##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935669.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 543149 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.44453731848903 34.0 31.0 34.0 31.0 34.0 2 32.64348456869109 34.0 31.0 34.0 31.0 34.0 3 32.505726789518164 34.0 31.0 34.0 31.0 34.0 4 36.0985917308142 37.0 35.0 37.0 35.0 37.0 5 36.13077626949511 37.0 35.0 37.0 35.0 37.0 6 36.14512039974298 37.0 37.0 37.0 35.0 37.0 7 36.288593001183834 37.0 37.0 37.0 35.0 37.0 8 36.05878497428883 37.0 37.0 37.0 35.0 37.0 9 37.89426290023548 39.0 38.0 39.0 35.0 39.0 10 37.71281913434435 39.0 38.0 39.0 35.0 39.0 11 37.68529814102576 39.0 38.0 39.0 35.0 39.0 12 37.63937519907061 39.0 37.0 39.0 35.0 39.0 13 37.637392317761794 39.0 38.0 39.0 35.0 39.0 14 39.03968892513841 41.0 39.0 41.0 35.0 41.0 15 39.15585778488039 41.0 39.0 41.0 35.0 41.0 16 39.20779196868631 41.0 39.0 41.0 35.0 41.0 17 39.18117312192419 41.0 39.0 41.0 35.0 41.0 18 38.51078249246523 39.0 39.0 41.0 35.0 41.0 19 37.833347755404134 37.0 37.0 41.0 35.0 41.0 20 37.01990982216666 37.0 35.0 41.0 34.0 41.0 21 36.97567886528374 36.0 35.0 40.0 34.0 41.0 22 36.96640700802174 36.0 35.0 40.0 34.0 41.0 23 36.96071059690803 36.0 35.0 40.0 34.0 41.0 24 36.81085300718588 36.0 35.0 40.0 34.0 41.0 25 36.72805620557158 36.0 35.0 40.0 34.0 41.0 26 36.57968623710989 36.0 35.0 40.0 33.0 41.0 27 36.51092978169894 35.0 35.0 40.0 33.0 41.0 28 36.371588643263635 36.0 35.0 40.0 33.0 41.0 29 36.10254460562387 35.0 35.0 40.0 33.0 41.0 30 35.59248014817297 35.0 35.0 40.0 31.0 41.0 31 34.9333332105923 35.0 35.0 40.0 25.0 41.0 32 33.869313945160535 35.0 34.0 40.0 18.0 41.0 33 32.71771834248061 35.0 33.0 40.0 12.0 41.0 34 31.74583217496488 35.0 30.0 40.0 8.0 41.0 35 31.166987327602556 35.0 25.0 40.0 7.0 41.0 36 30.821949409830452 35.0 23.0 40.0 7.0 41.0 37 30.654704326068906 35.0 23.0 40.0 7.0 41.0 38 30.503743908209348 35.0 23.0 40.0 7.0 41.0 39 30.344934815308505 35.0 22.0 40.0 7.0 41.0 40 30.177078481227067 35.0 21.0 40.0 7.0 41.0 41 30.014592680829754 35.0 21.0 40.0 7.0 41.0 42 29.90979639104555 35.0 20.0 40.0 7.0 41.0 43 29.79121382898615 35.0 20.0 40.0 7.0 41.0 44 29.681019388786503 35.0 18.0 40.0 7.0 41.0 45 29.618487744615198 35.0 20.0 40.0 7.0 41.0 46 29.58056260805046 35.0 20.0 40.0 7.0 41.0 47 29.596177107939074 35.0 20.0 40.0 7.0 41.0 48 29.599273864077812 35.0 20.0 40.0 7.0 41.0 49 29.615586146711124 35.0 20.0 40.0 7.0 41.0 50 29.527043223866748 35.0 20.0 40.0 7.0 41.0 51 28.94310216901808 35.0 20.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 9.0 9 13.0 10 8.0 11 12.0 12 11.0 13 13.0 14 16.0 15 30.0 16 54.0 17 114.0 18 277.0 19 476.0 20 792.0 21 1368.0 22 2277.0 23 3947.0 24 7780.0 25 16277.0 26 28355.0 27 35298.0 28 31245.0 29 23523.0 30 17561.0 31 14354.0 32 13235.0 33 15231.0 34 24460.0 35 35756.0 36 39412.0 37 37845.0 38 67246.0 39 126029.0 40 124.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.93183638375473 12.99551320171813 14.375245098490469 45.697405316036665 2 57.83900918532484 14.84436130785475 15.223815196198466 12.092814310621947 3 20.35574032171651 15.399457607396865 53.27304294033497 10.971759130551654 4 17.976650974226224 16.016599496639046 52.80190150400719 13.204848025127545 5 16.136456110570027 19.18552735989572 51.65009969640006 13.027916833134187 6 16.507440867975454 22.111796210616237 51.59099989137419 9.789763030034116 7 50.81552207589446 3.6431991958007837 41.7496856295418 3.791593098762955 8 50.83025099926539 3.622394591539338 42.117908713815176 3.4294456953800894 9 47.347597068207804 4.517913132492189 43.421050209058656 4.713439590241352 10 26.446334247140285 15.833040289128766 47.91005782943539 9.81056763429556 11 18.61846381011472 16.17916998834574 51.990706049352944 13.2116601521866 12 16.502838079422038 14.182112090789085 55.18099085149747 14.134058978291408 13 16.027093854540837 14.84822765023962 55.70626108121344 13.4184174140061 14 13.11665859644407 17.26045707531451 55.173626389812 14.449257938429419 15 12.797225070836916 15.848873881752521 57.59045860344031 13.763442443970256 16 14.560645421422114 16.17751298446651 55.45678994161823 13.805051652493146 17 14.804040880126815 15.573443014716034 54.320453503550596 15.302062601606558 18 15.022581280643067 15.85568600881158 55.25831769919488 13.863415011350478 19 14.901251774374987 16.68492439459522 54.14665220777356 14.267171623256234 20 16.377274007684818 16.480008248197088 54.10633178004562 13.036385964072474 21 15.768417137838789 16.93200208414266 54.4544867062261 12.845094071792454 22 15.766576022417421 14.71990190537035 54.01501245514583 15.498509617066404 23 14.695599181808305 16.402865512041814 54.545621919583766 14.355913386566115 24 14.506700739576065 16.09521512513141 54.4614829448273 14.936601190465232 25 14.057100353678273 17.521159018980057 53.38222108482202 15.039519542519638 26 14.172722402140112 17.342386711565336 53.584743781172385 14.900147105122166 27 14.052497565124856 16.97526829654478 54.37053184301177 14.601702295318598 28 12.627658340529027 17.119979968664214 54.98270272061626 15.2696589701905 29 13.760864882380341 17.04302134405108 53.93676504973774 15.259348723830845 30 14.773110141047852 16.869772382900454 53.67109209443449 14.686025381617199 31 15.340357802370988 17.558165438949533 51.245054303699355 15.856422454980127 32 15.299300928474507 19.366509005816084 48.8440556826948 16.490134383014606 33 16.37248710758926 19.446965749729817 46.4307215883671 17.749825554313826 34 15.365581083643715 21.86655963649017 45.326604670173374 17.441254609692734 35 16.630979712749173 22.87843667207341 41.94097752182182 18.549606093355596 36 17.897114788023178 23.89068193074092 40.63949303045757 17.572710250778332 37 16.866642486684132 24.764475309721643 40.72731423605677 17.64156796753745 38 17.79953567069073 24.752139836398484 38.445619894356795 19.002704598553986 39 18.107370169143273 23.950886405019617 38.550195250290436 19.391548175546674 40 18.522725808203642 23.581742763035557 39.82590412575554 18.069627303005255 41 16.72156259148042 24.982831598695753 38.14791153072177 20.14769427910205 42 17.530180484544758 24.54280501298907 38.27255504474831 19.654459457717863 43 17.947193127484354 24.35004022837196 38.15951055787639 19.543256086267306 44 17.411428539866595 24.306221681343427 38.74995627350874 19.532393505281238 45 17.55945421974449 23.302261442072066 39.03753850232625 20.100745835857197 46 18.094114138109433 23.163993673927415 39.782637913353426 18.95925427460973 47 16.197765254101544 23.378483620516654 41.86917402038851 18.55457710499329 48 16.606492877644992 22.142174615068793 41.23012285763207 20.021209649654146 49 17.09033801038021 21.443839535744335 42.25875404354974 19.20706841032571 50 16.14860747235105 21.243526177899618 42.65974898232345 19.94811736742588 51 16.336033022246195 21.353993103181633 40.89853797024389 21.411435904328275 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 130.0 1 310.5 2 491.0 3 31963.0 4 63435.0 5 41851.5 6 20268.0 7 19705.5 8 19143.0 9 18813.5 10 18484.0 11 17705.5 12 16927.0 13 15796.0 14 14665.0 15 13409.0 16 12153.0 17 10976.0 18 9799.0 19 8795.0 20 7791.0 21 7104.5 22 6418.0 23 5873.0 24 5328.0 25 5082.0 26 4800.5 27 4765.0 28 4953.0 29 5141.0 30 6016.0 31 6891.0 32 7056.0 33 7221.0 34 7701.5 35 8182.0 36 8911.0 37 9640.0 38 11490.5 39 13341.0 40 14339.0 41 15337.0 42 17024.0 43 18711.0 44 20925.5 45 23140.0 46 26921.5 47 30703.0 48 32476.0 49 34249.0 50 33929.0 51 33609.0 52 29912.5 53 26216.0 54 23068.0 55 19920.0 56 18599.0 57 17278.0 58 16219.5 59 15161.0 60 14417.5 61 13674.0 62 12829.0 63 11984.0 64 10494.5 65 9005.0 66 8086.0 67 7167.0 68 5932.5 69 4698.0 70 3918.5 71 3139.0 72 2451.0 73 1763.0 74 1358.5 75 867.0 76 780.0 77 548.5 78 317.0 79 258.0 80 199.0 81 137.5 82 76.0 83 45.0 84 14.0 85 8.5 86 3.0 87 2.0 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 543149.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.97998511199395 #Duplication Level Percentage of deduplicated Percentage of total 1 80.80635955787145 34.73056130751744 2 7.645251336576808 6.571855772470461 3 2.637317609912319 3.4005561482889273 4 1.3234568761490741 2.2752862733301287 5 0.9220837490719583 1.9815572903562169 6 0.6808343418336812 1.755734992544749 7 0.5781684464685257 1.7394769855009335 8 0.5319055187276164 1.8289033020720296 9 0.4783472559812872 1.8503422146394992 >10 4.271715434380638 30.85800465732453 >50 0.0926656494841011 2.781639433474168 >100 0.02758419333411158 2.26517627809534 >500 0.0038790271876094403 1.188346894339353 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 4.310030208454934E-4 6.772558450046258 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36560 6.7311179805173165 No Hit GCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTCTGC 997 0.18355920751027804 TruSeq Adapter, Index 22 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTCTGC 776 0.14287055669806994 TruSeq Adapter, Index 22 (95% over 23bp) GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 754 0.13882010277106283 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 732 0.13476964884405568 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGC 687 0.12648462944790473 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 661 0.12169772935235082 No Hit GAATCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTC 639 0.11764727542534369 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCG 591 0.10880992140278266 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 578 0.10641647135500572 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.841115421366881E-4 0.0 0.0 0.09316044032116418 0.0 2 1.841115421366881E-4 0.0 0.0 0.5392627069183594 0.0 3 1.841115421366881E-4 0.0 0.0 0.779160046322464 0.0 4 1.841115421366881E-4 0.0 0.0 1.0779730792103088 0.0 5 1.841115421366881E-4 0.0 0.0 1.9747804009581165 0.0 6 1.841115421366881E-4 0.0 0.0 2.383508024501564 0.0 7 1.841115421366881E-4 0.0 0.0 2.8343971911943133 0.0 8 1.841115421366881E-4 0.0 0.0 3.5677134635247416 0.0 9 1.841115421366881E-4 0.0 0.0 3.8098201414344866 0.0 10 3.682230842733762E-4 0.0 0.0 4.507602886132535 0.0 11 3.682230842733762E-4 0.0 0.0 5.342548729722415 0.0 12 3.682230842733762E-4 0.0 0.0 6.172339450132468 0.0 13 5.523346264100643E-4 0.0 0.0 6.522519603276449 0.0 14 5.523346264100643E-4 0.0 0.0 6.639246320991109 0.0 15 5.523346264100643E-4 0.0 0.0 6.920752868918106 0.0 16 5.523346264100643E-4 0.0 0.0 7.367775693225984 0.0 17 5.523346264100643E-4 0.0 0.0 7.900226273085286 0.0 18 5.523346264100643E-4 0.0 0.0 8.476679511515256 0.0 19 5.523346264100643E-4 0.0 0.0 8.845086707330768 0.0 20 7.364461685467524E-4 0.0 0.0 9.207786445340044 0.0 21 7.364461685467524E-4 0.0 0.0 9.629033653748786 0.0 22 7.364461685467524E-4 0.0 0.0 10.08139571277863 0.0 23 7.364461685467524E-4 0.0 0.0 10.520869963858905 0.0 24 7.364461685467524E-4 0.0 0.0 10.89075005201151 0.0 25 7.364461685467524E-4 0.0 0.0 11.255659128526426 0.0 26 7.364461685467524E-4 0.0 0.0 11.549132926692307 0.0 27 7.364461685467524E-4 0.0 0.0 11.860097321361174 0.0 28 7.364461685467524E-4 0.0 0.0 12.15485990032201 0.0 29 7.364461685467524E-4 0.0 0.0 12.465824294990878 0.0 30 7.364461685467524E-4 0.0 0.0 12.804589532522384 0.0 31 7.364461685467524E-4 0.0 0.0 13.120340827286803 0.0 32 7.364461685467524E-4 0.0 0.0 13.457080837854805 0.0 33 7.364461685467524E-4 0.0 0.0 13.750738747562824 0.0 34 7.364461685467524E-4 0.0 0.0 14.09668433523766 0.0 35 7.364461685467524E-4 0.0 0.0 14.436554242021987 0.0 36 7.364461685467524E-4 0.0 0.0 14.734078494114874 0.0 37 7.364461685467524E-4 0.0 0.0 15.040992434856733 0.0 38 7.364461685467524E-4 0.0 0.0 15.34422414475586 0.0 39 7.364461685467524E-4 0.0 0.0 15.6721268013013 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGCGAC 20 7.0299953E-4 45.000004 26 ACCGAAC 20 7.0299953E-4 45.000004 11 GCGTTAT 20 7.0299953E-4 45.000004 11 GTTCCGA 50 2.1827873E-11 45.000004 15 GCGATTA 25 3.8880782E-5 45.000004 9 AACTCGT 20 7.0299953E-4 45.000004 44 CAACTCG 25 3.8880782E-5 45.000004 39 AGTACGG 30 2.1633787E-6 45.000004 2 CCCGCAT 50 2.1827873E-11 45.000004 23 CGTTTTT 20790 0.0 44.686146 1 TGCATTA 275 0.0 43.363636 15 CTCAACT 380 0.0 42.039474 2 CGGGTAT 55 6.002665E-11 40.909092 6 TCCGAAC 55 6.002665E-11 40.909092 17 TTCCGAA 55 6.002665E-11 40.909092 16 CCATACG 55 6.002665E-11 40.909092 2 GGCGATA 55 6.002665E-11 40.909092 8 ACTTGAC 375 0.0 40.8 6 CAACTTG 375 0.0 40.8 4 GTTTTTT 22995 0.0 40.567513 2 >>END_MODULE