##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935675.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 532426 Sequences flagged as poor quality 0 Sequence length 51 %GC 33 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.39617899952294 33.0 31.0 34.0 30.0 34.0 2 32.59883814839996 34.0 31.0 34.0 31.0 34.0 3 32.450387471686206 34.0 31.0 34.0 30.0 34.0 4 36.05650174859981 37.0 35.0 37.0 35.0 37.0 5 36.1046417718143 37.0 35.0 37.0 35.0 37.0 6 36.12540146424104 37.0 36.0 37.0 35.0 37.0 7 36.2793345929763 37.0 37.0 37.0 35.0 37.0 8 36.08386329743476 37.0 37.0 37.0 35.0 37.0 9 37.91806748731279 39.0 39.0 39.0 35.0 39.0 10 37.725513029040656 39.0 38.0 39.0 35.0 39.0 11 37.66101016854925 39.0 37.0 39.0 35.0 39.0 12 37.67563943158298 39.0 38.0 39.0 35.0 39.0 13 37.701196034754126 39.0 38.0 39.0 35.0 39.0 14 39.120820545953805 41.0 39.0 41.0 35.0 41.0 15 39.22167399788891 41.0 39.0 41.0 35.0 41.0 16 39.25646756544572 41.0 39.0 41.0 35.0 41.0 17 39.22096404007318 41.0 39.0 41.0 35.0 41.0 18 38.56896545247602 39.0 39.0 41.0 35.0 41.0 19 37.88696457348063 37.0 37.0 41.0 35.0 41.0 20 37.081568142802944 37.0 35.0 41.0 34.0 41.0 21 37.044533888277435 37.0 35.0 41.0 34.0 41.0 22 37.03006802823303 37.0 35.0 41.0 34.0 41.0 23 37.05125219279299 37.0 35.0 40.0 34.0 41.0 24 36.89998797955021 37.0 35.0 41.0 34.0 41.0 25 36.81143107211143 36.0 35.0 40.0 34.0 41.0 26 36.658472726726345 36.0 35.0 40.0 33.0 41.0 27 36.57186538598791 36.0 35.0 40.0 33.0 41.0 28 36.449311265790925 36.0 35.0 40.0 33.0 41.0 29 36.21520924973611 36.0 35.0 40.0 33.0 41.0 30 35.68781201519084 36.0 35.0 40.0 31.0 41.0 31 35.05372577597638 36.0 35.0 40.0 25.0 41.0 32 34.049199325352255 36.0 34.0 40.0 18.0 41.0 33 32.9247069076266 36.0 33.0 40.0 12.0 41.0 34 32.00729303227115 36.0 31.0 40.0 8.0 41.0 35 31.463330115358755 36.0 27.0 40.0 7.0 41.0 36 31.099027846123217 35.0 24.0 40.0 7.0 41.0 37 30.896759361864373 35.0 23.0 40.0 7.0 41.0 38 30.74637977859834 35.0 23.0 40.0 7.0 41.0 39 30.620420490359223 35.0 23.0 40.0 7.0 41.0 40 30.501513825395453 35.0 22.0 40.0 7.0 41.0 41 30.344754012764216 35.0 21.0 40.0 7.0 41.0 42 30.215340723405696 35.0 21.0 40.0 7.0 41.0 43 30.0770247884213 35.0 20.0 40.0 7.0 41.0 44 29.937170611502818 35.0 20.0 40.0 7.0 41.0 45 29.910490847554403 35.0 20.0 40.0 7.0 41.0 46 29.89583153339619 35.0 20.0 40.0 7.0 41.0 47 29.934597483969604 35.0 20.0 40.0 7.0 41.0 48 29.908248282390417 35.0 20.0 40.0 7.0 41.0 49 29.909333879262096 35.0 20.0 40.0 7.0 41.0 50 29.819655689241323 35.0 20.0 40.0 7.0 41.0 51 29.22862144222859 35.0 20.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 4.0 10 6.0 11 9.0 12 8.0 13 6.0 14 23.0 15 21.0 16 41.0 17 131.0 18 265.0 19 478.0 20 792.0 21 1355.0 22 2017.0 23 3694.0 24 7223.0 25 15122.0 26 26429.0 27 33698.0 28 30026.0 29 23351.0 30 17777.0 31 14860.0 32 13776.0 33 14855.0 34 21947.0 35 33422.0 36 36564.0 37 33710.0 38 65114.0 39 135566.0 40 132.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.227780010743277 13.879675297600041 15.946441383403515 45.946103308253164 2 57.62077734746237 15.374906559784835 16.046173552756628 10.95814253999617 3 20.141953999241206 14.826473538106704 54.163583296082464 10.867989166569627 4 18.25568247981879 16.683257391637525 53.36553812172959 11.695522006814093 5 16.13520000901534 18.766551595902527 52.664783462866204 12.433464932215932 6 16.72232385345569 21.74536930953785 51.83067693914272 9.701629897863741 7 51.392493980384124 3.7960204798413297 41.81257113664622 2.998914403128322 8 51.915007907202124 2.9872695923940604 41.731433100562334 3.36628939984148 9 48.189044111294336 4.984542452847907 42.961463189250715 3.86495024660704 10 23.299763723033813 21.298546652492554 47.32037879442401 8.081310830049622 11 15.823983051165797 15.793180648578394 55.64810884517285 12.73472745508296 12 16.10571234312374 14.339081863019462 57.050745080067465 12.504460713789333 13 14.8204633132116 15.407587157651955 56.974302532182875 12.797646996953569 14 11.949078369576242 17.918358607581148 56.015483841886 14.117079180956601 15 11.626780059576355 17.630994729784042 58.21954600263699 12.522679208002616 16 13.185494322215668 17.110546817773738 56.489352510959264 13.214606349051325 17 12.679508513859203 16.87821406167242 54.99975583461364 15.44252158985474 18 12.899069542058427 17.261365898735225 56.270167121815994 13.569397437390359 19 13.893198303614025 17.51097805140996 55.020603802218524 13.575219842757491 20 15.124167489942264 17.464586628000887 55.4655482639841 11.945697618072746 21 14.708710694068284 17.59098917032602 55.672713203337175 12.027586932268521 22 13.204276275012866 15.973111756375532 55.32261760319744 15.49999436541416 23 12.598182658247342 17.111298095885623 55.52170630284772 14.768812943019311 24 13.669693065327387 16.16036782576358 55.81770987893153 14.352229229977498 25 12.921795704943035 17.640761345238587 54.67464023169417 14.76280271812421 26 12.796144440729792 18.803739862440978 54.21748750061042 14.182628196218817 27 13.696363438299407 17.980339051811896 55.126158376938776 13.197139132949932 28 12.36810373648169 17.64752284824558 55.662195309770745 14.322178105501985 29 13.902777099540595 16.332222693857926 54.46484581894949 15.300154387651993 30 14.17417631746008 17.594182102301538 53.867767539526625 14.36387404071176 31 14.856149023526275 18.98122931637448 51.40601698639811 14.756604673701135 32 14.900474432127659 19.909996882195834 49.75301732071687 15.436511364959637 33 15.068572909662564 21.52205189077919 47.83650685729096 15.572868342267283 34 15.321377994312824 22.235953916600618 45.53252470765891 16.910143381427652 35 15.539436466288272 23.032120895673767 43.85999181106858 17.568450826969382 36 18.05640596064054 24.581444181914485 41.67583852028263 15.686311337162348 37 16.99372307137518 25.611258653784752 41.60916258785258 15.785855686987487 38 16.260287814644663 24.94393587090037 40.615597284880906 18.180179029574063 39 17.247279434137326 24.045782888138444 40.98297228159406 17.72396539613017 40 16.701475885850805 24.556652004222183 42.0022688598979 16.739603250029113 41 16.074534301480394 25.810910812018946 40.19243988836007 17.922114998140586 42 17.942211687633584 25.34605748028834 39.37523712215407 17.33649370992401 43 18.270708042056548 24.60792673535853 39.28113953864011 17.84022568394481 44 16.740166708613028 24.664084774222143 39.62146852332531 18.97427999383952 45 16.85792955265145 23.71691089465954 40.04162080739859 19.383538745290423 46 17.156374782598895 24.238110084781734 41.27784894051004 17.327666192109326 47 15.910192214504926 23.537731064974288 43.34311247008974 17.20896425043105 48 15.862861693455994 22.574780345062038 43.19511068204783 18.36724727943414 49 16.238688568927888 21.815613812999366 43.96836367870841 17.977333939364343 50 15.504126395029544 21.623474435884045 43.78317362412805 19.08922554495836 51 15.001521338176573 21.778425546460916 42.22915484968803 20.990898265674478 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 144.0 1 299.0 2 454.0 3 33463.5 4 66473.0 5 44008.0 6 21543.0 7 20302.0 8 19061.0 9 18269.0 10 17477.0 11 16730.0 12 15983.0 13 15331.0 14 14679.0 15 13264.0 16 11849.0 17 10527.0 18 9205.0 19 8404.5 20 7604.0 21 6917.0 22 6230.0 23 5786.5 24 5343.0 25 5218.5 26 5510.5 27 5927.0 28 6175.5 29 6424.0 30 6962.0 31 7500.0 32 7927.5 33 8355.0 34 9816.0 35 11277.0 36 12002.0 37 12727.0 38 13531.0 39 14335.0 40 15616.0 41 16897.0 42 19141.5 43 21386.0 44 23606.0 45 25826.0 46 28820.5 47 31815.0 48 35000.0 49 38185.0 50 36353.5 51 34522.0 52 28961.0 53 23400.0 54 20239.0 55 17078.0 56 15193.5 57 13309.0 58 12297.0 59 11285.0 60 10527.0 61 9769.0 62 8439.5 63 7110.0 64 6200.5 65 5291.0 66 4337.0 67 3383.0 68 2701.5 69 2020.0 70 1704.0 71 1388.0 72 1189.0 73 990.0 74 760.0 75 404.0 76 278.0 77 225.5 78 173.0 79 127.5 80 82.0 81 50.0 82 18.0 83 11.0 84 4.0 85 2.5 86 1.0 87 1.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 532426.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.39859920666007 #Duplication Level Percentage of deduplicated Percentage of total 1 79.07552656724019 33.526915579800175 2 8.618024292789467 7.307843158864815 3 3.0290739537345885 3.852854775951781 4 1.5376682267338186 2.6077991543241152 5 1.0120172342386529 2.1454056552358636 6 0.7990953331849081 2.032831365577165 7 0.6426114870880787 1.9072078820650282 8 0.5490319344921499 1.8622547953751931 9 0.5270560698151388 2.0111795157176564 >10 4.067271165602311 28.065981244573262 >50 0.10104377469705 3.0214381020480534 >100 0.03755609324980157 2.7033520781065166 >500 0.0026825780892715404 0.7546486657977731 >1k 8.941926964238468E-4 0.43656264188200744 >5k 0.0 0.0 >10k+ 4.470963482119234E-4 7.763725384680632 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 40956 7.692336587619689 No Hit GCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 1180 0.2216270430069155 RNA PCR Primer, Index 27 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 1123 0.21092132991251367 RNA PCR Primer, Index 38 (96% over 25bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 769 0.14443321701043899 No Hit CTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGCT 769 0.14443321701043899 RNA PCR Primer, Index 38 (96% over 26bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 691 0.12978329382862594 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 620 0.11644810734261661 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA 599 0.11250389725520542 No Hit TCTGTCTCTTATACACATCTGACGCGAGCTATGTCGTATGCCGTCTTCTGC 533 0.1001078084090559 RNA PCR Primer, Index 27 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.878195279719623E-4 0.0 0.0 0.1510069004894577 0.0 2 1.878195279719623E-4 0.0 0.0 0.7755068309962323 0.0 3 1.878195279719623E-4 0.0 0.0 1.1098255907863253 0.0 4 1.878195279719623E-4 0.0 0.0 1.5179574250693992 0.0 5 1.878195279719623E-4 0.0 0.0 2.560731444369734 0.0 6 1.878195279719623E-4 0.0 0.0 3.0757325900688546 0.0 7 1.878195279719623E-4 0.0 0.0 3.6298001975861434 0.0 8 1.878195279719623E-4 0.0 0.0 4.475175892987946 0.0 9 1.878195279719623E-4 0.0 0.0 4.755026989666169 0.0 10 1.878195279719623E-4 0.0 0.0 5.4285478169736265 0.0 11 1.878195279719623E-4 0.0 0.0 6.54588618887883 0.0 12 1.878195279719623E-4 0.0 0.0 7.491745331745633 0.0 13 1.878195279719623E-4 0.0 0.0 7.835830706990267 0.0 14 1.878195279719623E-4 0.0 0.0 7.97012166949022 0.0 15 1.878195279719623E-4 0.0 0.0 8.21804344641321 0.0 16 1.878195279719623E-4 0.0 0.0 8.727034367217229 0.0 17 1.878195279719623E-4 0.0 0.0 9.424596094105096 0.0 18 1.878195279719623E-4 0.0 0.0 10.135493007478974 0.0 19 1.878195279719623E-4 0.0 0.0 10.563721531255048 0.0 20 1.878195279719623E-4 0.0 0.0 10.989696220695459 0.0 21 1.878195279719623E-4 0.0 0.0 11.505073005450523 0.0 22 1.878195279719623E-4 0.0 0.0 12.095953240450315 0.0 23 1.878195279719623E-4 0.0 0.0 12.656594531446624 0.0 24 1.878195279719623E-4 0.0 0.0 13.08407177711081 0.0 25 1.878195279719623E-4 0.0 0.0 13.455015344855436 0.0 26 1.878195279719623E-4 0.0 0.0 13.791775758509164 0.0 27 1.878195279719623E-4 0.0 0.0 14.140556621953097 0.0 28 1.878195279719623E-4 0.0 0.0 14.508870716306117 0.0 29 1.878195279719623E-4 0.0 0.0 14.879250825466826 0.0 30 1.878195279719623E-4 0.0 0.0 15.305413334435208 0.0 31 1.878195279719623E-4 0.0 0.0 15.698707426008497 0.0 32 1.878195279719623E-4 0.0 0.0 16.066270242249626 0.0 33 1.878195279719623E-4 0.0 0.0 16.432706141322925 0.0 34 1.878195279719623E-4 0.0 0.0 16.775476779871756 0.0 35 3.756390559439246E-4 0.0 0.0 17.162197187966026 0.0 36 5.634585839158869E-4 0.0 0.0 17.530511282319047 0.0 37 5.634585839158869E-4 0.0 0.0 17.883799814434305 0.0 38 5.634585839158869E-4 0.0 0.0 18.23445887315796 0.0 39 5.634585839158869E-4 0.0 0.0 18.61084920721377 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAGACCG 25 3.887974E-5 45.000004 9 TGCGTAG 25 3.887974E-5 45.000004 1 CCACACG 25 3.887974E-5 45.000004 27 TTGTGCG 20 7.029873E-4 45.0 1 CGCGCCC 20 7.029873E-4 45.0 22 GTTAGCG 20 7.029873E-4 45.0 1 GTTACCG 20 7.029873E-4 45.0 38 TATTCGG 20 7.029873E-4 45.0 2 TATCGTG 20 7.029873E-4 45.0 1 TAATCCG 20 7.029873E-4 45.0 1 CGTTTTT 19620 0.0 44.587154 1 GCTACGA 80 0.0 42.1875 10 AGCTACG 80 0.0 42.1875 9 CGAATAT 75 0.0 42.000004 14 GACCGAT 110 0.0 40.909092 9 GTTTTTT 21550 0.0 40.75058 2 GGAACGT 45 1.9250365E-8 40.0 8 ATTGGGC 45 1.9250365E-8 40.0 4 TAGGGCG 120 0.0 39.375004 5 ATAACGG 40 3.4535697E-7 39.375 2 >>END_MODULE