499996	1