##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935685.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 301881 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31720114879704 33.0 31.0 34.0 30.0 34.0 2 32.52157307018329 34.0 31.0 34.0 31.0 34.0 3 32.381077311920926 34.0 31.0 34.0 30.0 34.0 4 36.02363182843571 37.0 35.0 37.0 35.0 37.0 5 36.05655208509313 37.0 35.0 37.0 35.0 37.0 6 36.07005740672649 37.0 35.0 37.0 35.0 37.0 7 36.217956744545035 37.0 37.0 37.0 35.0 37.0 8 35.95384936448468 37.0 37.0 37.0 35.0 37.0 9 37.78719429179047 39.0 38.0 39.0 35.0 39.0 10 37.66960159798066 39.0 38.0 39.0 35.0 39.0 11 37.638503251281136 39.0 37.0 39.0 35.0 39.0 12 37.57072488828379 39.0 37.0 39.0 35.0 39.0 13 37.536327228278694 39.0 37.0 39.0 35.0 39.0 14 38.925775388315266 41.0 38.0 41.0 35.0 41.0 15 39.02883917835173 41.0 39.0 41.0 35.0 41.0 16 39.08568608160169 41.0 39.0 41.0 35.0 41.0 17 39.037776474836114 41.0 38.0 41.0 35.0 41.0 18 38.41928773258337 39.0 38.0 40.0 35.0 41.0 19 37.735501737439584 37.0 37.0 40.0 35.0 41.0 20 36.92586151496782 36.0 35.0 40.0 34.0 41.0 21 36.89690639689149 36.0 35.0 40.0 34.0 41.0 22 36.89389858917918 36.0 35.0 40.0 34.0 41.0 23 36.902286000112625 36.0 35.0 40.0 34.0 41.0 24 36.737535651465315 36.0 35.0 40.0 34.0 41.0 25 36.66048873562762 35.0 35.0 40.0 33.0 41.0 26 36.51514338431369 35.0 35.0 40.0 33.0 41.0 27 36.40591822605596 35.0 35.0 40.0 33.0 41.0 28 36.26615785690388 35.0 35.0 40.0 33.0 41.0 29 36.05755910441532 35.0 35.0 40.0 33.0 41.0 30 35.57176834580513 35.0 35.0 40.0 31.0 41.0 31 34.94780062342446 35.0 35.0 40.0 25.0 41.0 32 33.95529364219676 35.0 34.0 40.0 18.0 41.0 33 32.845866417561886 35.0 33.0 40.0 12.0 41.0 34 31.92338040486152 35.0 31.0 40.0 9.0 41.0 35 31.379149399929112 35.0 27.0 40.0 7.0 41.0 36 31.02890542962293 35.0 24.0 40.0 7.0 41.0 37 30.835726660505298 35.0 23.0 40.0 7.0 41.0 38 30.6774457484903 35.0 23.0 40.0 7.0 41.0 39 30.55089588281475 35.0 23.0 40.0 7.0 41.0 40 30.415120527625124 35.0 23.0 40.0 7.0 41.0 41 30.24201920624352 35.0 22.0 40.0 7.0 41.0 42 30.1071415557786 35.0 21.0 40.0 7.0 41.0 43 29.953272978425275 35.0 21.0 40.0 7.0 41.0 44 29.80055054806364 35.0 20.0 40.0 7.0 41.0 45 29.742802627525414 35.0 20.0 40.0 7.0 41.0 46 29.684441882728624 35.0 20.0 40.0 7.0 41.0 47 29.67279822181588 35.0 20.0 40.0 7.0 41.0 48 29.634021352784707 35.0 20.0 40.0 7.0 41.0 49 29.604884043712588 35.0 20.0 40.0 7.0 41.0 50 29.489272262911545 35.0 20.0 39.0 7.0 41.0 51 28.86159778190744 35.0 20.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 7.0 10 7.0 11 9.0 12 5.0 13 2.0 14 11.0 15 24.0 16 21.0 17 61.0 18 148.0 19 288.0 20 504.0 21 790.0 22 1339.0 23 2192.0 24 4234.0 25 8497.0 26 14871.0 27 18699.0 28 16889.0 29 13220.0 30 10164.0 31 8569.0 32 8443.0 33 9014.0 34 14262.0 35 22582.0 36 21707.0 37 20570.0 38 37593.0 39 67089.0 40 67.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.01826216290525 13.353937478675373 14.879704254325379 44.748096104093996 2 56.96781181988929 16.25176808080005 15.026119563669127 11.754300535641528 3 19.575263100360736 17.113365862707493 52.2586714632587 11.052699573673069 4 18.909769081194245 15.595880495957015 52.99439182989324 12.499958592955503 5 16.689026470695406 18.337689354414486 51.282127725825745 13.691156449064367 6 16.37897052149688 22.446593194006912 51.3165783868478 9.857857897648412 7 49.526469039124684 4.24273140740888 42.748632739390686 3.482166814075745 8 48.84341843309119 4.620032396871615 42.08711379649597 4.44943537354123 9 45.034964108373835 5.3004329520572675 43.53106025221859 6.133542687350314 10 25.78002590424704 16.785090813929994 48.00103351983066 9.433849761992308 11 19.87670638430375 16.003325813814055 51.598477545787915 12.521490256094289 12 18.332389252718787 13.942580023254198 54.12894484912929 13.596085874897726 13 15.383545171772983 16.17193529900855 55.695456156565 12.749063372653463 14 12.27304798910829 19.467604784666808 53.958679082154895 14.300668144070015 15 11.698980724192646 16.613831277887645 58.6320437523395 13.05514424558021 16 12.458551548457836 16.574411771525867 56.6236364660247 14.343400213991606 17 12.324723980641378 16.345182373186788 54.01234261182386 17.31775103434797 18 13.865066035954566 16.708570595698305 54.87460290644327 14.551760461903863 19 14.690225618704059 17.356176771641806 53.44788178123168 14.505715828422458 20 16.53565477787605 16.668157320268584 53.335917132909984 13.460270768945378 21 15.071832940794552 17.68842689669108 53.529039588447105 13.710700574067264 22 13.690162679996423 16.245805466392387 53.064618177361275 16.999413676249915 23 13.518571887598094 17.57116214667369 53.66286715626356 15.247398809464658 24 14.673994057260975 16.05003296000742 53.79437592958814 15.481597053143457 25 13.430457696907059 18.186636456087 52.719780310784714 15.663125536221226 26 13.870366137650267 17.846104922138192 53.44721926851972 14.836309671691824 27 14.779664834819018 18.657351737936473 52.470675531086755 14.092307896157758 28 11.94907927295855 19.332120935070442 53.90899062875769 14.80980916321332 29 14.504390802998532 18.10713493065148 52.107618564931215 15.280855701418773 30 14.043944468184483 18.623563589626375 51.31591587413583 16.016576068053308 31 14.903885968312016 20.54153789075828 48.1795806957046 16.374995445225103 32 15.589586625193371 21.692984984149383 46.70283986073983 16.014588529917418 33 14.514328493677972 22.694372948280943 44.056101576448995 18.735196981592082 34 15.058251430199318 22.678803899549823 42.925523633484715 19.33742103676614 35 15.793971796833853 23.804081740818404 39.650392041897305 20.751554420450443 36 16.82384780757981 26.720131442522053 38.746724702780234 17.709296047117903 37 16.034132654920317 27.820565057092033 39.011729787565294 17.13357250042235 38 15.518366508657385 27.559866304934726 37.32563493562033 19.596132250787562 39 17.61422547295126 24.87635856512997 38.27037806287908 19.239037899039687 40 17.338951441130774 23.382061143298188 39.29859779184513 19.980389623725905 41 15.751239726912262 25.44280693385804 37.427661893262574 21.378291445967122 42 17.223342972893292 26.352768143738757 37.06162361990321 19.362265263464742 43 17.85273004925782 26.408750467899605 37.2302331050977 18.508286377744874 44 16.433959076589783 26.10432587675276 37.299796939853785 20.161918106803675 45 16.835110523683174 23.757705850981015 37.46675014326837 21.940433482067437 46 17.854386331037727 23.93592177049897 37.9470718594413 20.262620039021996 47 15.560767322222995 24.034304908225426 40.79422023910084 19.610707530450743 48 15.288805853962323 23.19357627674481 40.334436416998756 21.183181452294118 49 15.218910762850262 22.377691871962792 42.063594595221296 20.339802769965647 50 14.963843368744637 21.656546784991438 41.57267267565696 21.80693717060696 51 14.641530934374803 21.35344721926852 39.80475750378461 24.200264342572073 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 106.0 1 181.0 2 256.0 3 18484.5 4 36713.0 5 24143.5 6 11574.0 7 11094.0 8 10614.0 9 10222.5 10 9831.0 11 9318.0 12 8805.0 13 8100.0 14 7395.0 15 6715.5 16 6036.0 17 5520.5 18 5005.0 19 4647.0 20 4289.0 21 3871.5 22 3454.0 23 3114.0 24 2774.0 25 2758.5 26 2649.0 27 2555.0 28 2662.0 29 2769.0 30 3083.0 31 3397.0 32 3669.5 33 3942.0 34 4078.5 35 4215.0 36 4556.5 37 4898.0 38 5770.0 39 6642.0 40 7317.5 41 7993.0 42 9138.5 43 10284.0 44 11802.5 45 13321.0 46 16900.5 47 20480.0 48 21630.0 49 22780.0 50 22654.5 51 22529.0 52 18773.0 53 15017.0 54 13191.0 55 11365.0 56 10069.5 57 8774.0 58 8219.5 59 7665.0 60 7709.0 61 7753.0 62 6754.0 63 5755.0 64 4803.0 65 3851.0 66 3058.0 67 2265.0 68 1963.5 69 1662.0 70 1296.5 71 931.0 72 769.0 73 607.0 74 478.0 75 314.0 76 279.0 77 214.0 78 149.0 79 92.0 80 35.0 81 25.5 82 16.0 83 10.0 84 4.0 85 3.0 86 2.0 87 1.5 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 301881.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.00922320801405 #Duplication Level Percentage of deduplicated Percentage of total 1 79.99874363450901 35.206825649718 2 8.721928579283759 7.6769060330011145 3 3.0060634246604176 3.9688354869998235 4 1.4527713732467633 2.5574135854171955 5 0.897438725991454 1.9747790603836828 6 0.6680693471949259 1.7640727811480235 7 0.49666246264296887 1.5300410424247446 8 0.4519334829861187 1.5911393222329053 9 0.4133101046465325 1.63705109845652 >10 3.7636376691445177 27.985006843724 >50 0.09764862131267744 2.933252631576416 >100 0.026493811984059774 2.164044190201067 >500 0.00378483028343711 1.1959542245723263 >1k 7.56966056687422E-4 0.3504578953342861 >5k 0.0 0.0 >10k+ 7.56966056687422E-4 7.4642201548099 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22406 7.422129912117689 No Hit GCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 1052 0.34848168649235955 No Hit CCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 863 0.28587423521188815 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGC 771 0.2553986504616057 No Hit CTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGCT 680 0.22525432206730467 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCG 654 0.2166416568117901 No Hit GAATCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTC 622 0.20604145342038752 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 437 0.1447590275638414 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 399 0.13217128603655082 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 336 0.11130213560972702 No Hit CGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTG 333 0.11030836654178301 No Hit TCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 323 0.10699580298196973 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.937690679439912E-4 0.0 0.0 0.23452950003478193 0.0 2 9.937690679439912E-4 0.0 0.0 1.097783563722129 0.0 3 9.937690679439912E-4 0.0 0.0 1.5370294917533731 0.0 4 9.937690679439912E-4 0.0 0.0 2.0511393562363978 0.0 5 9.937690679439912E-4 0.0 0.0 3.5325177801849073 0.0 6 9.937690679439912E-4 0.0 0.0 4.22053723155813 0.0 7 9.937690679439912E-4 0.0 0.0 4.9284320642902335 0.0 8 9.937690679439912E-4 0.0 0.0 6.024559346232456 0.0 9 9.937690679439912E-4 0.0 0.0 6.415773102646407 0.0 10 9.937690679439912E-4 0.0 0.0 7.4757934417866645 0.0 11 9.937690679439912E-4 0.0 0.0 8.722642365700391 0.0 12 9.937690679439912E-4 0.0 0.0 10.0142108976716 0.0 13 9.937690679439912E-4 0.0 0.0 10.456106876550693 0.0 14 9.937690679439912E-4 0.0 0.0 10.62935395072893 0.0 15 9.937690679439912E-4 0.0 0.0 10.996717249512225 0.0 16 9.937690679439912E-4 0.0 0.0 11.654592372491146 0.0 17 9.937690679439912E-4 0.0 0.0 12.38501263742998 0.0 18 9.937690679439912E-4 0.0 0.0 13.270792133324058 0.0 19 9.937690679439912E-4 0.0 0.0 13.78655827958699 0.0 20 9.937690679439912E-4 0.0 0.0 14.239385718213468 0.0 21 9.937690679439912E-4 0.0 0.0 14.829353288216218 0.0 22 9.937690679439912E-4 0.0 0.0 15.45741533915682 0.0 23 9.937690679439912E-4 0.0 0.0 16.040757782039943 0.0 24 9.937690679439912E-4 0.0 0.0 16.49557275880231 0.0 25 9.937690679439912E-4 0.0 0.0 16.86956118470523 0.0 26 9.937690679439912E-4 0.0 0.0 17.24553714874404 0.0 27 9.937690679439912E-4 0.0 0.0 17.609919140323505 0.0 28 9.937690679439912E-4 0.0 0.0 18.01206435648484 0.0 29 9.937690679439912E-4 0.0 0.0 18.39797801120309 0.0 30 9.937690679439912E-4 0.0 0.0 18.825961223130967 0.0 31 9.937690679439912E-4 0.0 0.0 19.236387848191836 0.0 32 9.937690679439912E-4 0.0 0.0 19.646814473252707 0.0 33 9.937690679439912E-4 0.0 0.0 20.020140386443664 0.0 34 9.937690679439912E-4 0.0 0.0 20.376240969123597 0.0 35 9.937690679439912E-4 0.0 0.0 20.769111007317452 0.0 36 9.937690679439912E-4 0.0 0.0 21.15138084211991 0.0 37 9.937690679439912E-4 0.0 0.0 21.524044242598904 0.0 38 9.937690679439912E-4 0.0 0.0 21.90333277019753 0.0 39 9.937690679439912E-4 0.0 0.0 22.27202109440475 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATATGG 20 7.025014E-4 45.0 2 ACGCCAT 25 3.883949E-5 45.0 29 ATAGGGT 25 3.883949E-5 45.0 4 CAACGTC 20 7.025014E-4 45.0 19 CGCGGGC 20 7.025014E-4 45.0 4 CGTGCCG 20 7.025014E-4 45.0 42 GGGTCGA 20 7.025014E-4 45.0 8 GATTTAG 20 7.025014E-4 45.0 19 GCCGACA 20 7.025014E-4 45.0 40 ACGTCTA 20 7.025014E-4 45.0 21 TATAGAG 40 6.7866495E-9 45.0 1 GGTCTGC 20 7.025014E-4 45.0 8 GTAAGCG 20 7.025014E-4 45.0 1 ATTGCGG 35 1.2079545E-7 45.0 2 CGCCGGT 25 3.883949E-5 45.0 28 GGTTATG 20 7.025014E-4 45.0 1 CGTCACT 20 7.025014E-4 45.0 35 TATGGGC 45 3.8198777E-10 44.999996 4 CGGGCCA 30 2.1601663E-6 44.999996 6 CGTTTTT 11170 0.0 44.496418 1 >>END_MODULE