##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935679.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 869857 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.382662897464755 33.0 31.0 34.0 30.0 34.0 2 32.57963435369262 34.0 31.0 34.0 31.0 34.0 3 32.413156415364824 34.0 31.0 34.0 30.0 34.0 4 36.03700608260898 37.0 35.0 37.0 35.0 37.0 5 36.06842503997783 37.0 35.0 37.0 35.0 37.0 6 36.08138694061208 37.0 36.0 37.0 35.0 37.0 7 36.217508165135186 37.0 37.0 37.0 35.0 37.0 8 36.03482871322528 37.0 37.0 37.0 35.0 37.0 9 37.83872291652536 39.0 38.0 39.0 35.0 39.0 10 37.646290137344415 39.0 38.0 39.0 35.0 39.0 11 37.63582060039754 39.0 37.0 39.0 35.0 39.0 12 37.55351166915941 39.0 37.0 39.0 35.0 39.0 13 37.5393553193226 39.0 37.0 39.0 35.0 39.0 14 38.83844126103486 41.0 38.0 41.0 35.0 41.0 15 38.95468450561414 41.0 39.0 41.0 35.0 41.0 16 39.03623124260654 41.0 39.0 41.0 35.0 41.0 17 38.99947692551764 41.0 38.0 41.0 35.0 41.0 18 38.34247008416326 39.0 38.0 40.0 35.0 41.0 19 37.66076378071338 37.0 37.0 40.0 35.0 41.0 20 36.85208258368905 36.0 35.0 40.0 34.0 41.0 21 36.809869898155675 36.0 35.0 40.0 33.0 41.0 22 36.8132773547836 36.0 35.0 40.0 34.0 41.0 23 36.83495563063814 36.0 35.0 40.0 34.0 41.0 24 36.67759413328857 35.0 35.0 40.0 34.0 41.0 25 36.57251939111831 35.0 35.0 40.0 33.0 41.0 26 36.435908430926006 35.0 35.0 40.0 33.0 41.0 27 36.3518658814035 35.0 35.0 40.0 33.0 41.0 28 36.17156957982749 35.0 35.0 40.0 33.0 41.0 29 35.86968432742393 35.0 35.0 40.0 32.0 41.0 30 35.3595073673029 35.0 35.0 40.0 30.0 41.0 31 34.699359779825876 35.0 35.0 40.0 23.0 41.0 32 33.669927355875735 35.0 33.0 40.0 18.0 41.0 33 32.4724374236225 35.0 33.0 40.0 12.0 41.0 34 31.43366783275872 35.0 29.0 40.0 8.0 41.0 35 30.832501204220925 35.0 23.0 40.0 7.0 41.0 36 30.467976920344377 35.0 22.0 40.0 7.0 41.0 37 30.301189735784156 35.0 22.0 40.0 7.0 41.0 38 30.12930401203876 35.0 21.0 40.0 7.0 41.0 39 29.969800783347146 35.0 21.0 40.0 7.0 41.0 40 29.830523867716188 35.0 20.0 40.0 7.0 41.0 41 29.62062155043875 35.0 18.0 40.0 7.0 41.0 42 29.51498464690173 35.0 18.0 40.0 7.0 41.0 43 29.41953217597835 35.0 18.0 40.0 7.0 41.0 44 29.3203871440938 35.0 18.0 40.0 7.0 41.0 45 29.264973438162823 35.0 20.0 40.0 7.0 41.0 46 29.258982798322023 35.0 20.0 40.0 7.0 41.0 47 29.315765694821103 35.0 20.0 40.0 7.0 41.0 48 29.27119170162452 35.0 20.0 40.0 7.0 41.0 49 29.24033145677968 35.0 20.0 40.0 7.0 41.0 50 29.122908707983036 35.0 20.0 40.0 7.0 41.0 51 28.49951658720916 35.0 18.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 11.0 9 13.0 10 28.0 11 31.0 12 21.0 13 23.0 14 43.0 15 61.0 16 142.0 17 265.0 18 501.0 19 1000.0 20 1613.0 21 2636.0 22 4156.0 23 7128.0 24 13673.0 25 28638.0 26 47216.0 27 56161.0 28 50222.0 29 38397.0 30 28996.0 31 25272.0 32 24428.0 33 27723.0 34 44466.0 35 53642.0 36 57890.0 37 59138.0 38 105248.0 39 190926.0 40 148.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.48775258462023 13.168716237266583 14.787947904080786 46.5555832740324 2 59.153286114844164 14.747826366862599 15.211810676927357 10.887076841365879 3 19.842111979325338 14.905898325816771 54.3764089959614 10.875580698896485 4 17.732339913342077 16.114142899350124 53.869888958759894 12.28362822854791 5 15.882265705742437 18.383596384233268 53.178625912075205 12.555511997949086 6 16.26324786717817 20.702023436036036 52.75246391073475 10.28226478605104 7 50.089267546274854 3.7338321126346052 42.53480744536171 3.6420928957288377 8 51.28877505153145 3.0530305555970694 42.31500120134689 3.343193191524584 9 47.54597594777073 4.395550073172947 43.687755573617274 4.370718405439055 10 25.301630038040734 17.150750065815416 48.02042174748264 9.527198148661217 11 18.385780651302454 16.455003523567665 52.868919833949725 12.29029599118016 12 17.38343198939596 14.227625920122502 55.2251691944768 13.163772896004748 13 16.343835825888622 14.213255742035761 56.303622319530675 13.139286112544934 14 13.044442937172432 16.162311736296886 56.987182950760875 13.806062375769809 15 12.594828805194416 16.212779801737526 57.99355526253166 13.198836130536398 16 15.741667883341744 16.91105549532854 55.19160045846616 12.155676162863552 17 15.746381301754198 16.816557204230122 53.678478186644476 13.758583307371211 18 16.43971365408337 16.248302881967955 54.331574040330764 12.980409423617905 19 15.713617295716423 17.997211035836923 53.00848300352816 13.280688664918486 20 15.136510943752823 18.295995778616486 53.0648141016282 13.502679176002491 21 15.208016949912457 17.780853634562924 54.946732623868066 12.06439679165656 22 14.86094840876144 15.629005687141678 55.55384390767678 13.9562019964201 23 13.99471407369257 16.343375980189847 55.346798381802984 14.315111564314595 24 14.466975606335295 16.426493090243568 54.67818273578301 14.42834856763813 25 15.457713164347703 17.0200389259384 52.992503365495715 14.529744544218188 26 13.93746328419499 17.026016920022485 53.04906438644513 15.987455409337398 27 14.057138127301382 16.10563575392277 54.00933716691364 15.827888951862205 28 13.689606452554845 16.942554925694683 53.34658455355306 16.021254068197415 29 14.205783249430654 16.920137447879362 53.078724434016166 15.795354868673817 30 15.452539900236475 16.151275439526266 52.460002046313356 15.936182613923897 31 15.248138487130644 17.61209026311221 51.08920201826277 16.05056923149437 32 15.966072584344323 18.45533231324229 49.04737215427363 16.53122294813975 33 16.477650924232375 19.770491011741008 46.18954609780688 17.562311966219735 34 15.592103069814925 22.20732833097854 45.04544999925275 17.155118599953788 35 16.34958389712332 23.82506549927172 42.03909378208142 17.786256821523537 36 18.333013357367935 25.14930615032126 39.45142707364544 17.06625341866537 37 18.020893089323877 25.701465873126274 39.1883953339457 17.089245703604156 38 18.536954924774992 25.073546571447952 38.7648774453732 17.624621058403854 39 18.705258450526927 24.635543543364026 38.04797800098177 18.61122000512728 40 20.26459521507558 23.6792944127598 38.96628986143699 17.089820510727623 41 18.432569951152892 24.697047905575285 38.2050153071137 18.665366836158125 42 18.683070895560995 24.97559943760871 38.451607563082206 17.88972210374809 43 18.419924194436557 24.109939909663314 38.821783350596704 18.648352545303425 44 18.89770387546459 23.762641445662908 38.228007592052485 19.111647086820017 45 18.326920401859155 22.967223348205508 38.38228582399176 20.323570425943576 46 17.925934952526678 23.08183988862537 39.136547731408726 19.855677427439222 47 17.16132651688726 22.94538067751366 40.75325024687966 19.140042558719422 48 16.891627014555265 22.944920831814887 41.075946965995556 19.087505187634292 49 17.62013756284079 21.97441648454861 41.05352948818024 19.35191646443036 50 16.127708347464008 22.00028280510475 42.280627735363396 19.591381112067847 51 16.539730093567105 22.033736579690686 40.93695860354058 20.489574723201628 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 252.0 1 486.5 2 721.0 3 50728.0 4 100735.0 5 66786.5 6 32838.0 7 31235.5 8 29633.0 9 28934.0 10 28235.0 11 27188.0 12 26141.0 13 24599.5 14 23058.0 15 21119.5 16 19181.0 17 17712.0 18 16243.0 19 14800.5 20 13358.0 21 12034.0 22 10710.0 23 10060.0 24 9410.0 25 9284.5 26 9306.5 27 9454.0 28 9553.0 29 9652.0 30 10510.5 31 11369.0 32 12147.5 33 12926.0 34 14681.0 35 16436.0 36 17115.0 37 17794.0 38 19128.5 39 20463.0 40 21815.5 41 23168.0 42 24992.5 43 26817.0 44 29780.5 45 32744.0 46 39229.0 47 45714.0 48 49938.5 49 54163.0 50 53942.5 51 53722.0 52 47848.0 53 41974.0 54 38459.0 55 34944.0 56 32829.5 57 30715.0 58 29047.5 59 27380.0 60 25083.5 61 22787.0 62 20117.0 63 17447.0 64 15570.5 65 13694.0 66 11602.0 67 9510.0 68 8187.5 69 6865.0 70 5509.5 71 4154.0 72 3422.0 73 2690.0 74 2295.0 75 1405.0 76 910.0 77 678.5 78 447.0 79 320.5 80 194.0 81 139.5 82 85.0 83 61.5 84 38.0 85 23.5 86 9.0 87 10.5 88 12.0 89 6.5 90 1.0 91 1.0 92 1.0 93 1.5 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 869857.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.41761062627213 #Duplication Level Percentage of deduplicated Percentage of total 1 78.96020783603204 35.861839744664245 2 7.622344149687265 6.923773172998791 3 3.177395381336448 4.329291187057627 4 1.9418546174450133 3.527775876317849 5 1.450056728049697 3.292905593028366 6 1.14186125407458 3.111636589607164 7 0.9197547670490868 2.924114471704514 8 0.8108094261600958 2.9460021447560303 9 0.7064273916179956 2.887581978741526 >10 3.173002377325446 20.312437709719546 >50 0.04865268051649237 1.5828744693002696 >100 0.04253891041724263 3.3287357403312803 >500 0.003056688173182578 0.9196163207568891 >1k 0.0017830681010231708 1.3296201251049098 >5k 0.0 0.0 >10k+ 2.5472401443188153E-4 6.721794875911029 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 58102 6.679488697567532 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTT 2558 0.2940713243671086 No Hit CGCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCTG 2037 0.2341764221015638 No Hit CGTTCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTC 1935 0.22245035678278152 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCT 1375 0.15807195895417292 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1302 0.14967977495151502 No Hit CGTCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCT 1217 0.13990805385252977 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 1069 0.12289376299782608 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 952 0.10944327630863462 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.897685481636637E-4 0.0 0.0 0.06713747202126326 0.0 2 6.897685481636637E-4 0.0 0.0 0.2633766239738256 0.0 3 6.897685481636637E-4 0.0 0.0 0.6278043402536279 0.0 4 6.897685481636637E-4 0.0 0.0 0.9483167923003436 0.0 5 6.897685481636637E-4 0.0 0.0 1.7277552517252837 0.0 6 6.897685481636637E-4 0.0 0.0 2.787354703129365 0.0 7 6.897685481636637E-4 0.0 0.0 3.5119565629752936 0.0 8 6.897685481636637E-4 0.0 0.0 4.386583082046819 0.0 9 6.897685481636637E-4 0.0 0.0 4.935983730659177 0.0 10 6.897685481636637E-4 0.0 0.0 5.616555364847326 0.0 11 6.897685481636637E-4 0.0 0.0 6.335754037732639 0.0 12 6.897685481636637E-4 0.0 0.0 6.889293297633979 0.0 13 6.897685481636637E-4 0.0 0.0 7.204862408418855 0.0 14 6.897685481636637E-4 0.0 0.0 7.435704949204294 0.0 15 6.897685481636637E-4 0.0 0.0 7.6243566471270565 0.0 16 6.897685481636637E-4 0.0 0.0 7.884284428360064 0.0 17 6.897685481636637E-4 0.0 0.0 8.1835290168384 0.0 18 6.897685481636637E-4 0.0 0.0 8.51174388433961 0.0 19 6.897685481636637E-4 0.0 0.0 8.731320205505043 0.0 20 8.047299728576076E-4 0.0 0.0 8.970669891717835 0.0 21 8.047299728576076E-4 0.0 0.0 9.259912836247796 0.0 22 9.196913975515516E-4 0.0 0.0 9.55846765617797 0.0 23 9.196913975515516E-4 0.0 0.0 9.851504327722832 0.0 24 9.196913975515516E-4 0.0 0.0 10.08809493974297 0.0 25 0.0010346528222454955 0.0 0.0 10.311809872197385 0.0 26 0.0010346528222454955 0.0 0.0 10.534605113254248 0.0 27 0.0011496142469394396 0.0 0.0 10.778208372180714 0.0 28 0.0012645756716333834 0.0 0.0 10.999509114716556 0.0 29 0.0012645756716333834 0.0 0.0 11.247710830630782 0.0 30 0.0012645756716333834 0.0 0.0 11.53913804222993 0.0 31 0.0013795370963273273 0.0 0.0 11.79101852373436 0.0 32 0.0014944985210212714 0.0 0.0 12.054854993406963 0.0 33 0.0014944985210212714 0.0 0.0 12.323749765766097 0.0 34 0.0014944985210212714 0.0 0.0 12.60483044914279 0.0 35 0.0014944985210212714 0.0 0.0 12.870506301610495 0.0 36 0.0014944985210212714 0.0 0.0 13.11112056349492 0.0 37 0.0018393827951031032 0.0 0.0 13.375186956016908 0.0 38 0.002069305644490991 0.0 0.0 13.705011283463834 0.0 39 0.002069305644490991 0.0 0.0 14.239696869715367 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGTACG 20 7.032338E-4 45.000004 1 TAACGCG 20 7.032338E-4 45.000004 1 GTATGCG 30 2.1648902E-6 45.000004 1 ATACGCG 20 7.032338E-4 45.000004 1 TGTAACG 20 7.032338E-4 45.000004 1 GCCGATA 25 3.8900213E-5 45.0 9 TATACGG 35 1.2114651E-7 45.0 2 CGTTTTT 32970 0.0 44.467697 1 GTTTTTT 36250 0.0 40.48759 2 TACGTAG 40 3.4569348E-7 39.375004 1 GTCACGG 35 6.246537E-6 38.571426 2 TCACGGG 100 0.0 38.25 3 ACGGGTG 95 0.0 37.894737 5 TACGAAT 95 0.0 37.894737 12 TATTACG 30 1.13969334E-4 37.500004 1 TACCGGT 30 1.13969334E-4 37.500004 40 GCGAGAC 135 0.0 36.666664 21 CGAACAG 25 0.0021068277 36.0 1 GTCGACG 25 0.0021068277 36.0 1 GGCGTAG 25 0.0021068277 36.0 1 >>END_MODULE