SRR2935666.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935666.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	245306
Sequences flagged as poor quality	0
Sequence length	51
%GC	34

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17502	7.134762296886338	No Hit
GCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGC	705	0.2873961501145508	No Hit
CCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGC	678	0.276389489046334	No Hit
CTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGCT	481	0.19608162865971482	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	412	0.16795349481871621	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	353	0.14390190211409423	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	345	0.14064066920499296	No Hit
TCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGC	292	0.11903500118219694	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA	283	0.11536611415945798	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTTGCG	20	7.022429E-4	45.0	1
CAACGGG	50	2.1827873E-11	45.0	3
CGATTGT	20	7.022429E-4	45.0	10
GCGTTCA	25	3.881807E-5	45.0	37
ACGGGCG	20	7.022429E-4	45.0	5
TAGTTGG	40	6.7775545E-9	45.0	2
AACGGGC	35	1.2067176E-7	45.0	4
CAGGCTT	25	3.881807E-5	45.0	36
TATTAGG	25	3.881807E-5	45.0	2
GCGATTA	20	7.022429E-4	45.0	9
GACGGGC	20	7.022429E-4	45.0	4
GCGATAG	20	7.022429E-4	45.0	9
AGTTATG	20	7.022429E-4	45.0	1
TAGGACG	20	7.022429E-4	45.0	1
TTATTAG	20	7.022429E-4	45.0	1
TCGGTAC	20	7.022429E-4	45.0	18
ACCTTAC	20	7.022429E-4	45.0	21
TCTGCGG	30	2.1585001E-6	44.999996	2
TATATGG	30	2.1585001E-6	44.999996	2
TACGGGC	30	2.1585001E-6	44.999996	4