##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935677.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 747035 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.58338230471129 34.0 31.0 34.0 31.0 34.0 2 32.77916965068571 34.0 31.0 34.0 31.0 34.0 3 32.62066569839432 34.0 31.0 34.0 31.0 34.0 4 36.1874303078169 37.0 37.0 37.0 35.0 37.0 5 36.21943014718186 37.0 37.0 37.0 35.0 37.0 6 36.233678475573434 37.0 37.0 37.0 35.0 37.0 7 36.360518583466636 37.0 37.0 37.0 35.0 37.0 8 36.156458532732735 37.0 37.0 37.0 35.0 37.0 9 37.96688106982939 39.0 39.0 39.0 35.0 39.0 10 37.83414967170213 39.0 38.0 39.0 35.0 39.0 11 37.81564853052401 39.0 38.0 39.0 35.0 39.0 12 37.73832551353016 39.0 38.0 39.0 35.0 39.0 13 37.71933978996968 39.0 38.0 39.0 35.0 39.0 14 39.101779702423585 41.0 39.0 41.0 35.0 41.0 15 39.2232318432202 41.0 39.0 41.0 35.0 41.0 16 39.27844880092633 41.0 39.0 41.0 35.0 41.0 17 39.23039081167549 41.0 39.0 41.0 35.0 41.0 18 38.55319228684064 39.0 39.0 41.0 35.0 41.0 19 37.84563775458981 37.0 37.0 41.0 35.0 41.0 20 37.01235417349923 36.0 35.0 41.0 34.0 41.0 21 36.9694887120416 36.0 35.0 41.0 34.0 41.0 22 36.96782613933751 36.0 35.0 41.0 34.0 41.0 23 36.95697122624777 36.0 35.0 40.0 34.0 41.0 24 36.82151304825075 35.0 35.0 41.0 34.0 41.0 25 36.73103937566513 35.0 35.0 40.0 34.0 41.0 26 36.58469281894423 35.0 35.0 40.0 34.0 41.0 27 36.50951829566218 35.0 35.0 40.0 33.0 41.0 28 36.316438988802396 35.0 35.0 40.0 33.0 41.0 29 36.03535845040728 35.0 35.0 40.0 33.0 41.0 30 35.49426867549713 35.0 35.0 40.0 31.0 41.0 31 34.77363041892281 35.0 35.0 40.0 23.0 41.0 32 33.71232271580314 35.0 34.0 40.0 17.0 41.0 33 32.51911891678436 35.0 33.0 40.0 12.0 41.0 34 31.530225491442838 35.0 29.0 40.0 8.0 41.0 35 30.92535824961347 35.0 23.0 40.0 7.0 41.0 36 30.56350773390805 35.0 22.0 40.0 7.0 41.0 37 30.389319108207783 35.0 22.0 40.0 7.0 41.0 38 30.22704157101073 35.0 21.0 40.0 7.0 41.0 39 30.09362211944554 35.0 21.0 40.0 7.0 41.0 40 29.959155862844444 35.0 20.0 40.0 7.0 41.0 41 29.78744637132129 35.0 20.0 40.0 7.0 41.0 42 29.702971078998974 35.0 18.0 40.0 7.0 41.0 43 29.5940792600079 35.0 18.0 40.0 7.0 41.0 44 29.47492821621477 35.0 18.0 40.0 7.0 41.0 45 29.429835282148762 35.0 20.0 40.0 7.0 41.0 46 29.411425167495498 35.0 20.0 40.0 7.0 41.0 47 29.43358477179784 35.0 20.0 40.0 7.0 41.0 48 29.388023318853868 35.0 20.0 40.0 7.0 41.0 49 29.35038385082359 35.0 20.0 40.0 7.0 41.0 50 29.246537310835503 35.0 20.0 40.0 7.0 41.0 51 28.66369581077192 35.0 20.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 14.0 10 14.0 11 16.0 12 7.0 13 16.0 14 17.0 15 33.0 16 59.0 17 158.0 18 306.0 19 548.0 20 1101.0 21 1847.0 22 3130.0 23 5451.0 24 11245.0 25 23001.0 26 39836.0 27 49251.0 28 44781.0 29 33466.0 30 24643.0 31 19933.0 32 18653.0 33 21264.0 34 35341.0 35 47976.0 36 49846.0 37 46992.0 38 87463.0 39 180430.0 40 188.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.97843474535999 12.717476423460747 14.792078015086307 46.51201081609295 2 59.474321818924146 14.414317936910587 15.445728781114672 10.665631463050593 3 21.209314155293928 14.841473291077392 53.18131011264532 10.767902440983354 4 18.154303345894103 15.707697765164951 53.32400757661957 12.813991312321377 5 15.963509072533416 18.362325727710214 53.256005408046484 12.418159791709893 6 16.359072868071777 21.706345753545683 52.36515022723166 9.569431151150882 7 50.59803088208719 3.660069474656475 42.65476182508182 3.0871378181745164 8 51.03107618786268 3.300648563989639 42.57484589075479 3.0934293573928935 9 47.45534011123977 4.704464984906999 43.756718226053664 4.083476677799568 10 25.47993065920606 16.46054067078517 48.46841178793497 9.591116882073798 11 19.770827337407216 16.809921891209918 51.72609047768846 11.693160293694405 12 18.450139551694363 14.366395148821676 55.006927386267044 12.176537913216917 13 16.91553943255671 14.34578031819125 55.71131205365211 13.027368195599939 14 13.203263568641363 17.317662492386567 55.71131205365211 13.767761885319965 15 12.591110188946969 16.267377030527353 58.45214748974278 12.689365290782895 16 14.686995923885762 16.10500177367861 56.84178117491149 12.366221127524145 17 14.834378576639647 15.220304269545604 54.97038291378583 14.974934240028915 18 15.908223844933639 15.789086187394167 54.951508296130704 13.351181671541493 19 16.564417999156667 16.866278019102186 53.98100490606197 12.588299075679185 20 16.967478096742454 16.760928202828516 53.95182287309163 12.319770827337408 21 16.630813817291024 15.80943329295147 55.19393334984305 12.365819539914462 22 14.727154684854124 15.849592053919832 54.920318325111936 14.502934936114103 23 14.587536059220788 16.328953797345505 55.1354354213658 13.948074722067908 24 14.635324984773138 15.928169362881256 55.05926763806247 14.377238014283133 25 15.122852342929047 16.710194301471816 53.75718674493163 14.409766610667504 26 13.919160414170689 16.857576954225706 54.1875547999759 15.0357078316277 27 13.749958167957324 17.025976025219702 54.89234105497065 14.331724751852324 28 13.460547363911997 17.182862918069432 55.21588680583909 14.140702912179485 29 14.349662331751526 17.31779635492313 54.362111547651715 13.97042976567363 30 15.02218771543502 16.432027950497634 54.10710341550262 14.438680918564724 31 15.577181792017777 18.082285301224175 51.631315801803126 14.709217104954922 32 16.132309731137095 19.446344548782854 49.557115797787255 14.864229922292798 33 17.029858038779977 20.8087974459028 46.83113910325486 15.330205412062353 34 16.15305842430408 21.90566707048532 45.229339990763485 16.711934514447112 35 16.44702055459249 23.836366435307582 42.518088175252835 17.198524834847095 36 17.972518021243985 25.33428821942747 40.52166230497902 16.171531454349527 37 18.042661990402056 25.474843882816735 40.14095725099895 16.34153687578226 38 18.32819078088711 25.620620185131887 38.90781556419712 17.143373469783878 39 18.962029891504415 24.106233309014975 38.553481429919614 18.378255369560996 40 18.786669968609235 24.51344314523416 39.995582536293476 16.704304349863126 41 16.8217017944273 25.848454222359056 39.16536708454089 18.164476898672753 42 17.644688669205593 25.81739811387686 39.24755868198947 17.29035453492808 43 18.609302107665638 24.73873379426667 38.95426586438386 17.69769823368383 44 17.6567362974961 24.890667773263637 39.06416700690061 18.38842892233965 45 17.478029811186893 23.95470091762769 39.13230303801027 19.434966233175153 46 17.288748184489346 24.394171625158126 39.928383542939756 18.38869664741277 47 16.763873178632863 23.917620995000235 41.46833816353986 17.850167662827044 48 16.73402183297971 23.65832926168118 41.200746952954006 18.406901952385095 49 17.38445989813061 22.38663516434973 41.92895915184697 18.29994578567269 50 15.893231240838782 22.498142657305216 42.1462180486858 19.4624080531702 51 16.045566807445436 22.5565067232459 40.6952820148989 20.702644454409764 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 168.0 1 437.0 2 706.0 3 47227.0 4 93748.0 5 62355.5 6 30963.0 7 29412.5 8 27862.0 9 26776.0 10 25690.0 11 24158.5 12 22627.0 13 21031.0 14 19435.0 15 17955.0 16 16475.0 17 15026.0 18 13577.0 19 12353.0 20 11129.0 21 10128.5 22 9128.0 23 8333.0 24 7538.0 25 7364.5 26 7080.5 27 6970.0 28 7595.0 29 8220.0 30 8763.5 31 9307.0 32 10012.0 33 10717.0 34 11682.5 35 12648.0 36 13750.0 37 14852.0 38 16093.0 39 17334.0 40 18873.5 41 20413.0 42 22474.0 43 24535.0 44 26739.5 45 28944.0 46 32434.0 47 35924.0 48 38674.0 49 41424.0 50 41361.5 51 41299.0 52 37429.5 53 33560.0 54 30426.0 55 27292.0 56 26434.0 57 25576.0 58 24810.0 59 24044.0 60 23329.5 61 22615.0 62 20629.5 63 18644.0 64 16030.5 65 13417.0 66 10803.0 67 8189.0 68 7013.0 69 5837.0 70 4773.5 71 3710.0 72 2995.0 73 2280.0 74 1884.0 75 1100.0 76 712.0 77 579.5 78 447.0 79 368.5 80 290.0 81 177.5 82 65.0 83 39.0 84 13.0 85 18.5 86 24.0 87 13.0 88 2.0 89 3.5 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 747035.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.30589774642315 #Duplication Level Percentage of deduplicated Percentage of total 1 80.21577257556379 32.331687270810086 2 7.359249931903227 5.932423504913259 3 2.6135462205246154 3.160239801600475 4 1.4044043708594416 2.2642311586596153 5 0.9555832609599823 1.9257820602223314 6 0.7810307518898728 1.8888087373491118 7 0.6736330935463858 1.9005970610961125 8 0.6006133172155214 1.9366607159063047 9 0.5162484130956323 1.8727070174987197 >10 4.736843838807724 32.44416898843625 >50 0.08577752348042576 2.4497144967891544 >100 0.05361094938328977 3.5083896949033355 >500 0.0026805474691644487 0.7395466151855602 >1k 6.701368672911122E-4 0.2827996004745367 >5k 0.0 0.0 >10k+ 3.350684336455561E-4 7.362243276155154 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 54514 7.2973823180975455 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1089 0.14577630231515257 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 1005 0.13453184924401132 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 896 0.11994083275883995 No Hit GCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 796 0.10655457910271943 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA 777 0.10401119090805652 No Hit CCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 748 0.10012917734778157 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.677250731224106E-4 0.0 0.0 0.07349053257210171 0.0 2 2.677250731224106E-4 0.0 0.0 0.3535309590581432 0.0 3 2.677250731224106E-4 0.0 0.0 0.5270168064414653 0.0 4 2.677250731224106E-4 0.0 0.0 0.7254010856251715 0.0 5 2.677250731224106E-4 0.0 0.0 1.3044904187889457 0.0 6 2.677250731224106E-4 0.0 0.0 1.653603914140569 0.0 7 2.677250731224106E-4 0.0 0.0 1.9669761122303506 0.0 8 2.677250731224106E-4 0.0 0.0 2.4867643416975107 0.0 9 2.677250731224106E-4 0.0 0.0 2.6801957070284526 0.0 10 2.677250731224106E-4 0.0 0.0 3.150722523041089 0.0 11 2.677250731224106E-4 0.0 0.0 3.770639929856031 0.0 12 2.677250731224106E-4 0.0 0.0 4.305554625954607 0.0 13 2.677250731224106E-4 0.0 0.0 4.516655846111628 0.0 14 2.677250731224106E-4 0.0 0.0 4.605942157997952 0.0 15 2.677250731224106E-4 0.0 0.0 4.770860803041357 0.0 16 2.677250731224106E-4 0.0 0.0 5.098556292543187 0.0 17 2.677250731224106E-4 0.0 0.0 5.464001017355278 0.0 18 2.677250731224106E-4 0.0 0.0 5.926763806247364 0.0 19 2.677250731224106E-4 0.0 0.0 6.17173224815437 0.0 20 2.677250731224106E-4 0.0 0.0 6.458465801468472 0.0 21 2.677250731224106E-4 0.0 0.0 6.774515250289478 0.0 22 2.677250731224106E-4 0.0 0.0 7.128180071884183 0.0 23 2.677250731224106E-4 0.0 0.0 7.470198852798061 0.0 24 2.677250731224106E-4 0.0 0.0 7.7475620285528795 0.0 25 4.015876096836159E-4 0.0 0.0 7.9865066563146305 0.0 26 4.015876096836159E-4 0.0 0.0 8.212065030420261 0.0 27 4.015876096836159E-4 0.0 0.0 8.47189221388556 0.0 28 4.015876096836159E-4 0.0 0.0 8.7184670062313 0.0 29 4.015876096836159E-4 0.0 0.0 8.970128574966367 0.0 30 4.015876096836159E-4 0.0 0.0 9.273996532960304 0.0 31 4.015876096836159E-4 0.0 0.0 9.512807298185493 0.0 32 4.015876096836159E-4 0.0 0.0 9.770224955992692 0.0 33 5.354501462448212E-4 0.0 0.0 10.010508209120054 0.0 34 5.354501462448212E-4 0.0 0.0 10.256145963709866 0.0 35 5.354501462448212E-4 0.0 0.0 10.531233476343143 0.0 36 5.354501462448212E-4 0.0 0.0 10.793871773076228 0.0 37 5.354501462448212E-4 0.0 0.0 11.06400637185674 0.0 38 6.693126828060265E-4 0.0 0.0 11.358905539901075 0.0 39 6.693126828060265E-4 0.0 0.0 11.757682036316906 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTCGTA 35 1.2111559E-7 45.000004 28 ATGCGAG 30 2.1644773E-6 45.000004 1 CGGTCTA 55 1.8189894E-12 45.000004 31 TCGAGTA 20 7.0316985E-4 45.000004 43 GCGTACG 20 7.0316985E-4 45.000004 1 ATCGAGT 20 7.0316985E-4 45.000004 42 TACGTAG 20 7.0316985E-4 45.000004 1 GTACGAG 25 3.8894897E-5 45.0 1 CGTTTTT 28670 0.0 44.591908 1 TCACGAC 60 3.6379788E-12 41.250004 25 GTTTTTT 31505 0.0 40.75067 2 TACGGGA 150 0.0 40.500004 4 GTGCTAG 650 0.0 39.115387 1 TAGCCGT 35 6.245351E-6 38.57143 44 TGTTGCG 35 6.245351E-6 38.57143 1 CGACGGT 65 9.094947E-12 38.076927 28 ACGGTCT 65 9.094947E-12 38.076927 30 CGTTAGG 95 0.0 37.894737 2 TACCACG 30 1.139539E-4 37.500004 34 TAGCGAG 30 1.139539E-4 37.500004 1 >>END_MODULE