##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935696.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 216208 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.408315140975354 33.0 31.0 34.0 30.0 34.0 2 32.595916894842006 34.0 31.0 34.0 31.0 34.0 3 32.4467133501073 34.0 31.0 34.0 30.0 34.0 4 36.069595019610745 37.0 35.0 37.0 35.0 37.0 5 36.113807074668834 37.0 35.0 37.0 35.0 37.0 6 36.13463424110116 37.0 36.0 37.0 35.0 37.0 7 36.25407477984163 37.0 37.0 37.0 35.0 37.0 8 36.01569322134241 37.0 37.0 37.0 35.0 37.0 9 37.79912399171169 39.0 38.0 39.0 35.0 39.0 10 37.69459039443499 39.0 38.0 39.0 35.0 39.0 11 37.69687060608303 39.0 38.0 39.0 35.0 39.0 12 37.627599348775256 39.0 37.0 39.0 35.0 39.0 13 37.57117220454377 39.0 37.0 39.0 35.0 39.0 14 38.97994523791904 41.0 38.0 41.0 35.0 41.0 15 39.07754107156072 41.0 39.0 41.0 35.0 41.0 16 39.13245578331976 41.0 39.0 41.0 35.0 41.0 17 39.101809368756015 41.0 39.0 41.0 35.0 41.0 18 38.44572818767113 39.0 38.0 40.0 35.0 41.0 19 37.756456745356324 37.0 37.0 40.0 35.0 41.0 20 36.94798064826463 36.0 35.0 40.0 34.0 41.0 21 36.88651668763413 36.0 35.0 40.0 34.0 41.0 22 36.89626193295345 36.0 35.0 40.0 34.0 41.0 23 36.914443498852954 36.0 35.0 40.0 34.0 41.0 24 36.74447291497077 35.0 35.0 40.0 34.0 41.0 25 36.648051875971284 35.0 35.0 40.0 34.0 41.0 26 36.504167283356765 35.0 35.0 40.0 33.0 41.0 27 36.43700048101828 35.0 35.0 40.0 33.0 41.0 28 36.288245578331974 35.0 35.0 40.0 33.0 41.0 29 36.02666413823725 35.0 35.0 40.0 33.0 41.0 30 35.54086342781026 35.0 35.0 40.0 31.0 41.0 31 34.90660382594539 35.0 35.0 40.0 25.0 41.0 32 33.915017020646786 35.0 34.0 40.0 18.0 41.0 33 32.76256197735514 35.0 33.0 40.0 12.0 41.0 34 31.809109746170353 35.0 30.0 40.0 8.0 41.0 35 31.251008288314956 35.0 25.0 40.0 7.0 41.0 36 30.921779027603048 35.0 23.0 40.0 7.0 41.0 37 30.753431880411455 35.0 23.0 40.0 7.0 41.0 38 30.60988955080293 35.0 23.0 40.0 7.0 41.0 39 30.502039702508696 35.0 23.0 40.0 7.0 41.0 40 30.354098830755568 35.0 22.0 40.0 7.0 41.0 41 30.18003496632872 35.0 22.0 40.0 7.0 41.0 42 30.050044401687263 35.0 21.0 40.0 7.0 41.0 43 29.898153629837935 35.0 20.0 40.0 7.0 41.0 44 29.79313901428254 35.0 20.0 40.0 7.0 41.0 45 29.73594871605121 35.0 20.0 40.0 7.0 41.0 46 29.654170983497373 35.0 20.0 40.0 7.0 41.0 47 29.692661696144455 35.0 20.0 40.0 7.0 41.0 48 29.654739880115443 35.0 20.0 40.0 7.0 41.0 49 29.608011729445717 35.0 20.0 40.0 7.0 41.0 50 29.502705727817656 35.0 20.0 40.0 7.0 41.0 51 28.87444035373344 35.0 20.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 4.0 10 2.0 11 1.0 12 3.0 13 5.0 14 4.0 15 16.0 16 20.0 17 42.0 18 105.0 19 196.0 20 334.0 21 523.0 22 842.0 23 1469.0 24 3006.0 25 6451.0 26 11272.0 27 13468.0 28 12245.0 29 9364.0 30 7148.0 31 6099.0 32 5869.0 33 6310.0 34 10155.0 35 16036.0 36 15340.0 37 13747.0 38 25137.0 39 50926.0 40 64.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.49115666395323 13.085084733219862 14.12667431362392 46.29708428920299 2 58.0829571523718 14.900003700140605 15.39767261155924 11.619366535928364 3 19.791127062828387 15.00314511951454 53.7519425738178 11.453785243839267 4 19.200029601124843 16.439724709538964 52.130355953526234 12.22988973580996 5 16.294956708354917 19.048786353881447 51.49855694516392 13.157699992599719 6 16.454525271960335 21.823429290313033 51.374139717309255 10.347905720417376 7 49.03842596018649 4.6163879227410645 42.66909642566418 3.6760896914082735 8 48.24937097609709 4.241286168874417 42.99794642196403 4.511396433064457 9 43.60569451639162 6.0483423370088065 44.785114334344705 5.560848812254866 10 24.90610893213942 16.417061348331234 49.34970028861096 9.327129430918376 11 19.543680159846076 16.2246540368534 51.95691186265078 12.274753940649745 12 19.476152593798567 13.791811588840375 54.56366091911493 12.168374898246133 13 15.698771553319027 16.51048989861615 55.040516539628506 12.750222008436321 14 11.645267520165767 19.40723747502405 54.390679345815144 14.556815658995042 15 11.531025678975801 16.588655368904018 59.14952268186191 12.73079627025827 16 12.042107600088803 16.17932731443795 58.1375342263006 13.641030859172648 17 12.574465329682527 15.688133649078665 54.52388440760749 17.21351661363132 18 13.894953008214312 17.098812254865685 55.194072374750235 13.812162362169763 19 15.661307629689928 17.645970546880783 53.34538962480574 13.34733219862355 20 16.97300747428402 15.757973803004512 54.23758602826907 13.031432694442389 21 14.898153629837935 17.28520683785984 54.100680825871386 13.715958706430845 22 12.97870569081625 17.239880115444386 53.32180122844669 16.45961296529268 23 13.622067638570265 17.018334196699474 54.376803818545106 14.982794346185155 24 14.14101235846962 15.405072892769924 55.578886997705915 14.87502775105454 25 13.037445422926073 16.846740176126694 54.03731591800488 16.07849848294235 26 12.075408865536891 18.348072226744616 54.43785613853327 15.13866276918523 27 13.993931769407236 16.970232368830015 54.847646710575006 14.188189151187744 28 11.635092133501072 16.93184341004958 55.79349515281581 15.639569303633538 29 12.414434248501443 16.307444682897952 55.155683415969804 16.1224376526308 30 13.000444016872642 16.384222600458816 53.547047287796936 17.068286094871603 31 13.58876637312218 17.908680529860135 50.536057870199066 17.96649522681862 32 14.178938799674388 19.512691482276328 49.27662251165545 17.031747206393845 33 14.116498926959226 21.526030489158586 46.10143935469548 18.25603122918671 34 13.478224672537555 21.82204173758603 45.021923333086654 19.67781025678976 35 14.259879375416265 21.660160586102272 43.79810182786946 20.281858210612004 36 14.858377118330496 25.08972840967957 41.430474358025606 18.62142011396433 37 15.083623177680753 25.19795752238585 41.976707614889364 17.74171168504403 38 14.944867904980388 25.206282838747875 39.73534744320284 20.113501813068897 39 15.983219862354769 23.41726485606453 40.29638126248798 20.303134019092724 40 16.517427662251166 22.60785909864575 41.89484200399615 18.979871235106934 41 13.551764967068749 24.51250647524606 41.24176718715311 20.69396137053208 42 15.430511359431659 25.09712869089025 40.284818323096275 19.18754162658181 43 16.947569007622292 24.06663953230223 39.72008436320581 19.26570709686968 44 15.389347295197217 24.51713165100274 38.836213276104495 21.25730777769555 45 15.768611707244876 22.82524235920965 38.7899615185377 22.61618441500777 46 15.595167616369421 23.499130466957745 40.50451417153852 20.401187745134315 47 14.713146599570784 22.44459039443499 42.80600162806187 20.03626137793236 48 14.551727965662694 20.96592170502479 43.02893509953378 21.453415229778734 49 14.668282394731 21.16665433286465 43.33188411159624 20.83317916080811 50 14.157662991193664 20.47611559239251 43.36287278916599 22.003348627247835 51 13.81493746762377 20.486290979057202 41.130300451417156 24.568471101901874 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 89.0 1 161.5 2 234.0 3 13721.5 4 27209.0 5 17865.5 6 8522.0 7 8031.5 8 7541.0 9 7347.0 10 7153.0 11 6776.5 12 6400.0 13 5935.0 14 5470.0 15 4938.5 16 4407.0 17 4074.0 18 3741.0 19 3470.0 20 3199.0 21 3013.5 22 2828.0 23 2549.0 24 2270.0 25 2088.5 26 1999.0 27 2091.0 28 2091.0 29 2091.0 30 2416.5 31 2742.0 32 2826.0 33 2910.0 34 3161.5 35 3413.0 36 3817.5 37 4222.0 38 4338.5 39 4455.0 40 5055.0 41 5655.0 42 6560.0 43 7465.0 44 8506.0 45 9547.0 46 11120.5 47 12694.0 48 14475.5 49 16257.0 50 15512.0 51 14767.0 52 12469.5 53 10172.0 54 9053.5 55 7935.0 56 6982.5 57 6030.0 58 5698.0 59 5366.0 60 5503.5 61 5641.0 62 4965.5 63 4290.0 64 3646.0 65 3002.0 66 2340.5 67 1679.0 68 1530.0 69 1381.0 70 991.5 71 602.0 72 480.0 73 358.0 74 311.5 75 179.5 76 94.0 77 70.5 78 47.0 79 39.0 80 31.0 81 20.5 82 10.0 83 11.5 84 13.0 85 7.0 86 1.0 87 6.5 88 12.0 89 6.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 216208.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.53485532450233 #Duplication Level Percentage of deduplicated Percentage of total 1 80.68257998984257 36.73869607045068 2 7.92280345352971 7.215274180418856 3 2.8176739461655664 3.8490712647080585 4 1.3743016759776536 2.5031451195145418 5 0.9537836465210767 2.171520017760675 6 0.808532249873032 2.2089839413897727 7 0.6307770441848654 2.010563901428254 8 0.5942102590147282 2.1645822541256567 9 0.4966988318943626 2.0355398505143194 >10 3.6201117318435756 26.71594020572782 >50 0.07211782630777044 2.1511692444312884 >100 0.02336211274758761 1.9758750832531635 >500 0.002031488065007618 0.6341115962406572 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.001015744032503809 7.625527270036262 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16487 7.625527270036262 No Hit GCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 713 0.32977503145119513 TruSeq Adapter, Index 13 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 658 0.304336564789462 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGCT 366 0.1692814326944424 TruSeq Adapter, Index 16 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 299 0.13829275512469474 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 270 0.12487974543032634 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 253 0.11701694664397247 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 225 0.10406645452527197 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA 221 0.10221638422260046 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.250351513357507E-4 0.0 0.0 0.1785317842077999 0.0 2 9.250351513357507E-4 0.0 0.0 1.0143010434396507 0.0 3 9.250351513357507E-4 0.0 0.0 1.4546177754754681 0.0 4 9.250351513357507E-4 0.0 0.0 1.907422482054318 0.0 5 9.250351513357507E-4 0.0 0.0 3.151132243025235 0.0 6 9.250351513357507E-4 0.0 0.0 3.8268704210760007 0.0 7 9.250351513357507E-4 0.0 0.0 4.499370976097092 0.0 8 9.250351513357507E-4 0.0 0.0 5.620513579516022 0.0 9 9.250351513357507E-4 0.0 0.0 6.063605417005847 0.0 10 9.250351513357507E-4 0.0 0.0 6.889661807148672 0.0 11 9.250351513357507E-4 0.0 0.0 8.099607785095834 0.0 12 9.250351513357507E-4 0.0 0.0 9.085695256419744 0.0 13 9.250351513357507E-4 0.0 0.0 9.526011988455561 0.0 14 9.250351513357507E-4 0.0 0.0 9.679105306001627 0.0 15 0.0013875527270036261 0.0 0.0 10.022755864722859 0.0 16 0.0013875527270036261 0.0 0.0 10.706356841559979 0.0 17 0.0013875527270036261 0.0 0.0 11.430659365055872 0.0 18 0.0013875527270036261 0.0 0.0 12.259490860652704 0.0 19 0.0013875527270036261 0.0 0.0 12.663731221786428 0.0 20 0.0013875527270036261 0.0 0.0 13.134574113816326 0.0 21 0.0013875527270036261 0.0 0.0 13.710871013098497 0.0 22 0.0013875527270036261 0.0 0.0 14.307981203285724 0.0 23 0.0013875527270036261 0.0 0.0 14.890753348627248 0.0 24 0.0013875527270036261 0.0 0.0 15.32783245763339 0.0 25 0.0013875527270036261 0.0 0.0 15.705246799378376 0.0 26 0.0013875527270036261 0.0 0.0 16.103474432028417 0.0 27 0.0013875527270036261 0.0 0.0 16.49060164286243 0.0 28 0.0013875527270036261 0.0 0.0 16.856915562791386 0.0 29 0.0013875527270036261 0.0 0.0 17.238030045141716 0.0 30 0.0013875527270036261 0.0 0.0 17.656145933545474 0.0 31 0.0013875527270036261 0.0 0.0 18.05761118922519 0.0 32 0.0013875527270036261 0.0 0.0 18.448901058240214 0.0 33 0.0013875527270036261 0.0 0.0 18.809664767261157 0.0 34 0.0013875527270036261 0.0 0.0 19.16580330052542 0.0 35 0.0013875527270036261 0.0 0.0 19.532579738030044 0.0 36 0.0013875527270036261 0.0 0.0 19.951158144009472 0.0 37 0.0013875527270036261 0.0 0.0 20.33504773181381 0.0 38 0.0013875527270036261 0.0 0.0 20.685636054170057 0.0 39 0.0013875527270036261 0.0 0.0 21.042237105009992 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGATTC 70 0.0 45.0 43 CGGGTAG 20 7.0205715E-4 45.0 6 TCGTTCC 20 7.0205715E-4 45.0 13 CAACGAG 20 7.0205715E-4 45.0 14 CTATCCA 20 7.0205715E-4 45.0 28 GAGTCCA 20 7.0205715E-4 45.0 36 ATAATAC 20 7.0205715E-4 45.0 23 GCTATCC 20 7.0205715E-4 45.0 27 ATGCTTT 70 0.0 45.0 38 CGACAGG 20 7.0205715E-4 45.0 2 CCGCTAT 20 7.0205715E-4 45.0 25 CGTTCCT 20 7.0205715E-4 45.0 14 GGCCCGC 20 7.0205715E-4 45.0 22 TATGAGG 20 7.0205715E-4 45.0 2 TATTGCG 20 7.0205715E-4 45.0 1 CAGGGCG 20 7.0205715E-4 45.0 5 AACGGGA 20 7.0205715E-4 45.0 4 CGCTATC 20 7.0205715E-4 45.0 26 CTACGAA 70 0.0 45.0 11 CGCTAGG 20 7.0205715E-4 45.0 2 >>END_MODULE