##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935703.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 773665 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38369966329096 33.0 31.0 34.0 30.0 34.0 2 32.5868780415296 34.0 31.0 34.0 31.0 34.0 3 32.44147660809265 34.0 31.0 34.0 30.0 34.0 4 36.061390912087276 37.0 35.0 37.0 35.0 37.0 5 36.09482140202801 37.0 35.0 37.0 35.0 37.0 6 36.109030394292105 37.0 36.0 37.0 35.0 37.0 7 36.25208714366037 37.0 37.0 37.0 35.0 37.0 8 36.0313507784377 37.0 37.0 37.0 35.0 37.0 9 37.86100185480796 39.0 38.0 39.0 35.0 39.0 10 37.628340431582146 39.0 38.0 39.0 35.0 39.0 11 37.62226932845611 39.0 37.0 39.0 35.0 39.0 12 37.556055915674094 39.0 37.0 39.0 35.0 39.0 13 37.55468064343094 39.0 37.0 39.0 35.0 39.0 14 38.9042893241907 41.0 38.0 41.0 35.0 41.0 15 39.01360924948136 41.0 39.0 41.0 35.0 41.0 16 39.09803597164147 41.0 39.0 41.0 35.0 41.0 17 39.0614451991495 41.0 39.0 41.0 35.0 41.0 18 38.40577898702927 39.0 38.0 40.0 35.0 41.0 19 37.71124453090162 37.0 37.0 40.0 35.0 41.0 20 36.88504197553205 36.0 35.0 40.0 34.0 41.0 21 36.870540867171194 36.0 35.0 40.0 34.0 41.0 22 36.87404109013591 36.0 35.0 40.0 34.0 41.0 23 36.873411618723864 36.0 35.0 40.0 34.0 41.0 24 36.722483245332285 36.0 35.0 40.0 34.0 41.0 25 36.65107637026362 35.0 35.0 40.0 33.0 41.0 26 36.49607000445929 35.0 35.0 40.0 33.0 41.0 27 36.40271823075879 35.0 35.0 40.0 33.0 41.0 28 36.26261754118384 35.0 35.0 40.0 33.0 41.0 29 36.01077468930351 35.0 35.0 40.0 33.0 41.0 30 35.472244446885924 35.0 35.0 40.0 31.0 41.0 31 34.78846141417797 35.0 35.0 40.0 23.0 41.0 32 33.687261282337964 35.0 33.0 40.0 17.0 41.0 33 32.47390925012764 35.0 32.0 40.0 12.0 41.0 34 31.43440377941357 35.0 27.0 40.0 7.0 41.0 35 30.82400651444747 35.0 23.0 40.0 7.0 41.0 36 30.470220314994215 35.0 22.0 40.0 7.0 41.0 37 30.30609501528439 35.0 21.0 40.0 7.0 41.0 38 30.174613043112974 35.0 21.0 40.0 7.0 41.0 39 30.042249552454873 35.0 20.0 40.0 7.0 41.0 40 29.932276889868355 35.0 20.0 40.0 7.0 41.0 41 29.76254709725786 35.0 18.0 40.0 7.0 41.0 42 29.676124679286254 35.0 18.0 40.0 7.0 41.0 43 29.58618265011342 35.0 18.0 40.0 7.0 41.0 44 29.480978201159417 35.0 18.0 40.0 7.0 41.0 45 29.420574796585086 35.0 18.0 40.0 7.0 41.0 46 29.371698344890877 35.0 18.0 40.0 7.0 41.0 47 29.348086057919126 35.0 18.0 40.0 7.0 41.0 48 29.29040476175089 35.0 18.0 40.0 7.0 41.0 49 29.272170771587184 35.0 18.0 40.0 7.0 41.0 50 29.157148119664196 35.0 18.0 40.0 7.0 41.0 51 28.52767670761893 35.0 18.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 15.0 10 16.0 11 16.0 12 15.0 13 18.0 14 24.0 15 51.0 16 70.0 17 193.0 18 422.0 19 794.0 20 1412.0 21 2216.0 22 3924.0 23 6618.0 24 13122.0 25 27184.0 26 43745.0 27 49827.0 28 43508.0 29 32894.0 30 25135.0 31 21147.0 32 20210.0 33 22803.0 34 36431.0 35 47962.0 36 46811.0 37 49323.0 38 93819.0 39 183775.0 40 160.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.30160986990493 13.225103888633969 14.879825247361584 44.593460994099516 2 58.257256047514105 15.599516586636335 14.944323447486962 11.198903918362598 3 19.89750085631378 16.209211997440754 52.63453820452004 11.258748941725424 4 17.397969405362787 16.151952072279347 53.889732636218525 12.560345886139348 5 16.72687791227469 18.560100301810216 52.41092721009739 12.302094575817698 6 16.359406202943134 22.187768607859994 52.03401989233066 9.418805296866214 7 50.46383124478942 3.7940193753110196 42.4986266665805 3.243522713319072 8 51.07378516541397 3.8665313798607923 41.68432073313385 3.3753627215913866 9 47.53762933569439 4.484499104909748 42.95153587146891 5.026335687926945 10 25.727026555421272 16.06470500798149 48.25680365532886 9.951464781268378 11 19.559887031208596 16.353331222169803 51.820490780893536 12.26629096572806 12 17.549456159965874 14.72200500216502 54.572586326123066 13.155952511746042 13 16.35462377127051 15.085857574014593 56.26362831458061 12.295890340134296 14 13.580554891328934 17.72847421041407 55.48861587379551 13.202355024461493 15 13.025405052574435 16.5896091977794 57.52825835471425 12.856727394931916 16 15.326013196926318 16.582758687545642 54.933853799771214 13.15737431575682 17 15.68818545494497 16.341827535173493 54.00722534947297 13.962761660408574 18 16.13540744379027 16.01261527922292 54.80020422275791 13.051773054228896 19 15.428383085702468 17.466862272430575 53.88029702778334 13.224457614083615 20 15.828685542192034 17.791292096708524 54.25823838483065 12.1217839762688 21 15.32911531476802 17.918737438038427 54.891587444178036 11.860559803015517 22 14.553456599432572 15.41571610451552 55.42372990893991 14.607097387111992 23 13.907052794168017 17.096029935437173 55.17711154052465 13.819805729870163 24 14.279306935172201 16.443551149399287 55.059101807629915 14.218040107798597 25 14.443460670962239 17.625845811817776 53.3369093858453 14.59378413137469 26 13.484259983326115 17.240278415076293 54.08503680533564 15.190424796261947 27 14.028423154724589 16.839846703676656 54.80847653700245 14.323253604596303 28 12.471418508010574 17.459882507286746 54.543891736087325 15.524807248615357 29 13.74419160747869 17.28487135905075 53.32980036579139 15.641136667679165 30 14.574783659594267 17.246224140939553 53.293996755701755 14.88499544376442 31 14.570906012292143 18.634938894741264 50.657196590255474 16.13695850271112 32 15.315802059030718 20.472426696309125 48.68993685897643 15.521834385683725 33 15.93493307827031 21.179968074037212 45.97222311982577 16.912875727866712 34 15.34346260978589 22.750673741218744 44.1356401026284 17.770223546366967 35 16.24928101956273 24.701518098918783 41.419218912578444 17.629981968940044 36 16.926447493424156 25.823321463424094 39.50973612610109 17.74049491705066 37 16.652039319343643 26.517678840324947 39.79642351663834 17.03385832369307 38 17.553333807268004 26.114015756173536 38.06518325114875 18.267467185409707 39 17.713351385935773 25.80264067781275 38.011671718379404 18.472336217872076 40 18.922014050008727 24.309875721403966 38.87380196855228 17.89430826003503 41 17.3841391299852 25.48144222628657 37.991895717138554 19.142522926589674 42 17.977677677030755 24.744947748702604 38.914905029954824 18.362469544311814 43 17.732222602806125 24.601991818164194 38.82248776925413 18.84329780977555 44 17.23006727718069 24.338182546709493 38.281297460787286 20.150452715322523 45 17.338253636910032 23.781869413764355 38.19030200409738 20.68957494522823 46 17.88590669088042 24.12155131743067 38.55945402725986 19.43308796442905 47 15.981594100805903 24.36855745057615 40.78819644161232 18.861652007005617 48 16.452081973463965 24.189539400127963 40.02727278602496 19.33110584038311 49 17.03631416698442 23.096430625658392 40.799700128608634 19.067555078748555 50 16.33433075038938 22.8348186876749 40.57699391855648 20.25385664337924 51 15.95225323621981 22.869200493753755 39.16553030058229 22.01301596944414 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 146.0 1 370.0 2 594.0 3 42925.5 4 85257.0 5 56626.0 6 27995.0 7 27036.0 8 26077.0 9 25747.5 10 25418.0 11 24333.5 12 23249.0 13 22141.0 14 21033.0 15 19529.0 16 18025.0 17 16441.5 18 14858.0 19 13758.0 20 12658.0 21 11550.0 22 10442.0 23 9805.0 24 9168.0 25 8621.5 26 7856.5 27 7638.0 28 8088.5 29 8539.0 30 8825.5 31 9112.0 32 10188.5 33 11265.0 34 12741.0 35 14217.0 36 15562.5 37 16908.0 38 18451.0 39 19994.0 40 21135.0 41 22276.0 42 24744.5 43 27213.0 44 31309.5 45 35406.0 46 41591.0 47 47776.0 48 49103.0 49 50430.0 50 50208.5 51 49987.0 52 44709.5 53 39432.0 54 35306.5 55 31181.0 56 28316.5 57 25452.0 58 23001.5 59 20551.0 60 18726.5 61 16902.0 62 14826.5 63 12751.0 64 10662.5 65 8574.0 66 7172.5 67 5771.0 68 4883.0 69 3995.0 70 3101.5 71 2208.0 72 1733.0 73 1258.0 74 1102.0 75 694.5 76 443.0 77 310.5 78 178.0 79 164.0 80 150.0 81 106.5 82 63.0 83 47.0 84 31.0 85 23.0 86 15.0 87 9.0 88 3.0 89 3.5 90 4.0 91 2.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 773665.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.48858754479546 #Duplication Level Percentage of deduplicated Percentage of total 1 80.75942080062461 35.92872562355563 2 7.863410053372963 6.996640131202156 3 2.8182541585078944 3.761404405627869 4 1.4556624785653836 2.5904147045332007 5 0.9755220521549374 2.1699799109586726 6 0.7361772433603595 1.9650891443834126 7 0.5799612488562361 1.8061159754630696 8 0.5082657207631325 1.8089619211351347 9 0.44110591583428665 1.7661761237808757 >10 3.7473650571350485 27.879436241670764 >50 0.06416660811283051 2.0003626011551474 >100 0.04629369195703555 3.3541840615929117 >500 0.0026369824532447993 0.7951392342490572 >1k 0.0014649902518026662 0.8561433591061981 >5k 0.0 0.0 >10k+ 2.929980503605333E-4 6.321226561585866 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 48494 6.268087608978046 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGC 1588 0.20525679719258336 No Hit GAATCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTC 1452 0.18767812942294146 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCG 1245 0.1609223630382659 No Hit GCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 1173 0.1516160095131614 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1110 0.1434729501786949 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 926 0.11969004672564998 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 823 0.10637679098834767 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.170196402835852E-4 0.0 0.0 0.0950023589021088 0.0 2 5.170196402835852E-4 0.0 0.0 0.4361060665792042 0.0 3 5.170196402835852E-4 0.0 0.0 0.6478256092753324 0.0 4 5.170196402835852E-4 0.0 0.0 0.9519624126721514 0.0 5 5.170196402835852E-4 0.0 0.0 1.8290862324132537 0.0 6 5.170196402835852E-4 0.0 0.0 2.308880458596421 0.0 7 5.170196402835852E-4 0.0 0.0 2.7645040165963306 0.0 8 5.170196402835852E-4 0.0 0.0 3.511597396806111 0.0 9 5.170196402835852E-4 0.0 0.0 3.7766992173615197 0.0 10 5.170196402835852E-4 0.0 0.0 4.530126088164774 0.0 11 5.170196402835852E-4 0.0 0.0 5.393936652168574 0.0 12 5.170196402835852E-4 0.0 0.0 6.306605572179173 0.0 13 5.170196402835852E-4 0.0 0.0 6.598721668939399 0.0 14 5.170196402835852E-4 0.0 0.0 6.734180814693699 0.0 15 5.170196402835852E-4 0.0 0.0 6.969166241202588 0.0 16 5.170196402835852E-4 0.0 0.0 7.411605798375266 0.0 17 5.170196402835852E-4 0.0 0.0 7.939224341284665 0.0 18 5.170196402835852E-4 0.0 0.0 8.52125920133391 0.0 19 5.170196402835852E-4 0.0 0.0 8.923888246204752 0.0 20 5.170196402835852E-4 0.0 0.0 9.311265211687228 0.0 21 5.170196402835852E-4 0.0 0.0 9.784208927636639 0.0 22 6.462745503544816E-4 0.0 0.0 10.278350448837676 0.0 23 6.462745503544816E-4 0.0 0.0 10.758532439751056 0.0 24 6.462745503544816E-4 0.0 0.0 11.135698267337931 0.0 25 6.462745503544816E-4 0.0 0.0 11.471373268792048 0.0 26 6.462745503544816E-4 0.0 0.0 11.795156818519644 0.0 27 7.755294604253779E-4 0.0 0.0 12.14233550697007 0.0 28 7.755294604253779E-4 0.0 0.0 12.464826507596957 0.0 29 7.755294604253779E-4 0.0 0.0 12.82557696160483 0.0 30 7.755294604253779E-4 0.0 0.0 13.234539497069145 0.0 31 9.047843704962742E-4 0.0 0.0 13.595936225627371 0.0 32 9.047843704962742E-4 0.0 0.0 13.932516011451986 0.0 33 0.0010340392805671705 0.0 0.0 14.279177680262128 0.0 34 0.0010340392805671705 0.0 0.0 14.626614878532699 0.0 35 0.0010340392805671705 0.0 0.0 14.991242979842697 0.0 36 0.0010340392805671705 0.0 0.0 15.322652569264475 0.0 37 0.0010340392805671705 0.0 0.0 15.677586552319156 0.0 38 0.0010340392805671705 0.0 0.0 16.05875928211823 0.0 39 0.0010340392805671705 0.0 0.0 16.575908177311884 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAATGCG 70 0.0 45.000004 1 TACTTCG 25 3.88962E-5 45.0 28 TTAGACG 20 7.0318556E-4 45.0 1 CGATTCG 25 3.88962E-5 45.0 10 ACGATAG 20 7.0318556E-4 45.0 1 CGTAGCG 20 7.0318556E-4 45.0 1 ACTACGG 20 7.0318556E-4 45.0 2 GCGATTC 40 6.8102963E-9 45.0 9 CACCGGT 20 7.0318556E-4 45.0 40 TACGTAC 20 7.0318556E-4 45.0 13 TAATCGG 20 7.0318556E-4 45.0 2 ACGCACT 30 2.1645792E-6 44.999996 40 TACGCAC 30 2.1645792E-6 44.999996 39 GCTAGCG 60 0.0 44.999996 1 CGTTTTT 28735 0.0 44.639812 1 CGTAAGG 110 0.0 40.909092 2 GTTTTTT 32145 0.0 40.04433 2 GGCGTAG 45 1.9268555E-8 40.0 1 TACGAGG 45 1.9268555E-8 40.0 2 TCGTAAG 45 1.9268555E-8 40.0 1 >>END_MODULE