##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935674.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 307271 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.336806922879155 33.0 31.0 34.0 30.0 34.0 2 32.543741518073624 34.0 31.0 34.0 31.0 34.0 3 32.39208386082644 34.0 31.0 34.0 30.0 34.0 4 36.03362504108751 37.0 35.0 37.0 35.0 37.0 5 36.03288627953826 37.0 35.0 37.0 35.0 37.0 6 36.037169143850214 37.0 35.0 37.0 35.0 37.0 7 36.15721626837547 37.0 37.0 37.0 35.0 37.0 8 35.77229872002239 37.0 35.0 37.0 35.0 37.0 9 37.650738273380824 39.0 38.0 39.0 35.0 39.0 10 37.580331368726625 39.0 37.0 39.0 35.0 39.0 11 37.581991141370324 39.0 37.0 39.0 35.0 39.0 12 37.51338395097487 39.0 37.0 39.0 35.0 39.0 13 37.48374236423223 39.0 37.0 39.0 35.0 39.0 14 38.891584301805246 41.0 38.0 41.0 35.0 41.0 15 38.95373790562728 41.0 38.0 41.0 35.0 41.0 16 39.05729144631287 41.0 39.0 41.0 35.0 41.0 17 38.93697745638215 41.0 38.0 41.0 35.0 41.0 18 38.32747965151283 39.0 38.0 40.0 35.0 41.0 19 37.63026123519629 37.0 37.0 40.0 35.0 41.0 20 36.68815801035568 36.0 35.0 40.0 34.0 41.0 21 36.687656824106405 36.0 35.0 40.0 33.0 41.0 22 36.65312378974912 35.0 35.0 40.0 33.0 41.0 23 36.583279906011306 35.0 35.0 40.0 33.0 41.0 24 36.521230444786525 35.0 35.0 40.0 33.0 41.0 25 36.485685274562194 35.0 35.0 40.0 33.0 41.0 26 36.27437994473934 35.0 35.0 40.0 33.0 41.0 27 36.10536952722515 35.0 35.0 40.0 33.0 41.0 28 35.95196422701785 35.0 35.0 40.0 33.0 41.0 29 35.68989263549115 35.0 35.0 40.0 31.0 41.0 30 35.19050935493424 35.0 35.0 40.0 30.0 41.0 31 34.56389636509791 35.0 35.0 40.0 23.0 41.0 32 33.36038545778808 35.0 33.0 40.0 16.0 41.0 33 32.17274978764674 35.0 31.0 40.0 10.0 41.0 34 31.138600779116807 35.0 25.0 40.0 7.0 41.0 35 30.48316632549118 35.0 23.0 40.0 7.0 41.0 36 30.156597921704293 35.0 21.0 40.0 7.0 41.0 37 29.914030285969062 35.0 20.0 40.0 7.0 41.0 38 29.838858857490617 35.0 20.0 40.0 7.0 41.0 39 29.67893162713045 35.0 18.0 40.0 7.0 41.0 40 29.526362722157312 35.0 18.0 40.0 7.0 41.0 41 29.334486495634145 35.0 18.0 40.0 7.0 41.0 42 29.122917554861996 35.0 18.0 40.0 7.0 41.0 43 29.088007003589667 35.0 18.0 40.0 7.0 41.0 44 29.064636753875245 35.0 18.0 40.0 7.0 41.0 45 29.057760088000496 35.0 18.0 40.0 7.0 41.0 46 29.056777242238937 35.0 18.0 40.0 7.0 41.0 47 28.953005652990356 35.0 18.0 40.0 7.0 41.0 48 28.913245962033514 35.0 18.0 40.0 7.0 41.0 49 28.888642273432897 35.0 18.0 40.0 7.0 41.0 50 28.783803222562494 35.0 18.0 39.0 7.0 41.0 51 28.16876307884571 34.0 18.0 38.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 3.0 10 6.0 11 4.0 12 8.0 13 7.0 14 8.0 15 23.0 16 35.0 17 90.0 18 191.0 19 419.0 20 740.0 21 1367.0 22 2075.0 23 3309.0 24 5713.0 25 10272.0 26 16708.0 27 20511.0 28 17924.0 29 13650.0 30 10258.0 31 8953.0 32 8586.0 33 9316.0 34 13866.0 35 19914.0 36 21389.0 37 20725.0 38 36624.0 39 64497.0 40 76.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.292477975467907 11.577076912562525 13.032795154765664 45.0976499572039 2 56.67960855401258 19.91629538745928 13.233920545707209 10.17017551282093 3 17.88746741475766 20.781004390261366 51.41812927350775 9.913398921473227 4 17.450068506302255 14.92168151241087 56.65747825209668 10.970771729190194 5 20.31984795180801 16.857106593202744 50.39753182044514 12.4255136345441 6 15.233458412931908 25.11854356577744 50.64649771699901 9.001500304291651 7 45.554901048260334 4.093780408824784 47.15348991606758 3.197828626847311 8 45.09732451158749 8.61422002076343 42.5210970120838 3.7673584555652826 9 41.59878413517709 5.051892303536618 43.4434098889905 9.90591367229579 10 27.137608169986756 15.362660322646784 48.112578147628646 9.387153359737821 11 21.821454025924997 15.644170780841668 50.70182347178874 11.832551721444588 12 17.90081068503048 13.203328657764644 53.59405866482682 15.301801992378063 13 17.26391361371558 14.602419362712393 55.460489274939704 12.673177748632314 14 12.438531459200512 20.48582521617725 52.80582938188114 14.269813942741097 15 10.99160024864045 16.374796189682723 58.00937934266494 14.624224219011882 16 12.218530222507168 16.07994246121502 55.000634618952006 16.700892697325813 17 12.203234278535884 18.25749908061613 54.45486232023198 15.084404320616004 18 12.749332022872316 16.843437877313512 53.77370464508529 16.633525454728886 19 14.037445772624165 16.873704319639668 52.48689267779908 16.601957229937092 20 17.714655792443804 16.16293109339964 54.22184325888223 11.900569855274334 21 15.097096699656005 19.126764322047965 53.45509338661964 12.321045591676402 22 13.684988170051843 15.615531566597562 55.22909744167202 15.470382821678582 23 15.15209700882934 17.88909464283971 53.55077439784425 13.408033950486702 24 14.645703629694959 17.07027347195147 53.321660683891416 14.962362214462152 25 13.392412560899011 20.290883291947498 51.971386821405204 14.34531732574828 26 13.214719254339002 17.331606301928918 54.14015640916324 15.313518034568832 27 15.95985302875963 18.172883220349465 52.07487852742367 13.792385223467232 28 12.523147319467181 19.056142623286938 53.85897139658478 14.561738660661112 29 15.378281712234475 16.195475655040664 53.33370217169859 15.09254046102626 30 14.325139697530846 20.26972932688083 51.27851310406775 14.12661787152058 31 16.02168769587758 18.281907501846902 47.79396688916299 17.90243791311253 32 17.814242151065347 21.820803134692177 46.35159191723267 14.013362797009806 33 17.835070670515606 21.672725379225504 43.519238717614094 16.9729652326448 34 18.885934565904364 21.939265339065518 41.90112311282223 17.27367698220789 35 18.49312170689717 23.573978670294302 40.46883695500064 17.464062667807895 36 18.685785511812046 26.976838035480082 37.76438388263129 16.57299257007658 37 16.84181064923146 27.682729577473957 39.243208763599554 16.232251009695027 38 17.320541150970968 25.205762990975394 37.144409983369734 20.32928587468391 39 19.564163230503368 26.585001513322116 37.032131245708186 16.81870401046633 40 19.318451790113613 23.8750158654738 39.49054743207137 17.31598491234122 41 17.308174217547375 26.592161316883146 37.370594686774865 18.729069778794617 42 17.02113118387352 25.33724302000514 39.690045594930865 17.95158020119048 43 18.84525386385308 26.53293021469647 36.84695268997074 17.774863231479703 44 18.3134757266387 24.80579032840717 38.115214257121565 18.765519687832565 45 17.53110446478841 23.353001096751726 37.528435810733846 21.587458627726015 46 19.297297825046947 25.54032108464515 37.67456089250206 17.487820197805846 47 16.68266774280684 24.366764191869716 42.151065346225316 16.799502719098125 48 17.086545752771983 23.547617575365067 40.01581665695754 19.350020014905407 49 16.086776819159635 21.99491653947167 43.278083515854085 18.64022312551461 50 16.531986422408885 22.165124596854245 41.90112311282223 19.40176586791464 51 15.92340311972168 22.36852810711066 39.88531296477702 21.82275580839064 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 85.0 1 179.5 2 274.0 3 18258.5 4 36243.0 5 24267.5 6 12292.0 7 11730.5 8 11169.0 9 10648.0 10 10127.0 11 9692.5 12 9258.0 13 8700.5 14 8143.0 15 7484.0 16 6825.0 17 6282.0 18 5739.0 19 5127.0 20 4515.0 21 4128.0 22 3741.0 23 3454.5 24 3168.0 25 2994.0 26 2735.5 27 2651.0 28 2783.0 29 2915.0 30 3340.0 31 3765.0 32 3963.5 33 4162.0 34 4437.0 35 4712.0 36 5167.0 37 5622.0 38 6112.5 39 6603.0 40 7259.5 41 7916.0 42 8476.5 43 9037.0 44 10567.0 45 12097.0 46 19015.0 47 25933.0 48 22405.0 49 18877.0 50 18595.5 51 18314.0 52 15803.5 53 13293.0 54 12477.0 55 11661.0 56 10789.5 57 9918.0 58 9137.0 59 8356.0 60 8148.0 61 7940.0 62 7240.5 63 6541.0 64 5433.5 65 4326.0 66 3505.0 67 2684.0 68 2329.0 69 1974.0 70 1727.0 71 1480.0 72 1225.5 73 971.0 74 755.0 75 432.5 76 326.0 77 237.5 78 149.0 79 99.5 80 50.0 81 48.0 82 46.0 83 27.5 84 9.0 85 5.5 86 2.0 87 2.0 88 2.0 89 1.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 307271.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.11433818138803 #Duplication Level Percentage of deduplicated Percentage of total 1 80.94700901874423 36.518707396434934 2 7.062485505083314 6.372387189549593 3 2.6067683002784623 3.5280787997785374 4 1.5557387656830672 2.807444991876843 5 1.1457067480658631 2.5843900844470835 6 0.9937672035469459 2.689988981663351 7 0.8512996143700648 2.6884073087463425 8 0.7748202112402554 2.796440083173391 9 0.6338872492638549 2.573766335894342 >10 3.3261414189311314 22.05218220093254 >50 0.07260706722895167 2.2490405446046267 >100 0.023234261513264538 2.266401329466853 >500 0.002904282689158067 0.8926063915012536 >1k 0.002904282689158067 3.065980119064857 >5k 0.0 0.0 >10k+ 7.260706722895168E-4 6.91417824286549 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21108 6.869506071187974 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGC 3297 1.0729941973046595 No Hit GAATCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTC 3015 0.9812185334769633 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCG 1959 0.6375479625477185 No Hit GCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTGC 1089 0.35441027627078375 TruSeq Adapter, Index 15 (95% over 21bp) GAATGCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTT 797 0.25938015627898503 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACAGGTAT 779 0.2535221351836002 No Hit GAATGACTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCT 577 0.18778212066872565 No Hit CCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTGC 572 0.1861548925866743 TruSeq Adapter, Index 15 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCT 484 0.15751567834257058 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 468 0.15230854848000625 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTC 452 0.14710141861744191 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGACAGGTATCGTA 411 0.13375814834462085 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 393 0.12790012724923602 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 380 0.12366933423590251 No Hit CTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTGCT 375 0.12204210615385117 TruSeq Adapter, Index 21 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12659834478359494 0.0 2 0.0 0.0 0.0 0.7869275004800322 0.0 3 0.0 0.0 0.0 1.0437040918277352 0.0 4 0.0 0.0 0.0 1.451487449189803 0.0 5 0.0 0.0 0.0 3.1320886123324363 0.0 6 0.0 0.0 0.0 3.76442944501759 0.0 7 0.0 0.0 0.0 4.312479863052484 0.0 8 0.0 0.0 0.0 5.006004471622769 0.0 9 0.0 0.0 0.0 5.208106199413547 0.0 10 0.0 0.0 0.0 6.3214556531530794 0.0 11 0.0 0.0 0.0 7.049152051446443 0.0 12 0.0 0.0 0.0 8.754487081436256 0.0 13 0.0 0.0 0.0 9.080258143462936 0.0 14 0.0 0.0 0.0 9.243957288517302 0.0 15 0.0 0.0 0.0 9.586651522597316 0.0 16 3.254456164102698E-4 0.0 0.0 10.032186571462976 0.0 17 3.254456164102698E-4 0.0 0.0 10.483254195807609 0.0 18 3.254456164102698E-4 0.0 0.0 10.923256669194295 0.0 19 3.254456164102698E-4 0.0 0.0 11.515893136677395 0.0 20 3.254456164102698E-4 0.0 0.0 11.838084296923563 0.0 21 3.254456164102698E-4 0.0 0.0 12.196074474974859 0.0 22 3.254456164102698E-4 0.0 0.0 12.617851993842569 0.0 23 3.254456164102698E-4 0.0 0.0 12.998297919426173 0.0 24 3.254456164102698E-4 0.0 0.0 13.311051156796443 0.0 25 3.254456164102698E-4 0.0 0.0 13.578242007869274 0.0 26 3.254456164102698E-4 0.0 0.0 13.8864390066098 0.0 27 3.254456164102698E-4 0.0 0.0 14.17576015959853 0.0 28 3.254456164102698E-4 0.0 0.0 14.44034744574008 0.0 29 3.254456164102698E-4 0.0 0.0 14.700703938868296 0.0 30 3.254456164102698E-4 0.0 0.0 14.98319073391241 0.0 31 3.254456164102698E-4 0.0 0.0 15.266328420189344 0.0 32 3.254456164102698E-4 0.0 0.0 15.534495608111406 0.0 33 3.254456164102698E-4 0.0 0.0 15.837160031372957 0.0 34 3.254456164102698E-4 0.0 0.0 16.122250391348352 0.0 35 3.254456164102698E-4 0.0 0.0 16.405713523241698 0.0 36 3.254456164102698E-4 0.0 0.0 16.706750718421198 0.0 37 3.254456164102698E-4 0.0 0.0 16.97361612387762 0.0 38 3.254456164102698E-4 0.0 0.0 17.240806974950452 0.0 39 3.254456164102698E-4 0.0 0.0 17.497909011914565 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGGCA 45 3.8198777E-10 45.000004 5 CGCACGG 35 1.2080454E-7 45.000004 2 TGCACGG 30 2.1602918E-6 45.000004 2 TGGACGG 25 3.8841128E-5 45.0 2 TACGGCC 20 7.025211E-4 45.0 7 ACGGGTC 20 7.025211E-4 45.0 5 CCTCGAT 20 7.025211E-4 45.0 15 TACGCGG 20 7.025211E-4 45.0 2 TACGAAT 20 7.025211E-4 45.0 12 CGAATAT 20 7.025211E-4 45.0 14 TCGTAAG 20 7.025211E-4 45.0 42 GCTACGG 25 3.8841128E-5 45.0 2 AGCTACG 20 7.025211E-4 45.0 9 ATGGGCT 55 1.8189894E-12 44.999996 5 CGTTTTT 11415 0.0 44.36925 1 GATGAAT 475 0.0 44.05263 20 ATGAATG 470 0.0 43.085106 21 CGATGAA 510 0.0 42.35294 19 CCGATGA 505 0.0 42.326733 18 ACCGATG 505 0.0 42.326733 17 >>END_MODULE