##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935673.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 533496 Sequences flagged as poor quality 0 Sequence length 51 %GC 33 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.531160496048706 34.0 31.0 34.0 31.0 34.0 2 32.73467654865266 34.0 31.0 34.0 31.0 34.0 3 32.557616177065995 34.0 31.0 34.0 31.0 34.0 4 36.14943129845397 37.0 37.0 37.0 35.0 37.0 5 36.1772478144166 37.0 37.0 37.0 35.0 37.0 6 36.1906199859043 37.0 37.0 37.0 35.0 37.0 7 36.31315323826233 37.0 37.0 37.0 35.0 37.0 8 36.084673549567384 37.0 37.0 37.0 35.0 37.0 9 37.90151003943797 39.0 38.0 39.0 35.0 39.0 10 37.7817640619611 39.0 38.0 39.0 35.0 39.0 11 37.7651416318023 39.0 38.0 39.0 35.0 39.0 12 37.69272122002789 39.0 38.0 39.0 35.0 39.0 13 37.68959279919625 39.0 38.0 39.0 35.0 39.0 14 39.14331878776973 41.0 39.0 41.0 35.0 41.0 15 39.227163840028794 41.0 39.0 41.0 35.0 41.0 16 39.258183753955045 41.0 39.0 41.0 35.0 41.0 17 39.204681947006165 41.0 39.0 41.0 35.0 41.0 18 38.4804103498433 39.0 39.0 40.0 35.0 41.0 19 37.72081140252223 37.0 37.0 40.0 35.0 41.0 20 36.84919474560259 35.0 35.0 40.0 34.0 41.0 21 36.80382983190127 35.0 35.0 40.0 34.0 41.0 22 36.79484757149069 35.0 35.0 40.0 34.0 41.0 23 36.801505540810055 35.0 35.0 40.0 34.0 41.0 24 36.62690629358046 35.0 35.0 40.0 34.0 41.0 25 36.54180912321742 35.0 35.0 40.0 34.0 41.0 26 36.37069256376805 35.0 35.0 40.0 33.0 41.0 27 36.29122242715972 35.0 35.0 40.0 33.0 41.0 28 36.12541612308246 35.0 35.0 40.0 33.0 41.0 29 35.79872951249869 35.0 35.0 40.0 33.0 41.0 30 35.217092536776285 35.0 35.0 40.0 30.0 41.0 31 34.4418046245895 35.0 35.0 40.0 22.0 41.0 32 33.23417607629673 35.0 33.0 40.0 15.0 41.0 33 31.953364223911706 35.0 31.0 40.0 10.0 41.0 34 30.868220192841182 35.0 23.0 40.0 7.0 41.0 35 30.227568716541455 35.0 21.0 40.0 7.0 41.0 36 29.85011508989758 35.0 20.0 40.0 7.0 41.0 37 29.64670775413499 35.0 18.0 40.0 7.0 41.0 38 29.470764541814745 35.0 18.0 40.0 7.0 41.0 39 29.3289846596788 35.0 18.0 40.0 7.0 41.0 40 29.214125316778382 35.0 18.0 40.0 7.0 41.0 41 29.057288152113607 35.0 18.0 40.0 7.0 41.0 42 28.93608199499153 35.0 18.0 40.0 7.0 41.0 43 28.80605477829262 35.0 18.0 40.0 7.0 41.0 44 28.672158741583818 35.0 18.0 40.0 7.0 41.0 45 28.614336377404893 35.0 18.0 40.0 7.0 41.0 46 28.58069226385952 35.0 18.0 40.0 7.0 41.0 47 28.60858563138243 35.0 18.0 40.0 7.0 41.0 48 28.581550752020632 35.0 18.0 40.0 7.0 41.0 49 28.56185238502257 35.0 18.0 39.0 7.0 41.0 50 28.471388726438438 35.0 18.0 39.0 7.0 41.0 51 27.897285078051194 34.0 18.0 38.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 2.0 8 6.0 9 7.0 10 12.0 11 12.0 12 8.0 13 13.0 14 19.0 15 36.0 16 70.0 17 141.0 18 287.0 19 547.0 20 896.0 21 1491.0 22 2383.0 23 4078.0 24 8234.0 25 17335.0 26 31001.0 27 37946.0 28 35104.0 29 26334.0 30 19479.0 31 15929.0 32 14161.0 33 15101.0 34 24255.0 35 34728.0 36 34952.0 37 34053.0 38 61205.0 39 113552.0 40 117.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.312272256961627 12.513308440925519 13.397851155397603 49.77656814671525 2 61.53616896846462 14.345187217898541 13.932250663547618 10.186393150089222 3 19.85825573200174 14.317445679067884 55.57173811987344 10.252560469056938 4 18.139030095820775 15.175371511688935 55.21522185733352 11.470376535156777 5 15.209673549567382 17.75420996596038 54.336114984929594 12.70000149954264 6 15.961319297614226 20.480753370222082 54.63621095565853 8.921716376505167 7 47.65284088353052 3.7269257876347717 45.429581477649315 3.1906518511853887 8 47.55180919819455 3.777347908887789 45.55348118823759 3.117361704680073 9 43.87080690389431 5.083636990717831 46.693508479913625 4.35204762547423 10 24.803559914226163 15.073590055033215 50.73402612203278 9.388823908707844 11 18.9231034534467 15.2707799121268 53.92823938698697 11.87787724743953 12 18.157024607494716 13.099067284478233 56.354311934859865 12.389596173167185 13 15.507145320677193 13.910132409615066 57.22929506500517 13.353427204702568 14 12.752298049095026 15.80367987763732 57.20980101069174 14.234221062575914 15 12.422211225576199 15.25222307196305 59.53071813097005 12.794847571490694 16 14.191671540180245 14.736005518316913 58.42780451962152 12.644518421881326 17 13.837966920089373 15.152690929266575 56.682711772909265 14.326630377734793 18 14.629537990912771 15.570500997195854 56.54981480648402 13.25014620540735 19 15.480340995996222 16.38437776478174 55.46995666321772 12.66532457600432 20 16.861044881311198 15.459159956213355 56.03284748151813 11.646947680957307 21 15.9245805029466 15.431980745872508 56.2467197504761 12.396719000704785 22 14.465900400377885 14.960936914241158 56.5151378829457 14.058024802435257 23 14.952501986894 15.117264234408506 56.68064990177996 13.249583876917539 24 15.092709223686777 14.040780062081065 57.044288991857485 13.822221722374675 25 14.771994541664792 14.82597807668661 55.62103558414684 14.78099179750176 26 13.518939223536822 16.65916895346919 55.82872223971689 13.993169583277101 27 14.146122932505586 16.131517387196904 56.17811567471921 13.5442440055783 28 13.303192526279483 16.964513323436353 56.203982785250496 13.528311365033666 29 14.320257321516937 16.291781006792927 55.597417787574784 13.790543884115344 30 15.249411429513998 15.764129440520641 54.90387931680837 14.082579813156986 31 15.522515632732018 17.81662842832936 52.24743953094306 14.41341640799556 32 16.248294270247573 19.359470361539728 50.51190636855759 13.880328999655106 33 17.131524884910103 21.016464978181652 46.7396194160781 15.112390720830145 34 16.52083614497578 23.047220597717697 44.78571535681617 15.64622790049035 35 17.014748001859434 24.235983025177323 42.10115914646033 16.648109826502917 36 17.92796946931186 26.31359935219758 39.64078456070899 16.117646617781574 37 18.793205572300447 26.296354611843388 39.734693418507355 15.175746397348808 38 18.120473255657025 25.614812482192935 39.32962946301378 16.935084799136263 39 18.647937379099375 25.09409630062831 39.103385967279976 17.154580352992337 40 18.5219757973818 25.191379129365544 39.78567786825018 16.500967205002475 41 16.477349408430428 26.577518856748693 39.26046305876707 17.684668676053803 42 17.51053428704245 26.35371211780407 38.38435527164215 17.75139832351133 43 18.08598377494864 25.16607434732407 38.791855983924904 17.95608589380239 44 17.803319987403842 25.49035044311485 38.537870949360446 18.168458620120866 45 18.024689969559287 24.345262195030514 39.13675079100874 18.49329704440146 46 17.367890293460494 24.94807833610749 39.670025642179134 18.014005728252883 47 16.87828962166539 24.311335042811944 41.45017019808958 17.360205137433084 48 17.333025927092237 22.801857933330336 42.089725133834186 17.77539100574325 49 17.021870829397034 22.49445169223387 42.41943707169313 18.064240406675964 50 15.986061751165895 22.2205977176961 42.937716496468575 18.855624034669425 51 15.966942582512333 22.29013900760268 41.99469161905619 19.748226790828795 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 123.0 1 339.0 2 555.0 3 34295.0 4 68035.0 5 46245.0 6 24455.0 7 23090.5 8 21726.0 9 20999.0 10 20272.0 11 19199.0 12 18126.0 13 17009.5 14 15893.0 15 14441.5 16 12990.0 17 11941.5 18 10893.0 19 9895.0 20 8897.0 21 7984.0 22 7071.0 23 6363.0 24 5655.0 25 5280.0 26 4889.0 27 4873.0 28 4839.5 29 4806.0 30 5214.0 31 5622.0 32 6214.0 33 6806.0 34 7753.5 35 8701.0 36 8862.5 37 9024.0 38 9573.0 39 10122.0 40 11656.0 41 13190.0 42 14457.0 43 15724.0 44 17427.5 45 19131.0 46 21141.5 47 23152.0 48 24919.5 49 26687.0 50 27283.0 51 27879.0 52 25128.0 53 22377.0 54 20789.5 55 19202.0 56 18570.5 57 17939.0 58 17650.0 59 17361.0 60 17091.0 61 16821.0 62 15540.0 63 14259.0 64 12178.0 65 10097.0 66 8474.0 67 6851.0 68 5800.5 69 4750.0 70 4036.0 71 3322.0 72 2866.0 73 2410.0 74 1878.0 75 1047.0 76 748.0 77 534.0 78 320.0 79 267.0 80 214.0 81 158.0 82 102.0 83 75.5 84 49.0 85 30.0 86 11.0 87 6.0 88 1.0 89 0.5 90 0.0 91 1.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 533496.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.42353363941134 #Duplication Level Percentage of deduplicated Percentage of total 1 80.44791169870823 35.73780511567958 2 6.979866804936326 6.201406956153988 3 2.6720187064918663 3.5610153867893337 4 1.6004321084705744 2.843873984329463 5 1.2377995905673382 2.7493715875208866 6 0.9665538174896342 2.5762641615331328 7 0.820635574020267 2.5518872419730876 8 0.726023487331089 2.5802023049964293 9 0.617352272481001 2.4682472499534103 >10 3.8045071624775098 25.53376052770886 >50 0.07894037634601511 2.46287446731171 >100 0.04413870505079618 3.069967461475597 >500 0.0033952850039073983 0.9668238741292674 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 4.244106254884248E-4 6.696499680445266 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 35518 6.657594433697723 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 831 0.15576499167753835 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 720 0.13495883755454585 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 702 0.1315848666156822 No Hit CCTGTCTCTTATACACATCTGACGCAGGTGATCTCGTATGCCGTCTTCTGC 628 0.1177140972003539 Illumina PCR Primer Index 5 (96% over 25bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA 619 0.11602711173092208 No Hit GCTGTCTCTTATACACATCTGACGCAGGTGATCTCGTATGCCGTCTTCTGC 571 0.10702985589395235 RNA PCR Primer, Index 33 (96% over 27bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 553 0.1036558849550887 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.623284898106077E-4 0.0 0.0 0.07029106122632597 0.0 2 5.623284898106077E-4 0.0 0.0 0.3606400047985365 0.0 3 5.623284898106077E-4 0.0 0.0 0.5201538530748122 0.0 4 5.623284898106077E-4 0.0 0.0 0.7087213399913026 0.0 5 5.623284898106077E-4 0.0 0.0 1.2926057552446504 0.0 6 5.623284898106077E-4 0.0 0.0 1.6376880051584266 0.0 7 5.623284898106077E-4 0.0 0.0 1.9790213984734657 0.0 8 5.623284898106077E-4 0.0 0.0 2.449877787274881 0.0 9 5.623284898106077E-4 0.0 0.0 2.633571760613013 0.0 10 5.623284898106077E-4 0.0 0.0 3.033387316868355 0.0 11 5.623284898106077E-4 0.0 0.0 3.6633826682861725 0.0 12 5.623284898106077E-4 0.0 0.0 4.169853194775594 0.0 13 5.623284898106077E-4 0.0 0.0 4.38916130580173 0.0 14 5.623284898106077E-4 0.0 0.0 4.482132949450418 0.0 15 5.623284898106077E-4 0.0 0.0 4.668076236747792 0.0 16 5.623284898106077E-4 0.0 0.0 5.0071603161035885 0.0 17 5.623284898106077E-4 0.0 0.0 5.395354416902845 0.0 18 5.623284898106077E-4 0.0 0.0 5.819162655390106 0.0 19 5.623284898106077E-4 0.0 0.0 6.092829187097935 0.0 20 5.623284898106077E-4 0.0 0.0 6.3646212905063955 0.0 21 5.623284898106077E-4 0.0 0.0 6.698082084964086 0.0 22 5.623284898106077E-4 0.0 0.0 7.068844002579214 1.8744282993686927E-4 23 5.623284898106077E-4 0.0 0.0 7.42704725058857 1.8744282993686927E-4 24 5.623284898106077E-4 0.0 0.0 7.704650081725074 1.8744282993686927E-4 25 5.623284898106077E-4 0.0 0.0 7.94795087498313 1.8744282993686927E-4 26 5.623284898106077E-4 0.0 0.0 8.183566512213774 1.8744282993686927E-4 27 7.497713197474771E-4 0.0 0.0 8.421056577743789 1.8744282993686927E-4 28 7.497713197474771E-4 0.0 0.0 8.668293670430518 1.8744282993686927E-4 29 7.497713197474771E-4 0.0 0.0 8.91609309160706 1.8744282993686927E-4 30 7.497713197474771E-4 0.0 0.0 9.186573095205961 1.8744282993686927E-4 31 7.497713197474771E-4 0.0 0.0 9.456865655974928 1.8744282993686927E-4 32 7.497713197474771E-4 0.0 0.0 9.706352062620901 1.8744282993686927E-4 33 7.497713197474771E-4 0.0 0.0 9.94759098474965 1.8744282993686927E-4 34 7.497713197474771E-4 0.0 0.0 10.182081965000675 1.8744282993686927E-4 35 7.497713197474771E-4 0.0 0.0 10.432130700136458 1.8744282993686927E-4 36 7.497713197474771E-4 0.0 0.0 10.684053863571611 1.8744282993686927E-4 37 7.497713197474771E-4 0.0 0.0 10.938413783795943 1.8744282993686927E-4 38 7.497713197474771E-4 0.0 0.0 11.193710918169959 1.8744282993686927E-4 39 7.497713197474771E-4 0.0 0.0 11.452382023482837 1.8744282993686927E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 25 3.8879847E-5 45.0 1 TTATCGG 20 7.0298836E-4 45.0 30 TAGCCGT 20 7.0298836E-4 45.0 44 GCGATAT 20 7.0298836E-4 45.0 9 AATTACG 25 3.8879847E-5 45.0 1 CGGTCTA 20 7.0298836E-4 45.0 31 ATTATCG 20 7.0298836E-4 45.0 30 GTAACGG 35 1.2102828E-7 45.0 2 TGCGTAG 20 7.0298836E-4 45.0 1 CGTTTTT 21995 0.0 44.49875 1 GGCGATA 70 0.0 41.785713 8 ACGGGAT 60 3.6379788E-12 41.249996 5 TACGGGA 110 0.0 40.909092 4 GTTTTTT 24425 0.0 40.172977 2 CTAGGGT 45 1.9250365E-8 40.0 4 GCTACGA 85 0.0 39.705883 10 CGGGTAT 40 3.4535697E-7 39.375 6 ATTACGG 40 3.4535697E-7 39.375 2 ACGGGTC 40 3.4535697E-7 39.375 5 GCAATAG 35 6.2419967E-6 38.571426 1 >>END_MODULE