##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935705.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 375950 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.44132198430643 34.0 31.0 34.0 31.0 34.0 2 32.64629605000665 34.0 31.0 34.0 31.0 34.0 3 32.48145232078734 34.0 31.0 34.0 31.0 34.0 4 36.08608591568028 37.0 35.0 37.0 35.0 37.0 5 36.11273839606331 37.0 35.0 37.0 35.0 37.0 6 36.11935895730815 37.0 36.0 37.0 35.0 37.0 7 36.24497140577204 37.0 37.0 37.0 35.0 37.0 8 36.00073148025003 37.0 37.0 37.0 35.0 37.0 9 37.81785077802899 39.0 38.0 39.0 35.0 39.0 10 37.70704082989759 39.0 38.0 39.0 35.0 39.0 11 37.69186061976327 39.0 38.0 39.0 35.0 39.0 12 37.6021944407501 39.0 37.0 39.0 35.0 39.0 13 37.58178747173827 39.0 37.0 39.0 35.0 39.0 14 38.98428780422928 41.0 39.0 41.0 35.0 41.0 15 39.09156536773507 41.0 39.0 41.0 35.0 41.0 16 39.124043090836544 41.0 39.0 41.0 35.0 41.0 17 39.062053464556456 41.0 39.0 41.0 35.0 41.0 18 38.38398989227291 39.0 38.0 40.0 35.0 41.0 19 37.68272642638649 37.0 37.0 40.0 35.0 41.0 20 36.84658066232212 35.0 35.0 40.0 34.0 41.0 21 36.790833887485036 35.0 35.0 40.0 34.0 41.0 22 36.76946402447134 35.0 35.0 40.0 34.0 41.0 23 36.789652879372255 35.0 35.0 40.0 34.0 41.0 24 36.628144700093095 35.0 35.0 40.0 34.0 41.0 25 36.53082324777231 35.0 35.0 40.0 33.0 41.0 26 36.36200558584918 35.0 35.0 40.0 33.0 41.0 27 36.28093363479186 35.0 35.0 40.0 33.0 41.0 28 36.1106476925123 35.0 35.0 40.0 33.0 41.0 29 35.825793323580264 35.0 35.0 40.0 33.0 41.0 30 35.28788934698763 35.0 35.0 40.0 30.0 41.0 31 34.5926213592233 35.0 35.0 40.0 23.0 41.0 32 33.529527862747706 35.0 33.0 40.0 17.0 41.0 33 32.314318393403376 35.0 32.0 40.0 12.0 41.0 34 31.29082324777231 35.0 27.0 40.0 8.0 41.0 35 30.68533847586115 35.0 23.0 40.0 7.0 41.0 36 30.323383428647425 35.0 22.0 40.0 7.0 41.0 37 30.102830163585583 35.0 21.0 40.0 7.0 41.0 38 29.915039233940682 35.0 21.0 40.0 7.0 41.0 39 29.806016757547546 35.0 20.0 40.0 7.0 41.0 40 29.685998138050273 35.0 20.0 40.0 7.0 41.0 41 29.48426652480383 35.0 18.0 40.0 7.0 41.0 42 29.34132730416279 35.0 18.0 40.0 7.0 41.0 43 29.19949195371725 35.0 18.0 40.0 7.0 41.0 44 29.081170368400052 35.0 18.0 40.0 7.0 41.0 45 29.051791461630536 35.0 18.0 40.0 7.0 41.0 46 28.999521212927252 35.0 18.0 40.0 7.0 41.0 47 29.032025535310545 35.0 20.0 40.0 7.0 41.0 48 28.967458438622156 35.0 20.0 40.0 7.0 41.0 49 28.915696236201622 35.0 20.0 39.0 7.0 41.0 50 28.790969543822317 35.0 18.0 39.0 7.0 41.0 51 28.144420800638382 34.0 18.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 11.0 10 11.0 11 6.0 12 9.0 13 6.0 14 21.0 15 24.0 16 63.0 17 118.0 18 226.0 19 451.0 20 676.0 21 1141.0 22 1704.0 23 2973.0 24 5651.0 25 11704.0 26 20192.0 27 24893.0 28 22712.0 29 17771.0 30 13769.0 31 11557.0 32 10531.0 33 11332.0 34 18279.0 35 25925.0 36 25510.0 37 24812.0 38 44509.0 39 79277.0 40 85.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.30642372655938 12.494214656204282 13.85503391408432 47.34432770315202 2 60.325841202287535 14.555127011570686 14.187258944008512 10.931772842133263 3 20.49049075674957 14.921133129405506 53.5940949594361 10.99428115440883 4 18.310413618832293 15.858757813539034 53.59010506716319 12.240723500465487 5 16.413352839473333 18.084851709003857 52.63253092166511 12.869264529857693 6 16.281952387285543 21.36986301369863 52.90650352440485 9.441681074610987 7 48.374251895198825 4.2117302832823516 43.88695305226759 3.52706476925123 8 48.249235270647695 4.333023008378774 43.799175422263595 3.6185662987099345 9 44.50565234738662 5.562175821252826 45.21292725096423 4.719244580396329 10 25.59861683734539 15.803431307354701 49.368799042425856 9.229152812874053 11 20.194972735736137 15.675222768985236 52.500066498204546 11.629737997074079 12 19.5153610852507 13.465886421066632 54.90730150285942 12.111450990823249 13 16.565500731480252 14.419736667109989 55.42119962761005 13.593562973799708 14 12.730682271578667 17.108126080595824 55.72788934698764 14.433302300837877 15 12.972203750498737 16.011703684000533 58.48703285011305 12.529059715387683 16 14.65327836148424 15.39992020215454 57.14456709668839 12.80223433967283 17 13.901848650086448 15.3012368666046 55.52706476925123 15.26984971405772 18 14.748769783215854 16.20747439819125 55.233940683601546 13.809815134991354 19 16.21226226891874 16.703816996941082 54.154275834552465 12.92964489958771 20 17.907700492086715 15.546482244979384 54.423194573746514 12.122622689187391 21 16.485436893203882 16.438622157201756 54.474265194839745 12.601675754754622 22 14.69690118366804 16.091767522276896 54.68759143503126 14.523739859023808 23 15.349115573879505 16.30828567628674 54.829897592765 13.51270115706876 24 15.832158531719642 14.631998936028728 55.11184998005054 14.42399255220109 25 14.674025801303364 16.020747439819125 54.06064636254821 15.2445803963293 26 13.999202021545418 16.977789599680808 54.55539300438888 14.467615374384893 27 14.839207341401783 16.596621891208937 54.499002526931775 14.065168240457506 28 13.605266657800238 17.752892671897857 54.47320122356696 14.168639446734938 29 15.097220375049874 16.818991887219045 54.30668971937757 13.777098018353504 30 15.660859156802767 16.990291262135923 52.91341933767788 14.43543024338343 31 15.992286208272377 18.910493416677753 50.471871259475996 14.62534911557388 32 16.821651815400983 20.080063838276367 49.08950658332225 14.0087777630004 33 17.465354435430243 21.490623753158662 46.130602473733205 14.913419337677883 34 17.104136188322915 22.69397526266791 44.50059848384094 15.70129006516824 35 17.615108392073413 23.439021146429045 42.559116903843595 16.386753557653943 36 18.466019417475728 26.290730150285942 39.56031387152547 15.682936560712859 37 19.312142572150552 25.97872057454449 39.69464024471339 15.014496608591568 38 17.56909163452587 26.331959037106 39.501263465886424 16.59768586248171 39 18.984173427317465 24.742119962761006 39.34219976060646 16.931506849315067 40 19.087644633594895 24.256151083920734 39.998138050272644 16.65806623221173 41 17.602872722436494 25.4714722702487 39.31560047878707 17.61005452852773 42 18.06942412554861 25.793589573081526 38.43809017156537 17.698896129804496 43 18.565766724298445 25.23793057587445 38.37611384492619 17.820188854900916 44 17.448596887884026 25.72549541162389 38.30668971937758 18.51921798111451 45 18.25269317728421 24.096821385822583 38.65567229684799 18.99481314004522 46 17.736933102806223 25.057587445138978 39.463492485702886 17.74198696635191 47 17.097220375049872 24.126346588642107 41.422795584519214 17.3536374517888 48 17.257614044420798 22.845059183402046 41.83082856762867 18.066498204548477 49 17.17861417741721 22.668971937757682 42.17183136055326 17.980582524271846 50 15.913552334086981 22.507248304295786 42.60513366139114 18.974065700226095 51 16.03457906636521 22.56151083920734 41.39832424524538 20.005585849182072 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 86.0 1 264.0 2 442.0 3 24320.0 4 48198.0 5 32189.0 6 16180.0 7 15306.0 8 14432.0 9 13742.5 10 13053.0 11 12408.0 12 11763.0 13 10965.0 14 10167.0 15 9265.0 16 8363.0 17 7684.5 18 7006.0 19 6369.0 20 5732.0 21 5137.5 22 4543.0 23 4169.0 24 3795.0 25 3527.0 26 3278.0 27 3297.0 28 3364.0 29 3431.0 30 3567.0 31 3703.0 32 4271.0 33 4839.0 34 5600.0 35 6361.0 36 6586.5 37 6812.0 38 7205.0 39 7598.0 40 8545.5 41 9493.0 42 10653.0 43 11813.0 44 13182.0 45 14551.0 46 16622.5 47 18694.0 48 19852.0 49 21010.0 50 20998.0 51 20986.0 52 18666.5 53 16347.0 54 14695.5 55 13044.0 56 12584.0 57 12124.0 58 12018.0 59 11912.0 60 11979.5 61 12047.0 62 11587.0 63 11127.0 64 9238.0 65 7349.0 66 5966.5 67 4584.0 68 3762.0 69 2940.0 70 2416.0 71 1892.0 72 1572.5 73 1253.0 74 1004.5 75 620.0 76 484.0 77 375.0 78 266.0 79 188.0 80 110.0 81 86.0 82 62.0 83 47.5 84 33.0 85 19.0 86 5.0 87 4.0 88 3.0 89 4.0 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 375950.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.367775195291614 #Duplication Level Percentage of deduplicated Percentage of total 1 80.22897164150416 36.39809949581187 2 7.192642734196017 6.52628397250105 3 2.647605192071895 3.603478714794138 4 1.632924789865241 2.963286591097002 5 1.247000379111281 2.8286816433982 6 1.0478711069097975 2.8523748487155043 7 0.9202755477728508 2.922559791835778 8 0.7473529828835567 2.7124593695193453 9 0.6746462629024383 2.7546479992531285 >10 3.5443975692869625 23.738432765873156 >50 0.08383895774824532 2.717689688556903 >100 0.030111174965919092 2.5438496917233304 >500 0.0017712455862305349 0.4580375879590286 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 5.904151954101782E-4 6.980117838961594 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26059 6.931506849315068 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 605 0.1609256550073148 No Hit CCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGCCGTCTTCTGC 566 0.15055193509775236 TruSeq Adapter, Index 15 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGCCGTCTTCTGC 539 0.14337012900651683 TruSeq Adapter, Index 15 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 496 0.13193243782417874 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 465 0.12368666046016757 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 462 0.12288868200558585 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA 386 0.10267322782284878 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.979784545817263E-4 0.0 0.0 0.08139380236733608 0.0 2 7.979784545817263E-4 0.0 0.0 0.4689453384758612 0.0 3 7.979784545817263E-4 0.0 0.0 0.6772177151216917 0.0 4 7.979784545817263E-4 0.0 0.0 0.903577603404708 0.0 5 7.979784545817263E-4 0.0 0.0 1.6156403777098018 0.0 6 7.979784545817263E-4 0.0 0.0 2.0130336480915014 0.0 7 7.979784545817263E-4 0.0 0.0 2.3803697300172897 0.0 8 7.979784545817263E-4 0.0 0.0 2.938156669769916 0.0 9 7.979784545817263E-4 0.0 0.0 3.143503125415614 0.0 10 7.979784545817263E-4 0.0 0.0 3.6435696236201625 0.0 11 7.979784545817263E-4 0.0 0.0 4.32796914483309 0.0 12 7.979784545817263E-4 0.0 0.0 4.961830030589174 0.0 13 7.979784545817263E-4 0.0 0.0 5.230216784146828 0.0 14 7.979784545817263E-4 0.0 0.0 5.373852905971539 0.0 15 7.979784545817263E-4 0.0 0.0 5.59170102407235 0.0 16 7.979784545817263E-4 0.0 0.0 5.980848517090038 0.0 17 7.979784545817263E-4 0.0 0.0 6.408564968745844 0.0 18 7.979784545817263E-4 0.0 0.0 6.903045617768321 0.0 19 7.979784545817263E-4 0.0 0.0 7.209735337145897 0.0 20 7.979784545817263E-4 0.0 0.0 7.5052533581593295 0.0 21 7.979784545817263E-4 0.0 0.0 7.8768453251762205 0.0 22 7.979784545817263E-4 0.0 0.0 8.262268918739194 0.0 23 7.979784545817263E-4 0.0 0.0 8.626679079664848 0.0 24 7.979784545817263E-4 0.0 0.0 8.936028727224365 0.0 25 7.979784545817263E-4 0.0 0.0 9.21744912887352 0.0 26 7.979784545817263E-4 0.0 0.0 9.465886421066632 0.0 27 7.979784545817263E-4 0.0 0.0 9.720441548078202 0.0 28 7.979784545817263E-4 0.0 0.0 9.991488229817795 0.0 29 7.979784545817263E-4 0.0 0.0 10.24976725628408 0.0 30 7.979784545817263E-4 0.0 0.0 10.54235935629738 0.0 31 0.0010639712727756351 0.0 0.0 10.819789865673627 0.0 32 0.0010639712727756351 0.0 0.0 11.113445936959701 0.0 33 0.0010639712727756351 0.0 0.0 11.402846123154674 0.0 34 0.0010639712727756351 0.0 0.0 11.67602074743982 0.0 35 0.0010639712727756351 0.0 0.0 11.962229019816466 0.0 36 0.0010639712727756351 0.0 0.0 12.257747040829898 0.0 37 0.0010639712727756351 0.0 0.0 12.545019284479318 0.0 38 0.0010639712727756351 0.0 0.0 12.842665248038303 0.0 39 0.0010639712727756351 0.0 0.0 13.15148290996143 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAGAC 25 3.8857816E-5 45.0 21 AAGTACG 25 3.8857816E-5 45.0 1 ACGGGCC 25 3.8857816E-5 45.0 5 CGATGGT 20 7.0272246E-4 45.0 10 CCACGAG 25 3.8857816E-5 45.0 40 AATACGG 35 1.2090095E-7 45.0 2 CTCGATC 30 2.1615906E-6 44.999996 16 AGTACGG 30 2.1615906E-6 44.999996 2 CGTTTTT 14520 0.0 44.58161 1 TACGAAT 95 0.0 42.63158 12 GTTTTTT 16045 0.0 40.51262 2 GCTACGA 100 0.0 40.5 10 CGCGGGA 75 0.0 39.0 4 CGAATAT 110 0.0 38.863636 14 AGCTACG 105 0.0 38.57143 9 CTAGGGA 105 0.0 38.57143 4 CGTCTTT 35 6.237078E-6 38.571426 1 TCGATCA 35 6.237078E-6 38.571426 17 CACGAGC 30 1.1384613E-4 37.499996 41 GTAGACG 30 1.1384613E-4 37.499996 1 >>END_MODULE