##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935678.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 539021 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.40538494789628 33.0 31.0 34.0 30.0 34.0 2 32.60603761263476 34.0 31.0 34.0 31.0 34.0 3 32.44964110860245 34.0 31.0 34.0 30.0 34.0 4 36.06658924234863 37.0 35.0 37.0 35.0 37.0 5 36.098994287792124 37.0 35.0 37.0 35.0 37.0 6 36.10519998293202 37.0 36.0 37.0 35.0 37.0 7 36.2571643776402 37.0 37.0 37.0 35.0 37.0 8 36.06123138059556 37.0 37.0 37.0 35.0 37.0 9 37.87106068223687 39.0 38.0 39.0 35.0 39.0 10 37.6961732474245 39.0 38.0 39.0 35.0 39.0 11 37.634389012672976 39.0 37.0 39.0 35.0 39.0 12 37.50416959636081 39.0 37.0 39.0 35.0 39.0 13 37.44385840254832 39.0 37.0 39.0 35.0 39.0 14 38.63991755423258 41.0 38.0 41.0 34.0 41.0 15 38.81141551071294 41.0 38.0 41.0 34.0 41.0 16 38.923524315379176 41.0 38.0 41.0 35.0 41.0 17 38.929798653484745 41.0 38.0 41.0 35.0 41.0 18 38.27907818062747 39.0 38.0 40.0 35.0 41.0 19 37.579391155446636 37.0 37.0 40.0 35.0 41.0 20 36.74492644998989 35.0 35.0 40.0 34.0 41.0 21 36.70350320302919 35.0 35.0 40.0 33.0 41.0 22 36.717411752046765 35.0 35.0 40.0 34.0 41.0 23 36.748481042482574 35.0 35.0 40.0 34.0 41.0 24 36.59154281558603 35.0 35.0 40.0 34.0 41.0 25 36.49068218121372 35.0 35.0 40.0 33.0 41.0 26 36.341391151736204 35.0 35.0 40.0 33.0 41.0 27 36.26207698772404 35.0 35.0 40.0 33.0 41.0 28 36.11533131362229 35.0 35.0 40.0 33.0 41.0 29 35.84692618654932 35.0 35.0 40.0 33.0 41.0 30 35.32227686861922 35.0 35.0 40.0 31.0 41.0 31 34.64623641750507 35.0 35.0 40.0 24.0 41.0 32 33.617840492299926 35.0 34.0 40.0 18.0 41.0 33 32.47049558366 35.0 33.0 40.0 12.0 41.0 34 31.45256307268177 35.0 29.0 40.0 8.0 41.0 35 30.873426081729654 35.0 24.0 40.0 7.0 41.0 36 30.502683568914755 35.0 23.0 40.0 7.0 41.0 37 30.32762916472642 35.0 23.0 40.0 7.0 41.0 38 30.166653989362196 35.0 22.0 40.0 7.0 41.0 39 30.00217616753336 35.0 21.0 40.0 7.0 41.0 40 29.842601679711922 35.0 21.0 40.0 7.0 41.0 41 29.631392839982116 35.0 20.0 40.0 7.0 41.0 42 29.561377014995706 35.0 19.0 40.0 7.0 41.0 43 29.49604746382794 35.0 18.0 40.0 7.0 41.0 44 29.39815146348658 35.0 18.0 40.0 7.0 41.0 45 29.35856116923088 35.0 20.0 40.0 7.0 41.0 46 29.359705837063863 35.0 20.0 40.0 7.0 41.0 47 29.415640578010876 35.0 20.0 40.0 7.0 41.0 48 29.400758040966863 35.0 20.0 40.0 7.0 41.0 49 29.43414264008267 35.0 20.0 39.0 7.0 41.0 50 29.341393006951492 35.0 20.0 39.0 7.0 41.0 51 28.702660935288236 35.0 20.0 38.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 5.0 9 4.0 10 7.0 11 7.0 12 13.0 13 18.0 14 15.0 15 46.0 16 64.0 17 138.0 18 309.0 19 557.0 20 958.0 21 1499.0 22 2390.0 23 4272.0 24 8445.0 25 17374.0 26 29032.0 27 33659.0 28 30468.0 29 23045.0 30 17702.0 31 15117.0 32 15190.0 33 18508.0 34 31573.0 35 38824.0 36 38199.0 37 36547.0 38 62447.0 39 112500.0 40 86.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.709016902866495 13.615610523523202 15.018338803126408 45.6570337704839 2 59.030909741921 14.895523551030479 15.097927539001263 10.975639168047255 3 20.33649894902054 15.375282224625755 53.02149637954736 11.26672244680634 4 18.62283658707175 15.636311015711819 53.16490452134518 12.575947875871254 5 16.10345422534558 18.421731249802882 52.60685576257696 12.867958762274567 6 16.9603781670844 21.09992004022107 52.17588925106814 9.763812541626393 7 50.36427152188876 3.7493900979739196 42.446769235335914 3.4395691448014083 8 50.98855146645492 3.2059975399845273 42.31708968667269 3.4883613068878576 9 47.38479576862497 4.312633459549813 43.734474167054714 4.5680966047705 10 28.724112789668677 13.12267982137987 48.23151602627727 9.921691362674181 11 20.56802981702012 14.178482842041404 52.08238640052984 13.171100940408632 12 19.109459557234317 12.808591873043905 55.14330610495695 12.938642464764824 13 17.401733884208593 13.620248561744347 56.36366672170472 12.614350832342339 14 13.473315510898463 15.488264835692858 57.61779225670243 13.42062739670625 15 12.53940013468863 15.047651204684048 59.23925041881485 13.17369824181247 16 16.430157637643063 14.616128128588683 55.71768075826359 13.236033475504666 17 16.649073041681124 14.441737891473617 53.87879136434387 15.030397702501386 18 16.65389660143111 14.715567668050038 55.420660790581444 13.209874939937405 19 16.544438899412082 16.203821372451166 53.852076264190075 13.399663463946673 20 15.83129414252877 17.762016693227164 54.28415590487198 12.122533259372084 21 15.680279618048276 15.884724342836364 56.46013791670455 11.974858122410815 22 14.714825581934656 14.006318863272488 56.24919993840686 15.029655616386004 23 14.019119848762852 15.337250311212363 56.31005099986828 14.333578840156505 24 14.961569215299589 16.184898176508895 54.39064526242948 14.462887345762038 25 15.436133286087184 16.221631439220364 53.40942189636396 14.932813378328488 26 13.666072379369265 16.151504301316645 53.54114218184449 16.641281137469598 27 13.682398273907696 15.547075160336982 55.340886533177745 15.429640032577579 28 12.459996920342622 16.09547679960521 54.911033150841995 16.533493129210182 29 14.184234009435626 16.972437066459378 53.61943226701743 15.223896657087572 30 15.77637976999041 16.379695781797 52.60574263340389 15.2381818148087 31 15.868398448297933 17.07391734273804 51.73267831865549 15.32500589030854 32 17.831587266544346 18.468853718129722 48.17122152940238 15.528337485923554 33 17.484105443016134 19.722051645483198 45.88986328918539 16.903979622315273 34 15.551713198558126 21.06485647126921 46.10302752582923 17.28040280434343 35 17.504512811189173 23.58052840241846 41.7004161247892 17.214542661603165 36 18.991653386417227 23.741190046398934 40.00400726502307 17.26314930216077 37 18.151797425332223 24.653399403733804 40.31327165360904 16.881531517324927 38 19.514453054704735 24.34524814432091 38.653781578083226 17.48651722289113 39 18.426183766495182 23.43211117934181 38.97454830145764 19.167156752705367 40 19.822975357175324 22.718966422458493 40.15483626797472 17.303221952391464 41 17.97276914999601 23.32562182178431 38.37883867233373 20.32277035588595 42 17.59282105891978 23.34510158231312 39.706801775812075 19.355275582955024 43 18.023602048899765 22.743826307323832 39.53333914634124 19.699232497435165 44 18.36811552796644 22.592255218256803 39.47842477380288 19.561204479973878 45 18.668660404696663 22.067600334680836 38.906461900371234 20.35727736025127 46 18.31542741377423 22.456824502199357 40.21847015236883 19.00927793165758 47 16.201409592576173 22.04218388522896 42.87996200519089 18.876444517003975 48 16.600651922652364 22.451073334805137 41.862376419471595 19.0858983230709 49 18.14882908087069 20.887126846634917 42.46161095764358 18.502433114850813 50 16.513827847152523 21.385994237701315 42.416158183076355 19.684019732069807 51 16.44128892937381 21.910092556690742 40.8050892265793 20.84352928735615 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 129.0 1 305.5 2 482.0 3 33233.5 4 65985.0 5 42889.0 6 19793.0 7 19032.0 8 18271.0 9 18022.5 10 17774.0 11 17067.5 12 16361.0 13 15273.0 14 14185.0 15 12880.5 16 11576.0 17 10451.0 18 9326.0 19 8471.0 20 7616.0 21 6953.5 22 6291.0 23 5912.5 24 5534.0 25 5401.5 26 5110.0 27 4951.0 28 5120.0 29 5289.0 30 5770.5 31 6252.0 32 6553.5 33 6855.0 34 7734.5 35 8614.0 36 8971.5 37 9329.0 38 10023.0 39 10717.0 40 11844.5 41 12972.0 42 14795.5 43 16619.0 44 18528.0 45 20437.0 46 24000.5 47 27564.0 48 30906.5 49 34249.0 50 34174.0 51 34099.0 52 30165.5 53 26232.0 54 23992.0 55 21752.0 56 20544.5 57 19337.0 58 18771.0 59 18205.0 60 16240.0 61 14275.0 62 13287.0 63 12299.0 64 11256.5 65 10214.0 66 8486.0 67 6758.0 68 5900.5 69 5043.0 70 4278.5 71 3514.0 72 2931.5 73 2349.0 74 1754.5 75 886.0 76 612.0 77 542.5 78 473.0 79 320.0 80 167.0 81 110.0 82 53.0 83 34.5 84 16.0 85 13.5 86 11.0 87 9.5 88 8.0 89 4.0 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 539021.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.6809277660687 #Duplication Level Percentage of deduplicated Percentage of total 1 80.82506611115171 36.11338940600096 2 7.868954520224747 7.031843770252834 3 2.83324714516136 3.797763331091252 4 1.421201038979672 2.5400232385485 5 0.9189672660239142 2.0530155016298077 6 0.7329124570992946 1.9648325132703304 7 0.5676540095177766 1.7754315456768133 8 0.5080649773866656 1.8160651644066346 9 0.4583766239241881 1.8432623540889974 >10 3.7530884113740997 27.67281671267257 >50 0.07943796817878 2.526398593907837 >100 0.029266619853764244 2.276261968761478 >500 0.0033447565547159138 0.9426358550981059 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 4.180945693394892E-4 7.64626004459385 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 40931 7.59358169718805 No Hit GCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCTTCTGC 767 0.14229501262474004 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCTTCTGC 763 0.14155292650935677 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 696 0.12912298407668718 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 636 0.11799169234593827 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 617 0.1144667832978678 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10259340545173565 0.0 2 0.0 0.0 0.0 0.5025778216433126 0.0 3 0.0 0.0 0.0 0.7485793688928631 0.0 4 0.0 0.0 0.0 1.0405902552961759 0.0 5 0.0 0.0 0.0 1.8830435177850213 0.0 6 0.0 0.0 0.0 2.3791280859187305 0.0 7 0.0 0.0 0.0 2.8874570749562634 0.0 8 0.0 0.0 0.0 3.6328825778587475 0.0 9 0.0 0.0 0.0 3.923038248973602 0.0 10 0.0 0.0 0.0 4.558263963741672 0.0 11 0.0 0.0 0.0 5.507948669903399 0.0 12 0.0 0.0 0.0 6.250591349873196 0.0 13 0.0 0.0 0.0 6.53722211193998 0.0 14 0.0 0.0 0.0 6.679702646093566 0.0 15 0.0 0.0 0.0 6.903627131410465 0.0 16 0.0 0.0 0.0 7.350734015928879 0.0 17 0.0 0.0 0.0 7.8483027562933545 0.0 18 0.0 0.0 0.0 8.43900330413843 0.0 19 0.0 0.0 0.0 8.785743041551257 0.0 20 0.0 0.0 0.0 9.136564252598692 0.0 21 0.0 0.0 0.0 9.581630400299803 0.0 22 0.0 0.0 0.0 10.05118538980856 0.0 23 0.0 0.0 0.0 10.491613499288524 0.0 24 0.0 0.0 0.0 10.839095322816735 0.0 25 0.0 0.0 0.0 11.171920945566129 0.0 26 0.0 0.0 0.0 11.47821698969057 0.0 27 0.0 0.0 0.0 11.878386927410991 0.0 28 3.7104305769162984E-4 0.0 0.0 12.214551937679609 0.0 29 3.7104305769162984E-4 0.0 0.0 12.575391311284719 0.0 30 5.565645865374448E-4 0.0 0.0 12.973149469130146 0.0 31 5.565645865374448E-4 0.0 0.0 13.286866374408419 0.0 32 5.565645865374448E-4 0.0 0.0 13.607447576253987 0.0 33 7.420861153832597E-4 0.0 0.0 13.923576261407256 0.0 34 7.420861153832597E-4 0.0 0.0 14.275510601627765 0.0 35 7.420861153832597E-4 0.0 0.0 14.649522003780929 0.0 36 7.420861153832597E-4 0.0 0.0 14.956189090963061 0.0 37 7.420861153832597E-4 0.0 0.0 15.314802206222021 0.0 38 7.420861153832597E-4 0.0 0.0 15.722949569682815 0.0 39 7.420861153832597E-4 0.0 0.0 16.432198374460363 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGA 20 7.02995E-4 45.0 15 GCACGAA 20 7.02995E-4 45.0 34 ATCGTAG 20 7.02995E-4 45.0 15 ATATCGT 20 7.02995E-4 45.0 13 ATGACCG 20 7.02995E-4 45.0 18 GACGATA 25 3.88804E-5 45.0 9 TATCGTA 20 7.02995E-4 45.0 14 CGATATC 20 7.02995E-4 45.0 11 GCGTAAG 25 3.88804E-5 45.0 1 TACCGGT 20 7.02995E-4 45.0 40 CGTTTTT 20350 0.0 44.668304 1 CTACGAA 115 0.0 43.043476 11 TACGAAT 115 0.0 43.043476 12 GCTACGA 120 0.0 41.249996 10 GTTTTTT 22180 0.0 41.145176 2 ACGGGCC 55 6.002665E-11 40.909092 5 ATAGTAG 45 1.9250365E-8 40.000004 1 TCTACGG 40 3.4536606E-7 39.375 2 GACGGTC 40 3.4536606E-7 39.375 29 CGGTCTA 40 3.4536606E-7 39.375 31 >>END_MODULE