##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935694.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 270437 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31313392768001 33.0 31.0 34.0 30.0 34.0 2 32.51746987283545 34.0 31.0 34.0 30.0 34.0 3 32.37913820963848 34.0 31.0 34.0 30.0 34.0 4 36.004026815857294 37.0 35.0 37.0 35.0 37.0 5 36.04543387184446 37.0 35.0 37.0 35.0 37.0 6 36.06093470937778 37.0 35.0 37.0 35.0 37.0 7 36.20396617326771 37.0 37.0 37.0 35.0 37.0 8 35.93739392168971 37.0 37.0 37.0 35.0 37.0 9 37.7691625036515 39.0 38.0 39.0 35.0 39.0 10 37.61650217980528 39.0 37.0 39.0 35.0 39.0 11 37.62676704740846 39.0 37.0 39.0 35.0 39.0 12 37.50282320836276 39.0 37.0 39.0 35.0 39.0 13 37.422150075618354 39.0 37.0 39.0 35.0 39.0 14 38.80617666961252 41.0 38.0 41.0 35.0 41.0 15 38.90009872909402 41.0 38.0 41.0 35.0 41.0 16 38.989365360509105 41.0 38.0 41.0 35.0 41.0 17 38.93507175423481 41.0 38.0 41.0 35.0 41.0 18 38.31293055314177 39.0 38.0 40.0 35.0 41.0 19 37.64892377892078 37.0 37.0 40.0 35.0 41.0 20 36.83816563561938 36.0 35.0 40.0 34.0 41.0 21 36.821145035627524 36.0 35.0 40.0 34.0 41.0 22 36.801798570461884 35.0 35.0 40.0 34.0 41.0 23 36.81836804875073 35.0 35.0 40.0 34.0 41.0 24 36.669679074978646 35.0 35.0 40.0 34.0 41.0 25 36.59322503947315 35.0 35.0 40.0 33.0 41.0 26 36.44024671180349 35.0 35.0 40.0 33.0 41.0 27 36.321246722896646 35.0 35.0 40.0 33.0 41.0 28 36.1906543853097 35.0 35.0 40.0 33.0 41.0 29 35.95970225967601 35.0 35.0 40.0 33.0 41.0 30 35.40972574019088 35.0 35.0 40.0 31.0 41.0 31 34.80963403676272 35.0 35.0 40.0 25.0 41.0 32 33.835303601208416 35.0 34.0 40.0 18.0 41.0 33 32.73968059104339 35.0 33.0 40.0 12.0 41.0 34 31.84406349722856 35.0 31.0 40.0 8.0 41.0 35 31.30485473511391 35.0 27.0 40.0 7.0 41.0 36 30.96406926567001 35.0 24.0 40.0 7.0 41.0 37 30.79848541434789 35.0 23.0 40.0 7.0 41.0 38 30.680472716381264 35.0 23.0 40.0 7.0 41.0 39 30.565222214415925 35.0 23.0 40.0 7.0 41.0 40 30.42929037077027 35.0 23.0 40.0 7.0 41.0 41 30.279861853222748 35.0 22.0 40.0 7.0 41.0 42 30.169444269829942 35.0 22.0 40.0 7.0 41.0 43 30.063863302728546 35.0 21.0 40.0 7.0 41.0 44 29.955124483706 35.0 21.0 40.0 7.0 41.0 45 29.918480089632705 35.0 22.0 40.0 7.0 41.0 46 29.89674489807238 35.0 22.0 40.0 7.0 41.0 47 29.90220642885404 35.0 22.0 40.0 7.0 41.0 48 29.905053672389503 35.0 22.0 40.0 7.0 41.0 49 29.876019183765536 35.0 22.0 40.0 7.0 41.0 50 29.734307805514778 35.0 20.0 40.0 7.0 41.0 51 29.104970843486655 35.0 20.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 4.0 10 8.0 11 4.0 12 7.0 13 6.0 14 1.0 15 22.0 16 31.0 17 63.0 18 132.0 19 245.0 20 410.0 21 760.0 22 1121.0 23 2029.0 24 3752.0 25 7681.0 26 13244.0 27 16564.0 28 14717.0 29 11694.0 30 9082.0 31 7785.0 32 7313.0 33 8322.0 34 13909.0 35 21647.0 36 19950.0 37 17966.0 38 32579.0 39 59345.0 40 42.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.595843024438224 13.268894419032899 14.982417346738796 45.15284520979008 2 56.26929747039051 16.986950750082276 15.072271915455357 11.671479864071854 3 20.025366351497762 16.572066692057668 52.507977828477614 10.894589127966956 4 19.24366858085247 15.268620787835985 53.60657010690105 11.88114052441049 5 17.390371879587484 18.59102119902232 50.94125434019753 13.077352581192661 6 15.958245358438381 22.469928301230972 51.81243690767165 9.759389432658992 7 48.86646427818679 4.026815857297633 43.30509508684093 3.8016247776746526 8 48.57841197765099 4.7242056375422 42.160651094339904 4.536731290466911 9 44.737961151765475 5.332110620957931 43.6123755255383 6.317552701738298 10 26.41798274644372 14.35417490949833 48.68379696565189 10.54404537840606 11 20.87732078081032 15.591061873929974 50.46239974559694 13.06921759966277 12 18.831372926041926 13.10212729767007 54.546160473603834 13.520339302684173 13 15.47199532608334 16.430444059059965 55.57967289978812 12.517887715068573 14 12.276056900498082 19.677780777038645 53.89610149498775 14.15006082747553 15 10.936743123167318 16.69483095878153 59.223035309517556 13.145390608533598 16 12.538594940781032 16.023325210677534 56.45936022067987 14.978719627861572 17 12.217263170350211 16.346136068659245 53.995200360897364 17.441400400093183 18 13.268894419032899 17.3149384144921 55.18216812048647 14.23399904598853 19 14.277262356852058 17.189955516441906 53.38914423692024 15.143637889785792 20 15.794066640289605 16.83460473234062 54.115376224407164 13.255952402962611 21 14.356393540824666 18.016765457389337 54.316162359440455 13.310678642345536 22 12.581488479756839 16.571327148282226 53.906455107843975 16.940729264116968 23 13.498892533196273 16.96069694605398 54.14421843164951 15.396192089100232 24 14.837466766751591 15.828455425847796 53.89573172310001 15.438346084300594 25 13.270003734696065 17.620000221863133 52.92286188650222 16.187134156938583 26 13.056645355480203 17.328250202450107 54.036614812322284 15.578489629747407 27 14.187038016247778 17.31345932694121 54.34167661969332 14.157826037117701 28 11.386755510525557 17.69580345884624 55.82483166134812 15.09260936928009 29 14.376361222761677 15.513040005620532 55.0246452963167 15.085953475301087 30 14.540539940910453 16.73254769132922 54.065087247676914 14.66182512008342 31 15.862474439518262 17.455081959938916 51.02186461172102 15.660578988821797 32 16.526214977980082 18.525201803007725 49.96098906584528 14.987594153166912 33 16.410846149010673 19.593842558525644 46.80313714469544 17.19217414776824 34 15.128847014276891 19.917762732170523 45.886102863143726 19.067287390408858 35 16.514012505685244 20.17549373791308 44.66141837100693 18.64907538539475 36 18.430540199750777 21.879772368425918 42.265666310453085 17.424021121370224 37 15.975994409049058 23.023107045263778 44.40516645281526 16.595732092871906 38 15.917200678901185 24.308803898874785 41.23363297181968 18.540362450404345 39 18.108099113656788 22.41002525541993 40.84980975236377 18.632065878559516 40 17.693584827519903 22.29576574211369 41.34382499436098 18.666824436005427 41 15.771510555138535 23.771525346014045 39.376638551677466 21.080325547169952 42 16.2910400573886 23.558536738685902 40.875324012616616 19.275099191308882 43 17.56453443870476 22.272839885074898 40.75182020211731 19.410805474103025 44 16.662660804549674 22.871500571297567 40.89344283511502 19.572395789037742 45 16.634188369195044 22.42518590281655 40.25188860991654 20.688737118071863 46 18.52779020622178 22.182615544470615 41.64851702984429 17.641077219463313 47 15.542251984750607 20.979377821821718 44.6987653316669 18.77960486176078 48 15.748954469987464 20.67801373332791 43.69927191915308 19.87375987753155 49 16.086925975365794 19.23442428365941 45.5762340212323 19.102415719742492 50 15.419487718026751 19.860817861461264 44.621113235245176 20.09858118526681 51 15.232013370951462 19.941797904872484 41.857068374519756 22.969120349656297 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 117.0 1 189.0 2 261.0 3 17359.5 4 34458.0 5 22433.5 6 10409.0 7 9917.5 8 9426.0 9 9064.5 10 8703.0 11 8366.0 12 8029.0 13 7515.5 14 7002.0 15 6223.5 16 5445.0 17 4895.5 18 4346.0 19 3855.0 20 3364.0 21 3003.0 22 2642.0 23 2435.0 24 2228.0 25 2225.5 26 2286.0 27 2349.0 28 2371.5 29 2394.0 30 2678.5 31 2963.0 32 2881.0 33 2799.0 34 3238.5 35 3678.0 36 3911.5 37 4145.0 38 4740.5 39 5336.0 40 6289.5 41 7243.0 42 8591.0 43 9939.0 44 11543.0 45 13147.0 46 16882.5 47 20618.0 48 21051.5 49 21485.0 50 20954.5 51 20424.0 52 16825.0 53 13226.0 54 11249.0 55 9272.0 56 8300.0 57 7328.0 58 6750.5 59 6173.0 60 5748.0 61 5323.0 62 4852.5 63 4382.0 64 4079.0 65 3776.0 66 3068.5 67 2361.0 68 1887.0 69 1413.0 70 1100.5 71 788.0 72 687.0 73 586.0 74 467.0 75 260.5 76 173.0 77 113.0 78 53.0 79 35.0 80 17.0 81 27.5 82 38.0 83 20.5 84 3.0 85 2.0 86 1.0 87 1.5 88 2.0 89 1.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 270437.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.720009481703435 #Duplication Level Percentage of deduplicated Percentage of total 1 77.08442607773253 30.61794134699204 2 9.855627776697414 7.8293125747712216 3 3.3560957772769338 3.9991246828483393 4 1.6111959705402488 2.559868769069642 5 1.0037693425607113 1.9934863901977338 6 0.8222269734791467 1.9595317909622416 7 0.591987092504134 1.6459613049117174 8 0.5451436618543304 1.7322489134195627 9 0.5082687752845667 1.8169596516201105 >10 4.484723633163596 30.22169387531691 >50 0.0936808932642101 2.5647231565175304 >100 0.035877788909697485 2.567889970107921 >500 0.005979631484949581 2.0041971510184067 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 9.96605247491597E-4 8.487060422246621 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21440 7.927909272769629 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGC 986 0.36459508129434953 No Hit GCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 976 0.3608973624171249 Illumina PCR Primer Index 5 (95% over 23bp) GAATCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTC 883 0.3265085768589357 No Hit CCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 880 0.32539926119576834 Illumina PCR Primer Index 5 (95% over 23bp) GAATGATACCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCG 823 0.30432226359558784 No Hit CTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGCT 515 0.19043252217706896 Illumina PCR Primer Index 5 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 384 0.14199240488542617 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 376 0.13903422978364646 No Hit CGCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTG 338 0.12498289805019283 Illumina PCR Primer Index 5 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 337 0.12461312616247039 Illumina PCR Primer Index 5 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 322 0.11906654784663341 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA 295 0.10908270687812688 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0011093156631673921 0.0 0.0 0.20189545069646536 0.0 2 0.0011093156631673921 0.0 0.0 1.13150197643074 0.0 3 0.0011093156631673921 0.0 0.0 1.5878004858802606 0.0 4 0.0011093156631673921 0.0 0.0 2.117313829098829 0.0 5 0.0011093156631673921 0.0 0.0 3.688844351919301 0.0 6 0.0011093156631673921 0.0 0.0 4.3673757658900225 0.0 7 0.0011093156631673921 0.0 0.0 5.148703764647589 0.0 8 0.0011093156631673921 0.0 0.0 6.305720001331179 0.0 9 0.0011093156631673921 0.0 0.0 6.731697215987458 0.0 10 0.0011093156631673921 0.0 0.0 7.8990670655272766 0.0 11 0.0011093156631673921 0.0 0.0 9.19474776010679 0.0 12 0.0011093156631673921 0.0 0.0 10.61726021217511 0.0 13 0.0011093156631673921 0.0 0.0 11.098333438102035 0.0 14 0.0011093156631673921 0.0 0.0 11.27323554099476 0.0 15 0.0011093156631673921 0.0 0.0 11.66630305764374 0.0 16 0.0011093156631673921 0.0 0.0 12.311924773607162 0.0 17 0.0011093156631673921 0.0 0.0 13.059973302469706 0.0 18 0.0011093156631673921 0.0 0.0 13.955930586421237 0.0 19 0.0011093156631673921 0.0 0.0 14.52353043407522 0.0 20 0.0011093156631673921 0.0 0.0 15.052304233518342 0.0 21 0.0011093156631673921 0.0 0.0 15.653183551067347 0.0 22 0.0011093156631673921 0.0 0.0 16.227439292700332 0.0 23 0.0011093156631673921 0.0 0.0 16.761759670459295 0.0 24 0.0011093156631673921 0.0 0.0 17.22027681123515 0.0 25 0.0011093156631673921 0.0 0.0 17.60779774956829 0.0 26 0.0011093156631673921 0.0 0.0 17.959820586680078 0.0 27 0.0011093156631673921 0.0 0.0 18.328483158739374 0.0 28 0.00184885943861232 0.0 0.0 18.735602007121805 0.0 29 0.00184885943861232 0.0 0.0 19.09206210688626 0.0 30 0.00184885943861232 0.0 0.0 19.506206621135423 0.0 31 0.002588403214057248 0.0 0.0 19.921090679160027 0.0 32 0.002958175101779712 0.0 0.0 20.308241845605448 0.0 33 0.002958175101779712 0.0 0.0 20.67357647067524 0.0 34 0.002958175101779712 0.0 0.0 21.03928086763276 0.0 35 0.00369771887722464 0.0 0.0 21.432718156169457 0.0 36 0.00369771887722464 0.0 0.0 21.817650691288545 0.0 37 0.00369771887722464 0.0 0.0 22.172261931614386 0.0 38 0.004067490764947104 0.0 0.0 22.538336100459627 0.0 39 0.004067490764947104 0.0 0.0 22.897384603438137 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 30 2.1593241E-6 45.000004 25 ATGGGCG 30 2.1593241E-6 45.000004 5 CCTAGGG 35 1.2073178E-7 45.000004 3 CGTAAGG 35 1.2073178E-7 45.000004 2 TTTGCGG 30 2.1593241E-6 45.000004 2 CGGTCTA 30 2.1593241E-6 45.000004 31 TAGTGAG 30 2.1593241E-6 45.000004 1 CGCCGGT 35 1.2073178E-7 45.000004 28 TATACGG 30 2.1593241E-6 45.000004 2 CGGGTCT 20 7.02371E-4 45.0 6 CTATGCG 20 7.02371E-4 45.0 27 CGACGTT 20 7.02371E-4 45.0 27 ACGCACG 20 7.02371E-4 45.0 1 GACGTTT 20 7.02371E-4 45.0 28 TTTCGAC 20 7.02371E-4 45.0 24 TCGATCT 20 7.02371E-4 45.0 13 AGAGTGC 20 7.02371E-4 45.0 1 CGCCTAG 20 7.02371E-4 45.0 1 GACGGCC 20 7.02371E-4 45.0 35 ATTGGGC 20 7.02371E-4 45.0 4 >>END_MODULE