SRR2935679.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935679.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	869857
Sequences flagged as poor quality	0
Sequence length	51
%GC	35

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	58102	6.679488697567532	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTT	2558	0.2940713243671086	No Hit
CGCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCTG	2037	0.2341764221015638	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTC	1935	0.22245035678278152	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCT	1375	0.15807195895417292	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	1302	0.14967977495151502	No Hit
CGTCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCT	1217	0.13990805385252977	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	1069	0.12289376299782608	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	952	0.10944327630863462	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTGTACG	20	7.032338E-4	45.000004	1
TAACGCG	20	7.032338E-4	45.000004	1
GTATGCG	30	2.1648902E-6	45.000004	1
ATACGCG	20	7.032338E-4	45.000004	1
TGTAACG	20	7.032338E-4	45.000004	1
GCCGATA	25	3.8900213E-5	45.0	9
TATACGG	35	1.2114651E-7	45.0	2
CGTTTTT	32970	0.0	44.467697	1
GTTTTTT	36250	0.0	40.48759	2
TACGTAG	40	3.4569348E-7	39.375004	1
GTCACGG	35	6.246537E-6	38.571426	2
TCACGGG	100	0.0	38.25	3
ACGGGTG	95	0.0	37.894737	5
TACGAAT	95	0.0	37.894737	12
TATTACG	30	1.13969334E-4	37.500004	1
TACCGGT	30	1.13969334E-4	37.500004	40
GCGAGAC	135	0.0	36.666664	21
CGAACAG	25	0.0021068277	36.0	1
GTCGACG	25	0.0021068277	36.0	1
GGCGTAG	25	0.0021068277	36.0	1