##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935682.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 792651 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.4652892634968 34.0 31.0 34.0 31.0 34.0 2 32.66018714415298 34.0 31.0 34.0 31.0 34.0 3 32.505364908389694 34.0 31.0 34.0 31.0 34.0 4 36.09870169847764 37.0 35.0 37.0 35.0 37.0 5 36.13130242691929 37.0 35.0 37.0 35.0 37.0 6 36.147136633903195 37.0 37.0 37.0 35.0 37.0 7 36.2746378923385 37.0 37.0 37.0 35.0 37.0 8 36.07262464817429 37.0 37.0 37.0 35.0 37.0 9 37.878011886694146 39.0 38.0 39.0 35.0 39.0 10 37.72266230661413 39.0 38.0 39.0 35.0 39.0 11 37.68890596239707 39.0 38.0 39.0 35.0 39.0 12 37.59326866426712 39.0 37.0 39.0 35.0 39.0 13 37.581032509894015 39.0 37.0 39.0 35.0 39.0 14 38.899684728840306 41.0 39.0 41.0 35.0 41.0 15 39.00749257870109 41.0 39.0 41.0 35.0 41.0 16 39.094605318103426 41.0 39.0 41.0 35.0 41.0 17 39.078530147568095 41.0 39.0 41.0 35.0 41.0 18 38.42932639963868 39.0 38.0 41.0 35.0 41.0 19 37.73946667575011 37.0 37.0 41.0 35.0 41.0 20 36.92286643175874 36.0 35.0 40.0 34.0 41.0 21 36.85873858734803 36.0 35.0 40.0 34.0 41.0 22 36.86897890748892 36.0 35.0 40.0 34.0 41.0 23 36.89298316661431 36.0 35.0 40.0 34.0 41.0 24 36.726889892272894 35.0 35.0 40.0 34.0 41.0 25 36.641466420909076 35.0 35.0 40.0 33.0 41.0 26 36.48829055914898 35.0 35.0 40.0 33.0 41.0 27 36.40164839254603 35.0 35.0 40.0 33.0 41.0 28 36.25180817282764 35.0 35.0 40.0 33.0 41.0 29 35.98187979325075 35.0 35.0 40.0 33.0 41.0 30 35.45632188693384 35.0 35.0 40.0 31.0 41.0 31 34.7993454874844 35.0 35.0 40.0 24.0 41.0 32 33.79816211674495 35.0 34.0 40.0 18.0 41.0 33 32.687202816876535 35.0 33.0 40.0 12.0 41.0 34 31.713431257892818 35.0 30.0 40.0 8.0 41.0 35 31.135847933075212 35.0 25.0 40.0 7.0 41.0 36 30.785884329925782 35.0 23.0 40.0 7.0 41.0 37 30.606421994042776 35.0 23.0 40.0 7.0 41.0 38 30.41329033837086 35.0 22.0 40.0 7.0 41.0 39 30.257936973523027 35.0 22.0 40.0 7.0 41.0 40 30.11724201445529 35.0 21.0 40.0 7.0 41.0 41 29.930620159439652 35.0 21.0 40.0 7.0 41.0 42 29.82936752744903 35.0 20.0 40.0 7.0 41.0 43 29.72813886565462 35.0 20.0 40.0 7.0 41.0 44 29.627539736908172 35.0 20.0 40.0 7.0 41.0 45 29.57816617906241 35.0 20.0 40.0 7.0 41.0 46 29.557573257335196 35.0 20.0 40.0 7.0 41.0 47 29.585638572335114 35.0 20.0 40.0 7.0 41.0 48 29.54309904358917 35.0 20.0 40.0 7.0 41.0 49 29.522165492757846 35.0 20.0 40.0 7.0 41.0 50 29.424295181612084 35.0 20.0 40.0 7.0 41.0 51 28.833134633022603 35.0 20.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 7.0 9 15.0 10 16.0 11 27.0 12 24.0 13 19.0 14 33.0 15 59.0 16 100.0 17 228.0 18 423.0 19 724.0 20 1287.0 21 2026.0 22 3424.0 23 5864.0 24 11763.0 25 24042.0 26 41177.0 27 50212.0 28 45128.0 29 34550.0 30 25936.0 31 21855.0 32 20975.0 33 24913.0 34 40520.0 35 52746.0 36 55671.0 37 53440.0 38 95406.0 39 179854.0 40 185.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.786063475602756 12.87678940668718 14.600372673471679 45.736774444238385 2 58.759908206764386 14.78885411107789 14.99903488420503 11.452202797952694 3 20.811302830627856 15.25564214263276 52.95508363706095 10.977971389678434 4 18.860633494438282 15.805316589520482 52.80798232765744 12.52606758838379 5 16.023697692931695 18.8275798554471 52.420674420394356 12.728048031226857 6 16.934565149100926 21.643699433924894 51.67671522523784 9.745020191736337 7 50.63754413985474 4.084142958250226 41.881609939304944 3.3967029625900933 8 51.33066128725 3.5159231490277563 41.79784041147996 3.355575152242286 9 47.6440451093861 4.873519367287747 43.221543907722314 4.260891615603841 10 27.321229645834045 15.247946448058478 47.689714641122 9.741109264985473 11 20.11238237257002 16.119073842081825 51.08843614655125 12.680107638796898 12 18.429800757205882 14.403186269871608 54.144510005033744 13.02250296788877 13 16.825816153641387 14.432833617821714 55.47271119319852 13.268639035338378 14 13.873066456738211 16.28093574599666 55.824063806139144 14.021933991125982 15 13.207830432308798 16.127021854511 57.474348736076784 13.190798977103416 16 15.819951025104364 15.748545072169215 54.96012747098029 13.471376431746126 17 15.956707302457199 15.739966265102801 53.48734815196096 14.815978280479051 18 16.364579114894195 15.757628514945418 54.38282421898162 13.494968151178766 19 16.58283405937796 16.495153604802113 53.422250145398166 13.499762190421762 20 16.69120457805516 16.96534792739806 53.36787564766839 12.975571846878386 21 16.313484749278057 16.24876521949761 54.90739303930734 12.530356991916996 22 15.274313663894956 15.120652090264189 54.592626515326415 15.012407730514438 23 14.996133228873742 16.252045351611237 54.50835235179164 14.243469067723375 24 14.764126961298226 16.345024481139873 54.086855375190346 14.803993182371562 25 15.569147077339206 16.238041710664593 53.248781620158184 14.944029591838023 26 14.33859289901861 16.295191704798203 53.7429461389691 15.623269257214083 27 14.561894200600264 16.420972155463122 54.484255996649225 14.532877647287393 28 13.52423702234653 16.577661543352622 54.15813516919804 15.739966265102801 29 14.7237561045151 17.039277058882156 53.404209418773206 14.832757417829537 30 15.966169222015742 16.17306986302925 52.84078364879373 15.019977266161275 31 15.94232518472821 17.385457155797443 50.76244147802753 15.909776181446816 32 16.53262280625395 18.73081595809505 49.442314461219375 15.294246774431622 33 17.19117240752866 19.316571858232688 46.53271111750316 16.959544616735485 34 15.930087768765825 20.6480531785111 45.602667504361946 17.819191548361133 35 16.860131381907042 22.74330064555523 43.19946609541904 17.19710187711868 36 18.800203368191045 23.30924959408365 40.797652434678064 17.09289460304724 37 18.23450673751752 24.288369030001856 39.90154557302016 17.57557865946047 38 17.990010736124727 24.18226937201871 40.05886575554689 17.768854136309674 39 17.537604822298842 23.17930589881297 39.720885988915676 19.56220328997251 40 18.862904355132333 22.805749314641627 40.31105745151397 18.02028887871207 41 17.331587293777464 23.645084658948264 39.83304127541629 19.19028677185798 42 17.804430953849803 23.97007005605241 39.98834291510388 18.237156074993912 43 18.04779152489557 23.145747624111998 39.97850251876299 18.827958332229443 44 18.337830899096826 23.11118007799145 39.245771468149286 19.305217554762436 45 18.018648812655254 21.990888802259757 39.474245285756275 20.51621709932871 46 17.613678655549542 22.30641227980536 40.303235598012236 19.776673466632854 47 16.682625770988746 22.578410927381658 42.0077688667522 18.731194434877395 48 16.550789691806354 22.55355761867455 41.76768842782006 19.12796426169903 49 17.67499189428891 21.50833090477398 42.27144102511698 18.54523617582013 50 16.10267318151368 21.5996699682458 42.56135424039079 19.73630260984973 51 16.336067197291115 21.421155085907923 41.295223244530064 20.947554472270898 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 135.0 1 417.0 2 699.0 3 49011.5 4 97324.0 5 63857.5 6 30391.0 7 28929.0 8 27467.0 9 26620.5 10 25774.0 11 24802.5 12 23831.0 13 22198.5 14 20566.0 15 18846.0 16 17126.0 17 15618.5 18 14111.0 19 12836.0 20 11561.0 21 10530.0 22 9499.0 23 8614.0 24 7729.0 25 7352.5 26 7091.5 27 7207.0 28 7297.5 29 7388.0 30 7910.0 31 8432.0 32 9670.0 33 10908.0 34 11473.0 35 12038.0 36 13649.0 37 15260.0 38 16066.5 39 16873.0 40 18173.0 41 19473.0 42 21771.5 43 24070.0 44 27057.0 45 30044.0 46 33859.0 47 37674.0 48 42941.5 49 48209.0 50 48120.5 51 48032.0 52 43999.5 53 39967.0 54 36480.0 55 32993.0 56 30807.0 57 28621.0 58 27676.5 59 26732.0 60 25186.5 61 23641.0 62 21121.5 63 18602.0 64 16636.5 65 14671.0 66 12239.5 67 9808.0 68 8418.5 69 7029.0 70 6024.0 71 5019.0 72 4079.5 73 3140.0 74 2446.5 75 1328.0 76 903.0 77 708.0 78 513.0 79 386.5 80 260.0 81 187.0 82 114.0 83 93.5 84 73.0 85 41.0 86 9.0 87 5.0 88 1.0 89 2.5 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 792651.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.15710678973661 #Duplication Level Percentage of deduplicated Percentage of total 1 80.4069282453996 33.093165324306 2 7.483742804584978 6.160184035904538 3 2.6413868793771464 3.26135525602603 4 1.4095261525973808 2.320480735415079 5 0.9439673572585298 1.9425482664357379 6 0.7468564038183263 1.84430692611297 7 0.6178302108683148 1.77996727766429 8 0.5638429676702967 1.8564916186438727 9 0.49711747469940015 1.8413925293922657 >10 4.562870979257712 31.948564924474205 >50 0.06916874439955692 2.008323999748799 >100 0.053970217114586674 3.5552893678513833 >500 0.002171215631045859 0.6818240758955133 >1k 3.1017366157797986E-4 0.14808386594997106 >5k 0.0 0.0 >10k+ 3.1017366157797986E-4 7.558021796179343 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 59205 7.469239299515171 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1160 0.1463443558388244 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 942 0.1188417096553212 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 845 0.10660429369293674 No Hit GCTGTCTCTTATACACATCTGACGCTGCTCCTTTCGTATGCCGTCTTCTGC 834 0.10521654549101685 TruSeq Adapter, Index 19 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA 794 0.10017018839312634 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.046357097890496E-4 0.0 0.0 0.06055628517468596 0.0 2 5.046357097890496E-4 0.0 0.0 0.3329334095333255 0.0 3 5.046357097890496E-4 0.0 0.0 0.5103128615241764 0.0 4 5.046357097890496E-4 0.0 0.0 0.7238999256923917 0.0 5 5.046357097890496E-4 0.0 0.0 1.322019400719863 0.0 6 5.046357097890496E-4 0.0 0.0 1.740362404134985 0.0 7 6.307946372363121E-4 0.0 0.0 2.108241836571202 0.0 8 6.307946372363121E-4 0.0 0.0 2.7192295221982943 0.0 9 6.307946372363121E-4 0.0 0.0 2.979747707376891 0.0 10 6.307946372363121E-4 0.0 0.0 3.481229443979759 0.0 11 6.307946372363121E-4 0.0 0.0 4.189359503741243 0.0 12 6.307946372363121E-4 0.0 0.0 4.786469707349136 0.0 13 6.307946372363121E-4 0.0 0.0 5.040049151518134 0.0 14 6.307946372363121E-4 0.0 0.0 5.151321325526619 0.0 15 6.307946372363121E-4 0.0 0.0 5.3440921666660355 0.0 16 6.307946372363121E-4 0.0 0.0 5.700238818849658 0.0 17 6.307946372363121E-4 0.0 0.0 6.0923407653557495 0.0 18 6.307946372363121E-4 0.0 0.0 6.5437374077620545 0.0 19 6.307946372363121E-4 0.0 0.0 6.836678437294598 0.0 20 6.307946372363121E-4 0.0 0.0 7.122428407962647 0.0 21 6.307946372363121E-4 0.0 0.0 7.481855192259897 0.0 22 6.307946372363121E-4 0.0 0.0 7.854654822866558 0.0 23 6.307946372363121E-4 0.0 0.0 8.200834919781846 0.0 24 6.307946372363121E-4 0.0 0.0 8.485701777957765 0.0 25 6.307946372363121E-4 0.0 0.0 8.77069479506113 0.0 26 6.307946372363121E-4 0.0 0.0 9.009639803646245 0.0 27 6.307946372363121E-4 0.0 0.0 9.281259974440202 0.0 28 6.307946372363121E-4 0.0 0.0 9.54354438460306 0.0 29 6.307946372363121E-4 0.0 0.0 9.826771176722165 0.0 30 6.307946372363121E-4 0.0 0.0 10.160209221965278 0.0 31 6.307946372363121E-4 0.0 0.0 10.433343299888602 0.0 32 7.569535646835745E-4 0.0 0.0 10.703954199262979 0.0 33 7.569535646835745E-4 0.0 0.0 10.977845230750987 0.0 34 8.831124921308369E-4 0.0 0.0 11.274949504889289 0.0 35 8.831124921308369E-4 0.0 0.0 11.58038026823911 0.0 36 8.831124921308369E-4 0.0 0.0 11.854018981872224 0.0 37 8.831124921308369E-4 0.0 0.0 12.143301402508797 0.0 38 8.831124921308369E-4 0.0 0.0 12.459077197909295 0.0 39 8.831124921308369E-4 0.0 0.0 12.994874162777817 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGATAG 20 7.0319587E-4 45.000004 1 CGTAGCG 20 7.0319587E-4 45.000004 1 TCGTACA 20 7.0319587E-4 45.000004 34 CGGTCTA 40 6.8102963E-9 45.000004 31 CGTAAGG 50 2.1827873E-11 45.0 2 CGTTTTT 30005 0.0 44.47509 1 GGCGATA 125 0.0 41.399998 8 TAGTAGG 100 0.0 40.5 2 GTTTTTT 33160 0.0 40.38601 2 TTACACG 180 0.0 38.75 34 ATTACGG 35 6.2458366E-6 38.571426 2 ATGACGG 35 6.2458366E-6 38.571426 2 CGATAGC 35 6.2458366E-6 38.571426 10 ATGGGCG 155 0.0 37.741936 5 CCATACG 30 1.1396024E-4 37.499996 2 CCCTCGT 55 2.746674E-9 36.81818 14 GCTACGA 55 2.746674E-9 36.81818 10 TGGGCGA 245 0.0 36.734695 6 TGCGGGT 105 0.0 36.42857 4 TCACGAC 50 4.8756192E-8 36.0 25 >>END_MODULE