##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935701.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 535001 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.47037669088469 34.0 31.0 34.0 31.0 34.0 2 32.668346414305766 34.0 31.0 34.0 31.0 34.0 3 32.51567193332349 34.0 31.0 34.0 31.0 34.0 4 36.110962409416054 37.0 35.0 37.0 35.0 37.0 5 36.14460720634167 37.0 35.0 37.0 35.0 37.0 6 36.16788940581419 37.0 37.0 37.0 35.0 37.0 7 36.30345737671519 37.0 37.0 37.0 35.0 37.0 8 36.10966895388981 37.0 37.0 37.0 35.0 37.0 9 37.90725624811916 39.0 38.0 39.0 35.0 39.0 10 37.74765467728098 39.0 38.0 39.0 35.0 39.0 11 37.735361242315435 39.0 38.0 39.0 35.0 39.0 12 37.700514578477424 39.0 38.0 39.0 35.0 39.0 13 37.72378556301764 39.0 38.0 39.0 35.0 39.0 14 39.170850147943646 41.0 39.0 41.0 35.0 41.0 15 39.25227616396979 41.0 39.0 41.0 35.0 41.0 16 39.295889166562304 41.0 39.0 41.0 35.0 41.0 17 39.26112100725045 41.0 39.0 41.0 35.0 41.0 18 38.60517830807793 39.0 39.0 41.0 35.0 41.0 19 37.92728985553298 37.0 37.0 41.0 35.0 41.0 20 37.12243154685692 37.0 35.0 41.0 34.0 41.0 21 37.09163347358229 37.0 35.0 41.0 34.0 41.0 22 37.074558739142546 37.0 35.0 41.0 34.0 41.0 23 37.07341855435784 37.0 35.0 41.0 34.0 41.0 24 36.92574780234056 37.0 35.0 41.0 34.0 41.0 25 36.8414059039142 36.0 35.0 41.0 34.0 41.0 26 36.69341178801535 36.0 35.0 40.0 33.0 41.0 27 36.61867921742202 36.0 35.0 40.0 33.0 41.0 28 36.472969209403345 36.0 35.0 40.0 33.0 41.0 29 36.209285590120395 36.0 35.0 40.0 33.0 41.0 30 35.69622673602479 36.0 35.0 40.0 31.0 41.0 31 35.01575511073811 36.0 35.0 40.0 24.0 41.0 32 33.962431845921785 36.0 34.0 40.0 18.0 41.0 33 32.75149392244127 36.0 33.0 40.0 12.0 41.0 34 31.761699510842035 36.0 30.0 40.0 8.0 41.0 35 31.151459529982187 36.0 24.0 40.0 7.0 41.0 36 30.7721387436659 36.0 23.0 40.0 7.0 41.0 37 30.584180216485578 35.0 22.0 40.0 7.0 41.0 38 30.39934878626395 35.0 21.0 40.0 7.0 41.0 39 30.23869488094415 35.0 21.0 40.0 7.0 41.0 40 30.096098885796476 35.0 20.0 40.0 7.0 41.0 41 29.925463690722072 35.0 19.0 40.0 7.0 41.0 42 29.80552372799303 35.0 18.0 40.0 7.0 41.0 43 29.693008050452242 35.0 18.0 40.0 7.0 41.0 44 29.575868082489567 35.0 18.0 40.0 7.0 41.0 45 29.493754217281836 35.0 18.0 40.0 7.0 41.0 46 29.429202936069277 35.0 18.0 40.0 7.0 41.0 47 29.427288920955288 35.0 18.0 40.0 7.0 41.0 48 29.382027323313416 35.0 18.0 40.0 7.0 41.0 49 29.356451670183795 35.0 18.0 40.0 7.0 41.0 50 29.254715411746893 35.0 18.0 40.0 7.0 41.0 51 28.67757069612954 35.0 18.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 7.0 9 7.0 10 7.0 11 8.0 12 12.0 13 6.0 14 20.0 15 25.0 16 45.0 17 101.0 18 260.0 19 519.0 20 856.0 21 1385.0 22 2400.0 23 4169.0 24 8662.0 25 17753.0 26 29853.0 27 35295.0 28 30296.0 29 22489.0 30 16822.0 31 13980.0 32 12838.0 33 14140.0 34 21380.0 35 30934.0 36 32840.0 37 34761.0 38 66160.0 39 136835.0 40 134.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.363317077912008 13.786703202423919 15.860531101811024 44.98944861785305 2 57.78437797312529 15.492494406552511 15.357728303311582 11.365399317010622 3 20.50781213493059 15.937540303662983 52.37934134702552 11.175306214380907 4 18.456414100160558 16.40258616339035 52.57560266242493 12.56539707402416 5 16.37903480554242 19.442767396696457 51.94756645314682 12.23063134461431 6 17.030996203745413 22.005005598120377 51.0442036556941 9.919794542440108 7 51.941958986992546 3.749899532898069 41.19151179156674 3.116629688542638 8 52.7913031938258 3.452143080106392 40.757306995687856 2.999246730379943 9 48.41224595841877 5.617559593346554 42.13543526086867 3.8347591873660045 10 23.53715226700511 21.41902538499928 46.20178280040598 8.84203954758963 11 18.185573484909373 17.14482776667707 52.682705265971464 11.986893482442088 12 17.16127633406293 15.369503982235546 54.7632621247437 12.705957558957834 13 15.598662432406668 16.375296494772908 55.08139237122921 12.944648701591213 14 13.02390088990488 18.399404860925493 54.229805177934246 14.346889071235381 15 12.364649785701335 18.165012775677056 56.63484741150017 12.835490027121443 16 14.587075538176563 17.27361257268678 55.2417659032413 12.897545985895354 17 14.410066523240145 16.933426292661135 53.609619421272114 15.04688776282661 18 14.939411328203125 17.293051788688246 54.385692737022914 13.381844146085708 19 15.488756095783 17.76763034087787 53.14943336554511 13.594180197794023 20 16.446885146009073 17.230061252221958 53.53018031741996 12.792873284349001 21 15.745391130110036 17.623144629636204 53.78345087205445 12.848013368199313 22 15.25567241930389 16.350997474771077 53.44662907172136 14.946701034203674 23 14.472309397552527 17.526135465167357 53.892235715447256 14.109319421832856 24 14.390253476161726 16.928566488660767 54.11952501023363 14.561655024943878 25 14.224272477995367 18.176975370139495 53.343264778944345 14.255487372920797 26 13.938291704127655 18.225760325681634 53.16532118631554 14.670626783875171 27 14.182777228453777 17.63099508225218 53.60120822204071 14.585019467253332 28 12.900162803434013 18.162022127061444 54.014665393148796 14.923149676355745 29 13.614553991487865 17.34800495700008 53.84756290175159 15.18987814976047 30 14.21642202537939 18.07398490843942 52.05167840807774 15.657914658103442 31 14.845579727888358 19.231365922680517 50.12214930439383 15.8009050450373 32 15.44034497131781 21.03042798050845 48.224395842250765 15.30483120592298 33 15.15342961975772 22.432855265691092 45.75524157898771 16.658473535563484 34 15.419597346547015 23.5793951787006 43.766273334068536 17.234734140683848 35 16.560529793402257 23.890609550262525 41.3859039515814 18.16295670475382 36 16.690062261565867 25.88350302148968 39.49487944882346 17.931555268120995 37 17.36987407500173 26.034717692116466 39.157123070798 17.438285162083808 38 17.493238330395645 26.581071811080726 37.962919695477204 17.962770163046425 39 18.166134268907907 25.703690273476127 38.01189156655782 18.118283891058148 40 18.871553511114932 25.32593397021688 38.82048818600339 16.9820243326648 41 17.54987373855376 25.396214212683716 38.039368150713734 19.01454389804879 42 18.14594739075254 25.257335967596322 37.441986089745626 19.154730551905512 43 18.166134268907907 25.021448558040078 37.523481264521 19.288935908531013 44 17.672864162870724 25.421634725916398 37.17656602511023 19.72893508610264 45 17.736976192567862 24.919018842955435 37.331332090968054 20.012672873508645 46 18.02875134812832 25.11079418543143 37.62871471268278 19.23173975375747 47 17.279406954379525 24.2919172113697 39.36142175435186 19.067254079898916 48 17.13211751006073 23.44780663961376 39.75431821622764 19.66575763409788 49 17.346509632692275 23.226498642058612 39.61543997114024 19.811551754108873 50 16.32482929938449 23.415470251457474 39.949831869473144 20.3098685796849 51 16.439782355547 23.26425558083069 38.617497911218855 21.678464152403453 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 102.0 1 260.5 2 419.0 3 27733.0 4 55047.0 5 37550.0 6 20053.0 7 19341.0 8 18629.0 9 17952.0 10 17275.0 11 16877.0 12 16479.0 13 15572.0 14 14665.0 15 13762.5 16 12860.0 17 11864.0 18 10868.0 19 9961.0 20 9054.0 21 8221.0 22 7388.0 23 6820.5 24 6253.0 25 5884.0 26 5449.5 27 5384.0 28 5788.0 29 6192.0 30 6848.5 31 7505.0 32 8009.0 33 8513.0 34 9529.0 35 10545.0 36 11574.5 37 12604.0 38 13298.0 39 13992.0 40 15609.0 41 17226.0 42 18845.5 43 20465.0 44 22571.0 45 24677.0 46 27415.5 47 30154.0 48 31893.5 49 33633.0 50 32962.0 51 32291.0 52 28632.0 53 24973.0 54 22521.5 55 20070.0 56 18088.5 57 16107.0 58 15080.5 59 14054.0 60 13226.0 61 12398.0 62 11044.0 63 9690.0 64 8565.0 65 7440.0 66 5978.0 67 4516.0 68 3825.5 69 3135.0 70 2560.0 71 1985.0 72 1632.5 73 1280.0 74 1061.0 75 613.5 76 385.0 77 276.5 78 168.0 79 146.5 80 125.0 81 76.0 82 27.0 83 18.5 84 10.0 85 7.0 86 4.0 87 2.0 88 0.0 89 0.5 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 535001.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.23229096171148 #Duplication Level Percentage of deduplicated Percentage of total 1 80.51609543255236 36.419274557061364 2 7.279988897941199 6.585811520594112 3 2.7167067708760246 3.686486133537479 4 1.6012358092682806 2.897102560925376 5 1.157989056259804 2.6189248961610567 6 0.8923616312957214 2.421813656990134 7 0.7351136817955951 2.327561316143934 8 0.6776883409423913 2.4522716975092615 9 0.5615182368023507 2.285888064061602 >10 3.7459079393529535 26.590744022971492 >50 0.08384758629207575 2.6022619452640594 >100 0.028225920134818384 2.196339122158409 >500 0.002905609425643069 0.8351270657685592 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 4.150870608061527E-4 6.080393440853145 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 32385 6.0532597135332455 No Hit CCTGTCTCTTATACACATCTGACGCTCCAAAGCTCGTATGCCGTCTTCTGC 733 0.1370090897026361 RNA PCR Primer, Index 13 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 720 0.1345791877024529 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 673 0.12579415739409833 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 622 0.11626146493184125 No Hit GCTGTCTCTTATACACATCTGACGCTCCAAAGCTCGTATGCCGTCTTCTGC 606 0.11327081631623119 Illumina Single End Adapter 1 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 553 0.10336429277702285 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA 541 0.1011213063153153 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09476617800714392 0.0 2 0.0 0.0 0.0 0.43513937357126437 0.0 3 0.0 0.0 0.0 0.6622417528191537 0.0 4 0.0 0.0 0.0 0.9246711688389367 0.0 5 0.0 0.0 0.0 1.6295296644305337 0.0 6 0.0 0.0 0.0 2.0820521830800316 0.0 7 0.0 0.0 0.0 2.471210334186291 0.0 8 0.0 0.0 0.0 3.0947605705409895 0.0 9 0.0 0.0 0.0 3.336068530713027 0.0 10 0.0 0.0 0.0 3.8895254401393644 0.0 11 0.0 0.0 0.0 4.589337216192119 0.0 12 0.0 0.0 0.0 5.259616337165725 0.0 13 0.0 0.0 0.0 5.543914871187157 0.0 14 0.0 0.0 0.0 5.656438025349486 0.0 15 0.0 0.0 0.0 5.854194665056701 0.0 16 0.0 0.0 0.0 6.219614542776555 0.0 17 0.0 0.0 0.0 6.689894037581238 0.0 18 0.0 0.0 0.0 7.171762295771409 0.0 19 0.0 0.0 0.0 7.488957964564552 0.0 20 0.0 0.0 0.0 7.800546167203426 0.0 21 0.0 0.0 0.0 8.184096852155417 0.0 22 0.0 0.0 0.0 8.61026427987985 0.0 23 0.0 0.0 0.0 9.03231956575782 0.0 24 1.8691553847562903E-4 0.0 0.0 9.384281524707431 0.0 25 1.8691553847562903E-4 0.0 0.0 9.683159470729962 0.0 26 1.8691553847562903E-4 0.0 0.0 9.970448653367002 0.0 27 1.8691553847562903E-4 0.0 0.0 10.278111629697888 0.0 28 1.8691553847562903E-4 0.0 0.0 10.570634447412248 0.0 29 1.8691553847562903E-4 0.0 0.0 10.86390492728051 0.0 30 1.8691553847562903E-4 0.0 0.0 11.227642565154083 0.0 31 1.8691553847562903E-4 0.0 0.0 11.567081183025826 0.0 32 3.7383107695125806E-4 0.0 0.0 11.886893669357628 0.0 33 3.7383107695125806E-4 0.0 0.0 12.188762263995768 0.0 34 3.7383107695125806E-4 0.0 0.0 12.493434591711043 0.0 35 3.7383107695125806E-4 0.0 0.0 12.827639574505469 0.0 36 3.7383107695125806E-4 0.0 0.0 13.165209036992454 0.0 37 3.7383107695125806E-4 0.0 0.0 13.486329932093584 0.0 38 3.7383107695125806E-4 0.0 0.0 13.812123715656606 0.0 39 3.7383107695125806E-4 0.0 0.0 14.133244610757737 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATG 20 7.029902E-4 45.0 1 GACGTAG 20 7.029902E-4 45.0 1 TAACGTG 20 7.029902E-4 45.0 1 ACGGGTC 40 6.8030204E-9 45.0 5 TAGTTCG 20 7.029902E-4 45.0 1 AACGGGC 35 1.210301E-7 45.0 4 AAATGCG 20 7.029902E-4 45.0 1 CGTTTTT 19580 0.0 44.52886 1 TACGAAT 85 0.0 42.352943 12 CGAATAT 85 0.0 42.352943 14 CGTGCGG 70 0.0 41.785713 2 CGACCAG 45 1.9250365E-8 40.0 12 GCTACGA 90 0.0 40.0 10 CCTATGC 90 0.0 40.0 35 AGCTACG 90 0.0 40.0 9 GTTTTTT 21890 0.0 39.963455 2 ACGGGAG 170 0.0 39.705883 5 TACGGGT 40 3.453606E-7 39.375 4 CCTCGTC 75 0.0 39.0 36 CGAACGG 35 6.2420295E-6 38.571426 2 >>END_MODULE