SRR2935681.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935681.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	436618
Sequences flagged as poor quality	0
Sequence length	51
%GC	33

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23348	5.3474662061573275	No Hit
GCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC	943	0.21597826933383416	No Hit
CCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC	735	0.1683393721743034	No Hit
CTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGCT	599	0.13719086249307175	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	549	0.12573920452203072	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	448	0.10260685542052778	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGAAAG	35	1.2096098E-7	45.000004	1
AGTACGG	35	1.2096098E-7	45.000004	2
TCGTTGT	20	7.028476E-4	45.0	37
CTCGTAC	20	7.028476E-4	45.0	29
CAACGGA	20	7.028476E-4	45.0	3
GCAACGG	45	3.8380676E-10	45.0	2
ATAGCGG	25	3.8868187E-5	45.0	2
GCCGGAG	20	7.028476E-4	45.0	1
ACGGGCG	45	3.8380676E-10	45.0	5
GTTACGG	20	7.028476E-4	45.0	2
TACGAAT	20	7.028476E-4	45.0	12
CGAATAT	20	7.028476E-4	45.0	14
GTATACG	20	7.028476E-4	45.0	1
CGTAACG	20	7.028476E-4	45.0	1
TTGCACG	20	7.028476E-4	45.0	1
CCGCAGG	20	7.028476E-4	45.0	2
GGTAGCG	20	7.028476E-4	45.0	1
AAGTCCG	20	7.028476E-4	45.0	1
CGTTTTT	15995	0.0	44.535797	1
TAACGTC	50	1.0786607E-9	40.5	32