SRR2935685.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935685.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	301881
Sequences flagged as poor quality	0
Sequence length	51
%GC	34

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22406	7.422129912117689	No Hit
GCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC	1052	0.34848168649235955	No Hit
CCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC	863	0.28587423521188815	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGC	771	0.2553986504616057	No Hit
CTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGCT	680	0.22525432206730467	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCG	654	0.2166416568117901	No Hit
GAATCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTC	622	0.20604145342038752	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	437	0.1447590275638414	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	399	0.13217128603655082	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	336	0.11130213560972702	No Hit
CGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTG	333	0.11030836654178301	No Hit
TCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC	323	0.10699580298196973	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATATGG	20	7.025014E-4	45.0	2
ACGCCAT	25	3.883949E-5	45.0	29
ATAGGGT	25	3.883949E-5	45.0	4
CAACGTC	20	7.025014E-4	45.0	19
CGCGGGC	20	7.025014E-4	45.0	4
CGTGCCG	20	7.025014E-4	45.0	42
GGGTCGA	20	7.025014E-4	45.0	8
GATTTAG	20	7.025014E-4	45.0	19
GCCGACA	20	7.025014E-4	45.0	40
ACGTCTA	20	7.025014E-4	45.0	21
TATAGAG	40	6.7866495E-9	45.0	1
GGTCTGC	20	7.025014E-4	45.0	8
GTAAGCG	20	7.025014E-4	45.0	1
ATTGCGG	35	1.2079545E-7	45.0	2
CGCCGGT	25	3.883949E-5	45.0	28
GGTTATG	20	7.025014E-4	45.0	1
CGTCACT	20	7.025014E-4	45.0	35
TATGGGC	45	3.8198777E-10	44.999996	4
CGGGCCA	30	2.1601663E-6	44.999996	6
CGTTTTT	11170	0.0	44.496418	1