##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935697.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 398435 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38385182024672 33.0 31.0 34.0 30.0 34.0 2 32.58330969919811 34.0 31.0 34.0 31.0 34.0 3 32.43325009098096 34.0 31.0 34.0 30.0 34.0 4 36.04973960620929 37.0 35.0 37.0 35.0 37.0 5 36.094908830800506 37.0 35.0 37.0 35.0 37.0 6 36.112296861470504 37.0 36.0 37.0 35.0 37.0 7 36.25057035651989 37.0 37.0 37.0 35.0 37.0 8 36.000559689786286 37.0 37.0 37.0 35.0 37.0 9 37.82301253654925 39.0 38.0 39.0 35.0 39.0 10 37.68891287161018 39.0 38.0 39.0 35.0 39.0 11 37.655429367399954 39.0 37.0 39.0 35.0 39.0 12 37.61819870242323 39.0 37.0 39.0 35.0 39.0 13 37.59786665328096 39.0 37.0 39.0 35.0 39.0 14 39.01636653406453 41.0 39.0 41.0 35.0 41.0 15 39.12100593572352 41.0 39.0 41.0 35.0 41.0 16 39.15758906722552 41.0 39.0 41.0 35.0 41.0 17 39.11392824425565 41.0 39.0 41.0 35.0 41.0 18 38.47121864294051 39.0 38.0 41.0 35.0 41.0 19 37.778455707957384 37.0 37.0 41.0 35.0 41.0 20 36.979090692333756 36.0 35.0 40.0 34.0 41.0 21 36.95369131727885 36.0 35.0 40.0 34.0 41.0 22 36.93628069823183 36.0 35.0 40.0 34.0 41.0 23 36.95421837940944 36.0 35.0 40.0 34.0 41.0 24 36.79153437825492 36.0 35.0 40.0 34.0 41.0 25 36.71005810232535 36.0 35.0 40.0 34.0 41.0 26 36.552117660346106 35.0 35.0 40.0 33.0 41.0 27 36.48661889643229 35.0 35.0 40.0 33.0 41.0 28 36.343177682683496 35.0 35.0 40.0 33.0 41.0 29 36.11775822907124 35.0 35.0 40.0 33.0 41.0 30 35.59384843199016 35.0 35.0 40.0 31.0 41.0 31 34.93573104772422 35.0 35.0 40.0 25.0 41.0 32 33.91671163426908 35.0 34.0 40.0 18.0 41.0 33 32.7954145594639 35.0 33.0 40.0 12.0 41.0 34 31.86888702046758 35.0 31.0 40.0 8.0 41.0 35 31.304792500658827 35.0 26.0 40.0 7.0 41.0 36 30.9616499554507 35.0 23.0 40.0 7.0 41.0 37 30.79976407695107 35.0 23.0 40.0 7.0 41.0 38 30.66195238872087 35.0 23.0 40.0 7.0 41.0 39 30.54598115125428 35.0 23.0 40.0 7.0 41.0 40 30.40910060612145 35.0 22.0 40.0 7.0 41.0 41 30.219707104044573 35.0 22.0 40.0 7.0 41.0 42 30.10796491272102 35.0 21.0 40.0 7.0 41.0 43 29.9937630981214 35.0 21.0 40.0 7.0 41.0 44 29.887657961775446 35.0 20.0 40.0 7.0 41.0 45 29.835862813256867 35.0 20.0 40.0 7.0 41.0 46 29.783490406214312 35.0 20.0 40.0 7.0 41.0 47 29.805792663797106 35.0 20.0 40.0 7.0 41.0 48 29.753249589017027 35.0 20.0 40.0 7.0 41.0 49 29.74484169312435 35.0 20.0 40.0 7.0 41.0 50 29.633069383964763 35.0 20.0 40.0 7.0 41.0 51 29.047335198965953 35.0 20.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 6.0 10 9.0 11 6.0 12 6.0 13 8.0 14 13.0 15 16.0 16 47.0 17 89.0 18 237.0 19 386.0 20 659.0 21 977.0 22 1539.0 23 2812.0 24 5727.0 25 11726.0 26 20062.0 27 25028.0 28 22484.0 29 17315.0 30 12777.0 31 11187.0 32 10396.0 33 11484.0 34 18264.0 35 27715.0 36 28069.0 37 25837.0 38 48493.0 39 94964.0 40 93.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.716528417433206 12.935359594413143 14.876203144804045 45.47190884334961 2 58.47478258687113 15.41807321143976 14.961537013565577 11.145607188123535 3 20.776036241796028 15.201726755932587 53.073148694266315 10.94908830800507 4 18.398735050886593 16.064602758291816 53.058340758216524 12.478321432605068 5 16.409200998908226 19.310050572866338 51.438754125516084 12.84199430270935 6 16.783666093591176 21.962177017581286 51.49020542873994 9.763951460087593 7 50.084204449910274 4.238081493844667 42.05253052568173 3.625183530563329 8 50.0217099401408 4.207963657811186 41.92578463237416 3.844541769673849 9 46.1104069672594 5.453085195828679 43.60334809943905 4.8331597374728625 10 25.215907237065018 17.60513007140437 47.89388482437537 9.285077867155245 11 19.001593735490104 16.556778395472286 51.962553490531704 12.479074378505905 12 18.331471883745152 14.847089236638347 54.368215643705994 12.4532232359105 13 15.189428639552249 16.173277949979294 55.475548081870315 13.16174532859814 14 12.596784921003426 18.594250003137276 54.64329187947846 14.16567319638084 15 12.227088483692446 17.235182652126444 57.515278527237825 13.022450336943288 16 13.611505013364788 16.719665692020026 56.35398496618018 13.314844328435003 17 13.119580358151268 16.746269780516272 54.176967384893395 15.957182476439069 18 14.306474079837365 16.903133509857316 55.01298831678943 13.77740409351588 19 15.244644672280296 17.577020091106455 53.378342766072265 13.799992470540992 20 16.364777190758844 17.03414609660296 53.91142846386487 12.689648248773326 21 15.431375255687879 17.319512593020193 54.136559288215146 13.112552863076788 22 14.056747022726418 16.345702561270972 53.61501876090203 15.982531655100582 23 13.717921367349756 17.013063611379522 54.33006638473026 14.938948636540465 24 14.565738451692244 15.921041073198891 54.56247568612195 14.950744788986912 25 13.682532910010417 16.988467378618846 53.50308080364425 15.82591890772648 26 12.538808086638975 18.091784105312033 54.05473916699085 15.314668641058141 27 14.367211715838216 17.24296309310176 54.455306386236145 13.934518804823872 28 11.573782423732855 18.191674928156413 55.260958500131764 14.973584147978968 29 13.664462208390326 16.211678190921983 54.3973295518717 15.726530048815993 30 14.136559288215143 16.645876993738 54.12275528003313 15.094808438013729 31 15.356331647571123 18.504398458970723 50.99602193582391 15.143247957634243 32 15.488097180217602 19.597675906986083 49.462020153851945 15.45220675894437 33 16.06610865009349 20.315484332450715 47.14269579730696 16.47571122014883 34 15.607062632549852 21.365090918217525 45.608694015335 17.419152433897626 35 16.09095586482111 22.563529810383123 42.94778320177695 18.39773112301881 36 16.986710504850226 24.42431011331836 40.96678253667474 17.622196845156676 37 17.18071956529923 24.567871798411282 42.242523874659604 16.008884761629876 38 16.47972693161996 25.843864118363097 40.21860529320968 17.457803656807258 39 18.676070124361566 23.609120684678807 39.915419077139305 17.79939011382032 40 18.74785096690803 23.566202768331095 40.267797758731035 17.418148506029844 41 15.949653017430698 25.14613425025412 39.11779838618595 19.78641434612923 42 16.60898264459699 24.66675869338788 39.393125603925355 19.331133058089776 43 17.541380651800168 24.086488385809478 39.617754464341736 18.754376498048615 44 16.950318119643104 23.94543652038601 39.62628785121789 19.477957508752997 45 17.773789953191862 23.32977775546827 39.10299045013616 19.79344184120371 46 17.67264422051276 23.683913310828615 39.99196857705774 18.65147389160089 47 16.55351562990199 22.6925345413932 42.40741902694292 18.346530801761894 48 16.177293661450427 21.909470804522694 42.21893156976671 19.69430396426017 49 16.29299634821238 21.518440900021332 43.16613751301969 19.022425238746596 50 15.571674175210513 21.001167066146298 43.11845093930001 20.30870781934318 51 15.555611329325988 21.180368190545508 41.3578124411761 21.9062080389524 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 112.0 1 261.0 2 410.0 3 24890.0 4 49370.0 5 32486.0 6 15602.0 7 14752.0 8 13902.0 9 13384.0 10 12866.0 11 12196.0 12 11526.0 13 10759.5 14 9993.0 15 9164.5 16 8336.0 17 7602.0 18 6868.0 19 6157.5 20 5447.0 21 5003.5 22 4560.0 23 4240.0 24 3920.0 25 3876.0 26 3986.0 27 4140.0 28 4066.0 29 3992.0 30 4262.5 31 4533.0 32 5137.5 33 5742.0 34 6416.0 35 7090.0 36 7660.5 37 8231.0 38 9044.0 39 9857.0 40 10944.0 41 12031.0 42 12981.5 43 13932.0 44 16035.0 45 18138.0 46 20445.5 47 22753.0 48 25006.5 49 27260.0 50 26755.0 51 26250.0 52 22760.5 53 19271.0 54 16796.5 55 14322.0 56 13416.5 57 12511.0 58 11683.5 59 10856.0 60 10210.0 61 9564.0 62 8675.5 63 7787.0 64 6539.0 65 5291.0 66 4137.5 67 2984.0 68 2497.5 69 2011.0 70 1662.0 71 1313.0 72 1058.0 73 803.0 74 678.0 75 421.5 76 290.0 77 187.5 78 85.0 79 66.5 80 48.0 81 39.5 82 31.0 83 25.0 84 19.0 85 10.5 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 398435.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.97686544559466 #Duplication Level Percentage of deduplicated Percentage of total 1 80.1327007674704 34.43852298675676 2 8.264873915533212 7.10396748385352 3 2.76749250904321 3.5681445954852364 4 1.4168140547738108 2.435609079737658 5 0.9614486630495318 2.0660024912363304 6 0.703043136142448 1.8128754158665723 7 0.6053645739018818 1.8211670286677646 8 0.5296164942254394 1.8209005448075422 9 0.46807484333149174 1.810475060429279 >10 4.011058839300713 29.147827086658534 >50 0.10242668085081723 3.000934439747137 >100 0.03355356786492288 2.6113341162594796 >500 0.0029432954267476215 0.898863603475095 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 5.886590853495243E-4 7.463376067019077 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29501 7.404219006864357 No Hit GCTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCTGC 941 0.23617403089588015 TruSeq Adapter, Index 14 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCTGC 895 0.22462886041637908 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 604 0.15159310803518766 No Hit CTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCTGCT 579 0.1453185588615458 TruSeq Adapter, Index 21 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 534 0.13402437034899042 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 499 0.1252400015058918 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA 415 0.1041575162824551 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.019639338913499E-4 0.0 0.0 0.14958525229962227 0.0 2 5.019639338913499E-4 0.0 0.0 0.7923500696474959 0.0 3 5.019639338913499E-4 0.0 0.0 1.0947833398170341 0.0 4 5.019639338913499E-4 0.0 0.0 1.4742680738388947 0.0 5 5.019639338913499E-4 0.0 0.0 2.521113857969305 0.0 6 5.019639338913499E-4 0.0 0.0 3.0255876115301117 0.0 7 5.019639338913499E-4 0.0 0.0 3.561936074893019 0.0 8 5.019639338913499E-4 0.0 0.0 4.365078369119178 0.0 9 5.019639338913499E-4 0.0 0.0 4.645676208164444 0.0 10 5.019639338913499E-4 0.0 0.0 5.372018020505227 0.0 11 5.019639338913499E-4 0.0 0.0 6.381216509593786 0.0 12 5.019639338913499E-4 0.0 0.0 7.223261008696525 0.0 13 5.019639338913499E-4 0.0 0.0 7.575388708321307 0.0 14 5.019639338913499E-4 0.0 0.0 7.72146021308369 0.0 15 5.019639338913499E-4 0.0 0.0 8.016364024244858 0.0 16 5.019639338913499E-4 0.0 0.0 8.569779261360072 0.0 17 7.529459008370249E-4 0.0 0.0 9.203508727897901 0.0 18 7.529459008370249E-4 0.0 0.0 9.916046532056672 0.0 19 7.529459008370249E-4 0.0 0.0 10.337696236525405 0.0 20 0.0010039278677826998 0.0 0.0 10.741024257407105 0.0 21 0.0010039278677826998 0.0 0.0 11.234454804422302 0.0 22 0.0010039278677826998 0.0 0.0 11.75398747599985 0.0 23 0.0010039278677826998 0.0 0.0 12.269504436106265 0.0 24 0.0012549098347283748 0.0 0.0 12.708722878261197 0.0 25 0.0015058918016740497 0.0 0.0 13.086952702448329 0.0 26 0.0015058918016740497 0.0 0.0 13.432554870932524 0.0 27 0.0017568737686197247 0.0 0.0 13.745278401746834 0.0 28 0.0017568737686197247 0.0 0.0 14.085358966958225 0.0 29 0.0017568737686197247 0.0 0.0 14.416153199392623 0.0 30 0.0017568737686197247 0.0 0.0 14.837802903861357 0.0 31 0.0017568737686197247 0.0 0.0 15.20724835920539 0.0 32 0.0017568737686197247 0.0 0.0 15.567909445706325 0.0 33 0.0017568737686197247 0.0 0.0 15.91526848795914 0.0 34 0.0017568737686197247 0.0 0.0 16.252086287600235 0.0 35 0.0017568737686197247 0.0 0.0 16.62730432818402 0.0 36 0.0017568737686197247 0.0 0.0 16.991981126156087 0.0 37 0.0017568737686197247 0.0 0.0 17.329300889731073 0.0 38 0.0017568737686197247 0.0 0.0 17.67766385985167 0.0 39 0.0017568737686197247 0.0 0.0 18.016238533261387 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAAGT 20 7.027731E-4 45.000004 28 GGTACAC 20 7.027731E-4 45.000004 8 TACCAAG 20 7.027731E-4 45.000004 29 TTTCGCG 20 7.027731E-4 45.000004 1 CGCGACC 20 7.027731E-4 45.000004 10 GCTGACG 20 7.027731E-4 45.000004 1 GACCCAC 30 2.161918E-6 45.000004 12 TGCGAGG 60 0.0 45.000004 2 TCAGACG 20 7.027731E-4 45.000004 22 GGTGCGT 20 7.027731E-4 45.000004 9 CAAGCGC 20 7.027731E-4 45.000004 27 TAGGCGG 20 7.027731E-4 45.000004 2 CAGTCCC 20 7.027731E-4 45.000004 38 GCGTAAG 20 7.027731E-4 45.000004 1 GTACCGG 25 3.8862017E-5 45.0 2 TCGATGG 25 3.8862017E-5 45.0 2 GCGGGTA 45 3.8380676E-10 45.0 5 GGTATTA 25 3.8862017E-5 45.0 8 CGAATGG 25 3.8862017E-5 45.0 2 CGTTTTT 15240 0.0 44.542324 1 >>END_MODULE