##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935704.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 524029 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.36341118525883 33.0 31.0 34.0 30.0 34.0 2 32.57174889175981 34.0 31.0 34.0 31.0 34.0 3 32.432474156964595 34.0 31.0 34.0 30.0 34.0 4 36.03939285802885 37.0 35.0 37.0 35.0 37.0 5 36.06817370794364 37.0 35.0 37.0 35.0 37.0 6 36.07646714208565 37.0 36.0 37.0 35.0 37.0 7 36.236326615511736 37.0 37.0 37.0 35.0 37.0 8 36.03097538495007 37.0 37.0 37.0 35.0 37.0 9 37.836946046879085 39.0 38.0 39.0 35.0 39.0 10 37.659034137423696 39.0 38.0 39.0 35.0 39.0 11 37.6379417932977 39.0 37.0 39.0 35.0 39.0 12 37.5539960574701 39.0 37.0 39.0 35.0 39.0 13 37.54143759219433 39.0 37.0 39.0 35.0 39.0 14 38.8147259025741 41.0 38.0 41.0 35.0 41.0 15 38.95094737123327 41.0 39.0 41.0 35.0 41.0 16 39.03770402019735 41.0 39.0 41.0 35.0 41.0 17 39.01069978951546 41.0 38.0 41.0 35.0 41.0 18 38.38062206480939 39.0 38.0 40.0 35.0 41.0 19 37.69981241496177 37.0 37.0 40.0 35.0 41.0 20 36.90001698379288 36.0 35.0 40.0 34.0 41.0 21 36.86407622478909 36.0 35.0 40.0 34.0 41.0 22 36.86906068175616 36.0 35.0 40.0 34.0 41.0 23 36.874663425115784 36.0 35.0 40.0 34.0 41.0 24 36.71815872785666 36.0 35.0 40.0 34.0 41.0 25 36.62015270147263 35.0 35.0 40.0 33.0 41.0 26 36.47642592299281 35.0 35.0 40.0 33.0 41.0 27 36.39092302143584 35.0 35.0 40.0 33.0 41.0 28 36.26857292249093 35.0 35.0 40.0 33.0 41.0 29 36.04257016310166 35.0 35.0 40.0 33.0 41.0 30 35.529329483673614 35.0 35.0 40.0 31.0 41.0 31 34.890853368802105 35.0 35.0 40.0 25.0 41.0 32 33.90676661024485 35.0 34.0 40.0 18.0 41.0 33 32.78410355152101 35.0 33.0 40.0 12.0 41.0 34 31.809439935576084 35.0 31.0 40.0 8.0 41.0 35 31.21703760669734 35.0 26.0 40.0 7.0 41.0 36 30.848172524803015 35.0 23.0 40.0 7.0 41.0 37 30.676382413950375 35.0 23.0 40.0 7.0 41.0 38 30.499552505681937 35.0 23.0 40.0 7.0 41.0 39 30.355669247312647 35.0 22.0 40.0 7.0 41.0 40 30.21583347486494 35.0 22.0 40.0 7.0 41.0 41 30.03470800280137 35.0 21.0 40.0 7.0 41.0 42 29.955828780468256 35.0 21.0 40.0 7.0 41.0 43 29.874152003038 35.0 21.0 40.0 7.0 41.0 44 29.774002965484733 35.0 20.0 40.0 7.0 41.0 45 29.717775161298324 35.0 20.0 40.0 7.0 41.0 46 29.70284278160178 35.0 20.0 40.0 7.0 41.0 47 29.71631722671837 35.0 20.0 40.0 7.0 41.0 48 29.682191252774178 35.0 20.0 40.0 7.0 41.0 49 29.66644784926025 35.0 20.0 40.0 7.0 41.0 50 29.55395407506073 35.0 20.0 40.0 7.0 41.0 51 28.912821618650877 35.0 20.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 6.0 10 7.0 11 14.0 12 11.0 13 13.0 14 13.0 15 29.0 16 72.0 17 143.0 18 277.0 19 541.0 20 925.0 21 1464.0 22 2367.0 23 4124.0 24 7882.0 25 16128.0 26 26876.0 27 31896.0 28 28843.0 29 22543.0 30 16932.0 31 14285.0 32 14305.0 33 16852.0 34 26771.0 35 34339.0 36 36544.0 37 37341.0 38 66034.0 39 116335.0 40 112.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.878665112045326 13.34449047667209 14.95337090122875 44.82347351005384 2 58.01701814212572 14.851277314805097 15.575855534712774 11.555849008356407 3 20.719463999129818 15.45162576880287 52.57132715937477 11.257583072692542 4 18.63351074081778 16.12677924313349 52.524764850800246 12.714945165248487 5 16.5351535888281 18.78044917361444 51.840069919794516 12.84432731776295 6 16.455959498424704 21.35110843102195 51.98357342818814 10.209358642365213 7 51.245827998068805 3.8536035219424876 41.46163666514639 3.438931814842308 8 51.62214304933506 3.2221499191838623 41.39293817708562 3.762768854395463 9 47.8866627610304 4.47761478849453 42.80755454373708 4.828167906737986 10 26.46800081674869 15.593030156727966 47.23307297878552 10.705896047737816 11 18.669195788782684 16.174868184776034 51.41757421822075 13.738361808220537 12 17.494642472076926 14.469428218667288 54.299094134103264 13.736835175152521 13 16.61778260363453 14.773991515736725 55.75435710619069 12.853868774438057 14 13.527877273967661 16.609386121760437 56.05834791585962 13.804388688412283 15 12.736127199067226 16.379055357623336 57.33613979379004 13.548677649519398 16 15.44609172393131 16.082697713294493 54.40252352446143 14.068687038312767 17 16.06189733774276 15.740159418658129 53.08217674976004 15.11576649383908 18 16.495461129059652 15.219005055063747 54.28783521522664 13.997698600649963 19 15.957704630850584 16.674077198017667 53.02378303490838 14.344435136223376 20 15.86362586803402 17.635474372601518 52.96996921926077 13.530930540103697 21 15.728328012380993 16.849449171706148 54.41263746853705 13.009585347375813 22 15.267857313240299 14.769793274799678 54.53648557617995 15.425863835780081 23 14.308559259124973 16.17391403910852 54.73361207108767 14.783914630678838 24 15.346669745376687 16.121054369128426 54.05769528022304 14.474580605271845 25 15.364989342192894 16.455196181890695 52.88657688792032 15.293237587996083 26 14.257226222212893 16.697740010571934 52.59403582626152 16.45099794095365 27 13.993500359712915 16.02048741577279 54.27848458768503 15.70752763682926 28 12.69910634716781 16.283640790872262 54.04739050701393 16.969862354946006 29 14.310467550459993 16.58381501787115 52.7163573008364 16.389360130832454 30 15.20965442752214 15.751227508401252 52.78467413063017 16.25444393344643 31 15.487310816767774 16.988372780895713 51.34658578055795 16.177730621778565 32 16.553473185644304 18.04690198443216 48.64997929503902 16.749645534884518 33 16.71529629085413 18.652975312435 47.046060427953414 17.585667968757456 34 15.879273856981197 19.939545330506515 46.425865744071416 17.75531506844087 35 16.95974841087039 22.01862874001248 42.16312455990031 18.85849828921682 36 18.19861114556637 22.38444818893611 41.36202385745827 18.054916808039252 37 17.587385430958975 23.312831923424085 41.32214056855632 17.77764207706062 38 18.044612034830134 23.74296079033794 40.17373084314036 18.03869633169157 39 18.288491667445886 22.336168418160064 40.767781935732565 18.607557978661486 40 18.480084117482047 22.385974822004126 40.75881296645797 18.375128094055864 41 16.896965625948184 23.124865226924467 39.12359812147801 20.854571025649342 42 17.352856425884827 23.413208047646215 39.58559545368672 19.64834007278223 43 17.928587921660824 22.73652794024758 39.99396979938133 19.340914338710263 44 17.812372979358013 22.842247280207776 39.68062836217079 19.664751378263418 45 18.033543945087008 21.94477786534715 39.497241564875225 20.52443662469062 46 18.14021743071471 21.78734383020787 40.36436914750901 19.708069591568407 47 16.187462907587175 21.778947348333773 42.484480820717934 19.54910892336111 48 16.289365664877327 21.993630123523698 41.69711981588805 20.019884395710925 49 17.649404899347175 20.858960095719894 42.297277440752325 19.19435756418061 50 16.244902476771323 20.85228107604732 42.742100150945845 20.160716296235513 51 16.140518940745647 20.824420022556005 41.44503453053171 21.590026506166645 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 92.0 1 284.5 2 477.0 3 31105.5 4 61734.0 5 40382.5 6 19031.0 7 18253.5 8 17476.0 9 16950.0 10 16424.0 11 16013.0 12 15602.0 13 14460.0 14 13318.0 15 12416.0 16 11514.0 17 10392.0 18 9270.0 19 8427.5 20 7585.0 21 6982.0 22 6379.0 23 5779.0 24 5179.0 25 4925.5 26 4496.0 27 4320.0 28 4684.0 29 5048.0 30 5224.5 31 5401.0 32 6019.5 33 6638.0 34 7495.0 35 8352.0 36 8892.5 37 9433.0 38 10324.0 39 11215.0 40 12859.5 41 14504.0 42 16000.0 43 17496.0 44 19046.5 45 20597.0 46 24207.0 47 27817.0 48 31133.5 49 34450.0 50 34710.0 51 34970.0 52 30938.5 53 26907.0 54 24257.5 55 21608.0 56 20210.0 57 18812.0 58 17571.5 59 16331.0 60 14588.0 61 12845.0 62 11652.0 63 10459.0 64 9534.5 65 8610.0 66 7737.0 67 6864.0 68 6036.5 69 5209.0 70 4172.0 71 3135.0 72 2503.5 73 1872.0 74 1516.0 75 875.0 76 590.0 77 439.5 78 289.0 79 242.5 80 196.0 81 146.5 82 97.0 83 59.0 84 21.0 85 17.5 86 14.0 87 12.0 88 10.0 89 5.0 90 0.0 91 0.0 92 0.0 93 2.0 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 524029.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.551359736667 #Duplication Level Percentage of deduplicated Percentage of total 1 80.39526477547932 36.62113626912451 2 7.673433300905412 6.990706414097252 3 2.8186615736160525 3.8518160194711415 4 1.5461781210168137 2.817220632296029 5 1.0264231940630721 2.337748607741288 6 0.8283251671027694 2.2638802599379835 7 0.6631360573424996 2.1144724371654267 8 0.6341384013685702 2.310869315485974 9 0.5695759501425977 2.335046310206944 >10 3.7373846614469692 25.683495567817726 >50 0.07755332840491008 2.5005085935392324 >100 0.026975070748005633 2.1537703778515582 >500 0.0025289128826255277 0.801952118763234 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 4.21485480437588E-4 7.217377076501674 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37592 7.173648786612954 No Hit GCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 912 0.174036169753964 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 812 0.15495325640374863 No Hit CCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 693 0.1322445895169924 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 678 0.12938215251446006 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 579 0.1104900682977469 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.63316534008614E-4 0.0 0.0 0.10094861162263921 0.0 2 7.63316534008614E-4 0.0 0.0 0.527070066732948 0.0 3 7.63316534008614E-4 0.0 0.0 0.7749571111522454 0.0 4 7.63316534008614E-4 0.0 0.0 1.0900160105643009 0.0 5 7.63316534008614E-4 0.0 0.0 1.9481746239234852 0.0 6 7.63316534008614E-4 0.0 0.0 2.5031057441477476 0.0 7 9.541456675107676E-4 0.0 0.0 3.0225426455406095 0.0 8 9.541456675107676E-4 0.0 0.0 3.843680407000376 0.0 9 9.541456675107676E-4 0.0 0.0 4.180875485898681 0.0 10 9.541456675107676E-4 0.0 0.0 4.825687128002458 0.0 11 9.541456675107676E-4 0.0 0.0 5.748727646752374 0.0 12 9.541456675107676E-4 0.0 0.0 6.5143341303630145 0.0 13 9.541456675107676E-4 0.0 0.0 6.813554211694391 0.0 14 9.541456675107676E-4 0.0 0.0 6.94904289648092 0.0 15 9.541456675107676E-4 0.0 0.0 7.170213862209916 0.0 16 9.541456675107676E-4 0.0 0.0 7.619998129874491 0.0 17 9.541456675107676E-4 0.0 0.0 8.17187598396272 0.0 18 9.541456675107676E-4 0.0 0.0 8.747416650605215 0.0 19 9.541456675107676E-4 0.0 0.0 9.125067505805976 0.0 20 9.541456675107676E-4 0.0 0.0 9.484398764190532 0.0 21 9.541456675107676E-4 0.0 0.0 9.926931524782026 0.0 22 9.541456675107676E-4 0.0 0.0 10.386638907388713 0.0 23 9.541456675107676E-4 0.0 0.0 10.812378704232017 0.0 24 9.541456675107676E-4 0.0 0.0 11.146138858727284 0.0 25 9.541456675107676E-4 0.0 0.0 11.457953662869803 0.0 26 9.541456675107676E-4 0.0 0.0 11.759654522936708 0.0 27 9.541456675107676E-4 0.0 0.0 12.10810852071164 0.0 28 9.541456675107676E-4 0.0 0.0 12.423739907524203 0.0 29 9.541456675107676E-4 0.0 0.0 12.764560739959048 0.0 30 9.541456675107676E-4 0.0 0.0 13.16263031244454 0.0 31 9.541456675107676E-4 0.0 0.0 13.479406674058115 0.0 32 0.0011449748010129211 0.0 0.0 13.800381276608737 0.0 33 0.0013358039345150745 0.0 0.0 14.128607386232442 0.0 34 0.0013358039345150745 0.0 0.0 14.453207742319604 0.0 35 0.0013358039345150745 0.0 0.0 14.819027191243233 0.0 36 0.0013358039345150745 0.0 0.0 15.130460337118746 0.0 37 0.0013358039345150745 0.0 0.0 15.442847628661772 0.0 38 0.0013358039345150745 0.0 0.0 15.812674489388947 0.0 39 0.0013358039345150745 0.0 0.0 16.379055357623336 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCACGG 20 7.029768E-4 45.000004 2 CCCGGTA 20 7.029768E-4 45.000004 25 CGTTTGG 40 6.8030204E-9 45.000004 2 CCGCACG 20 7.029768E-4 45.000004 38 ATAGCGG 35 1.2102282E-7 45.0 2 ACGGGTA 35 1.2102282E-7 45.0 5 CGTTTTT 18960 0.0 44.584656 1 ACGGGAT 90 0.0 42.5 5 TACGGGA 105 0.0 40.714287 4 ATGGGCG 50 1.0786607E-9 40.5 5 GTTTTTT 20915 0.0 40.48171 2 AACGGGA 85 0.0 39.705883 4 ACACGCG 120 0.0 39.374996 36 ACGGGCC 75 0.0 39.0 5 GCGAGAT 175 0.0 38.571426 18 CGACGGA 35 6.241784E-6 38.571426 29 CGGCCTA 35 6.241784E-6 38.571426 45 TCGGCGT 35 6.241784E-6 38.571426 4 ATGACGG 35 6.241784E-6 38.571426 2 AGTACGG 35 6.241784E-6 38.571426 2 >>END_MODULE