##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935666.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 245306 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33893585970176 33.0 31.0 34.0 30.0 34.0 2 32.55105867773312 34.0 31.0 34.0 31.0 34.0 3 32.38381857761327 34.0 31.0 34.0 30.0 34.0 4 36.01282479841504 37.0 35.0 37.0 35.0 37.0 5 36.06339836775293 37.0 35.0 37.0 35.0 37.0 6 36.075305944412285 37.0 36.0 37.0 35.0 37.0 7 36.23780502719053 37.0 37.0 37.0 35.0 37.0 8 36.01225408265595 37.0 37.0 37.0 35.0 37.0 9 37.84653045583883 39.0 38.0 39.0 35.0 39.0 10 37.67794102060284 39.0 38.0 39.0 35.0 39.0 11 37.62208833049334 39.0 37.0 39.0 35.0 39.0 12 37.54447098725673 39.0 37.0 39.0 35.0 39.0 13 37.50802263295639 39.0 37.0 39.0 35.0 39.0 14 38.89115635165874 41.0 38.0 41.0 35.0 41.0 15 39.024989197165986 41.0 38.0 41.0 35.0 41.0 16 39.07293339747091 41.0 39.0 41.0 35.0 41.0 17 39.04272622765036 41.0 38.0 41.0 35.0 41.0 18 38.352914319258396 39.0 38.0 40.0 35.0 41.0 19 37.65447644982186 37.0 37.0 40.0 35.0 41.0 20 36.81405672914645 35.0 35.0 40.0 34.0 41.0 21 36.78118757796385 35.0 35.0 40.0 34.0 41.0 22 36.76745778741653 35.0 35.0 40.0 34.0 41.0 23 36.79716761921845 35.0 35.0 40.0 34.0 41.0 24 36.61813000904992 35.0 35.0 40.0 34.0 41.0 25 36.540206925228084 35.0 35.0 40.0 33.0 41.0 26 36.394609182001254 35.0 35.0 40.0 33.0 41.0 27 36.29841096426504 35.0 35.0 40.0 33.0 41.0 28 36.1663717968578 35.0 35.0 40.0 33.0 41.0 29 35.90366317986515 35.0 35.0 40.0 33.0 41.0 30 35.34391739297041 35.0 35.0 40.0 31.0 41.0 31 34.63194948350224 35.0 35.0 40.0 23.0 41.0 32 33.548947029424475 35.0 34.0 40.0 17.0 41.0 33 32.38509861153009 35.0 33.0 40.0 10.0 41.0 34 31.434066023660243 35.0 29.0 40.0 8.0 41.0 35 30.851935949385666 35.0 24.0 40.0 7.0 41.0 36 30.538877972817623 35.0 23.0 40.0 7.0 41.0 37 30.40069138137673 35.0 23.0 40.0 7.0 41.0 38 30.251277995646255 35.0 22.0 40.0 7.0 41.0 39 30.118284917613103 35.0 21.0 40.0 7.0 41.0 40 29.977424115186746 35.0 21.0 40.0 7.0 41.0 41 29.79943417609027 35.0 20.0 40.0 7.0 41.0 42 29.696766487570628 35.0 20.0 40.0 7.0 41.0 43 29.56870602431249 35.0 18.0 40.0 7.0 41.0 44 29.440559953690492 35.0 18.0 40.0 7.0 41.0 45 29.346803584094967 35.0 20.0 40.0 7.0 41.0 46 29.27243524414405 35.0 20.0 40.0 7.0 41.0 47 29.25100079084898 35.0 20.0 40.0 7.0 41.0 48 29.1765916854867 35.0 20.0 40.0 7.0 41.0 49 29.153261640563215 35.0 18.0 40.0 7.0 41.0 50 29.030113409374415 35.0 18.0 40.0 7.0 41.0 51 28.417258444554964 35.0 18.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 7.0 10 5.0 11 7.0 12 4.0 13 2.0 14 6.0 15 13.0 16 26.0 17 68.0 18 118.0 19 253.0 20 430.0 21 704.0 22 1137.0 23 1908.0 24 3882.0 25 8223.0 26 13318.0 27 15753.0 28 13867.0 29 10783.0 30 8303.0 31 6917.0 32 6488.0 33 7263.0 34 11568.0 35 18540.0 36 17786.0 37 15802.0 38 29311.0 39 52769.0 40 39.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.952508295761213 13.175380952769194 14.804366790865286 47.06774396060431 2 58.97409765761946 13.793792243157526 15.362445272435243 11.869664826787767 3 19.445101220516417 15.47658842425379 53.95669082696713 11.12161952826266 4 18.000375041784547 16.194874972483348 54.183346514149676 11.621403471582433 5 15.67878486461807 18.016681206330055 53.691715653102655 12.612818275949223 6 16.070948121937498 20.361915322087516 53.654619128761624 9.912517427213357 7 48.68613079174582 3.6807089920344387 43.84319992173041 3.7899602944893314 8 48.63884291456385 3.491965137420202 43.66464741995711 4.2045445280588325 9 45.21658663057569 4.733271913446878 45.147693085370925 4.902448370606508 10 25.972866542196275 15.481887927731078 49.37751216847529 9.167733361597353 11 18.611040904013763 15.42930054707182 53.50419476082933 12.455463788085087 12 17.854434869102263 14.070589386317497 55.944819939178004 12.130155805402232 13 15.561380479890422 15.28132210382135 56.82168393761261 12.335613478675613 14 11.990330444424515 18.401914343717642 56.260751877247195 13.34700333461065 15 11.250438228172161 16.247462353142605 59.748640473531026 12.753458945154216 16 13.106895061678067 15.52509926377667 58.00836506241185 13.359640612133417 17 12.96177019722306 15.512054332140265 55.759744971586514 15.766430499050166 18 13.914457860794274 16.046488875119238 57.0487472789088 12.990305985177697 19 15.539774811867627 15.925415603368853 54.816433352628955 13.718376232134558 20 15.338801333844259 17.11250438228172 55.01129201894776 12.537402264926257 21 14.836163811729024 15.847146013550423 56.53714136629353 12.779548808427027 22 13.424049962088166 15.777029506004745 54.84130025356085 15.95762027834623 23 12.640131101562947 16.46107310868874 56.41973698156588 14.479058808182433 24 14.215714250772503 15.182262154207399 56.13315613967861 14.468867455341492 25 13.150921705950935 16.24134754143804 55.340268888653355 15.267461863957669 26 12.241853032538952 17.840166975124948 54.72715710174232 15.190822890593788 27 13.309906810269624 16.763144806894246 55.19922056533473 14.727727817501407 28 12.018050924151876 16.277221103438155 56.17229093458782 15.53243703782215 29 13.051046448109707 15.814533684459409 55.32314741588057 15.811272451550309 30 14.0457224853856 16.686098179416728 53.81971904478489 15.448460290412791 31 15.306596658866884 18.303669702330964 51.506281949891154 14.883451688910993 32 16.35141415212021 19.77733932313111 48.01717039126642 15.85407613348226 33 15.463135838503748 21.993347084865434 45.534964493326704 17.00855258330412 34 15.475773116026515 22.18372155593422 45.093475088257115 17.24703023978215 35 14.919325250911106 24.005527789780924 42.0332156571792 19.04193130212877 36 16.85608994480363 25.20076965096655 41.10131835340351 16.841822050826316 37 17.031381213667824 25.20606915444384 41.39442166110898 16.36812797077935 38 17.44392717666914 26.65242594963026 39.05367174060154 16.84997513309907 39 17.498145173782948 26.158349163901413 39.67126772276259 16.672237939553046 40 17.367288203305257 24.882391788215536 40.57789047149275 17.17242953698646 41 15.391388714503517 26.00017936781 38.797257303123445 19.811174614563036 42 17.110058457599894 25.947184333037104 38.17028527634873 18.772471933014277 43 18.22988430776255 24.763356787033338 38.60810579439557 18.398653110808542 44 17.44759606369188 24.87790759296552 38.1560173823714 19.518478960971194 45 17.535241698123976 23.859179962985007 38.0801937172348 20.52538462165622 46 17.819376615329425 24.294146902236392 39.76258224421743 18.12389423821676 47 16.44028274889322 24.028764074258273 41.202416573585644 18.32853660326286 48 16.088477248823917 23.36510317725616 41.191817566631066 19.354602007288857 49 16.695066569916758 22.23590128247984 42.472666791680595 18.596365355922806 50 16.3946254881658 21.958288831092595 41.59498748501871 20.05209819572289 51 15.201421897548368 22.69818104734495 40.209778806877935 21.890618248228744 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 81.0 1 141.5 2 202.0 3 15431.0 4 30660.0 5 20038.5 6 9417.0 7 9100.0 8 8783.0 9 8538.0 10 8293.0 11 8003.5 12 7714.0 13 7282.0 14 6850.0 15 6280.0 16 5710.0 17 5236.0 18 4762.0 19 4234.5 20 3707.0 21 3432.0 22 3157.0 23 2913.0 24 2669.0 25 2576.5 26 2450.5 27 2417.0 28 2210.0 29 2003.0 30 2326.5 31 2650.0 32 2888.0 33 3126.0 34 3224.0 35 3322.0 36 3746.5 37 4171.0 38 4782.5 39 5394.0 40 6003.0 41 6612.0 42 7895.5 43 9179.0 44 10269.5 45 11360.0 46 12762.5 47 14165.0 48 15767.0 49 17369.0 50 17065.0 51 16761.0 52 14295.5 53 11830.0 54 10639.0 55 9448.0 56 8295.5 57 7143.0 58 6835.5 59 6528.0 60 5907.0 61 5286.0 62 4579.0 63 3872.0 64 3434.0 65 2996.0 66 2421.0 67 1846.0 68 1492.5 69 1139.0 70 1051.0 71 963.0 72 705.0 73 447.0 74 400.0 75 274.0 76 195.0 77 162.5 78 130.0 79 96.0 80 62.0 81 42.5 82 23.0 83 23.5 84 24.0 85 12.5 86 1.0 87 1.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 245306.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.64701481781397 #Duplication Level Percentage of deduplicated Percentage of total 1 78.98613660610845 34.475090748486934 2 9.053069976026302 7.902789587806534 3 2.945912077005168 3.8574080423106514 4 1.5082789900949218 2.633275017202821 5 1.008618913192476 2.2011602324819712 6 0.7351987559937614 1.9253538598138857 7 0.5576258290502114 1.7037091976345267 8 0.5546319338767174 1.9366422589079921 9 0.47383106450349066 1.8613180344171982 >10 4.096892733090535 29.500256067700086 >50 0.05286956770088466 1.6018218873679726 >100 0.023940936317381728 2.1787215885809554 >500 0.0019950780264484775 0.6021526692660795 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 9.975390132242387E-4 7.6203008080223595 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17502 7.134762296886338 No Hit GCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGC 705 0.2873961501145508 No Hit CCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGC 678 0.276389489046334 No Hit CTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGCT 481 0.19608162865971482 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 412 0.16795349481871621 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 353 0.14390190211409423 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 345 0.14064066920499296 No Hit TCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGC 292 0.11903500118219694 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA 283 0.11536611415945798 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.076541136376607E-4 0.0 0.0 0.20301174859155505 0.0 2 4.076541136376607E-4 0.0 0.0 0.9885612255713272 0.0 3 4.076541136376607E-4 0.0 0.0 1.3998842262317268 0.0 4 4.076541136376607E-4 0.0 0.0 1.821398579733068 0.0 5 4.076541136376607E-4 0.0 0.0 2.951008128623026 0.0 6 4.076541136376607E-4 0.0 0.0 3.490742175079289 0.0 7 4.076541136376607E-4 0.0 0.0 4.074502865808419 0.0 8 4.076541136376607E-4 0.0 0.0 4.998654741424995 0.0 9 4.076541136376607E-4 0.0 0.0 5.310510138357806 0.0 10 4.076541136376607E-4 0.0 0.0 6.004745093882742 0.0 11 4.076541136376607E-4 0.0 0.0 7.155960310795496 0.0 12 4.076541136376607E-4 0.0 0.0 8.043830970298322 0.0 13 4.076541136376607E-4 0.0 0.0 8.404604860867652 0.0 14 4.076541136376607E-4 0.0 0.0 8.532200598436239 0.0 15 4.076541136376607E-4 0.0 0.0 8.80573650868711 0.0 16 4.076541136376607E-4 0.0 0.0 9.402134476939008 0.0 17 4.076541136376607E-4 0.0 0.0 10.110229672327623 0.0 18 4.076541136376607E-4 0.0 0.0 10.905970502148337 0.0 19 4.076541136376607E-4 0.0 0.0 11.318108811036012 0.0 20 4.076541136376607E-4 0.0 0.0 11.791395236969336 0.0 21 4.076541136376607E-4 0.0 0.0 12.369448770107539 0.0 22 4.076541136376607E-4 0.0 0.0 12.936495642177524 0.0 23 4.076541136376607E-4 0.0 0.0 13.492943507292932 0.0 24 4.076541136376607E-4 0.0 0.0 13.908750703203346 0.0 25 4.076541136376607E-4 0.0 0.0 14.288276683000008 0.0 26 4.076541136376607E-4 0.0 0.0 14.655165385273904 0.0 27 4.076541136376607E-4 0.0 0.0 15.008193847684117 0.0 28 4.076541136376607E-4 0.0 0.0 15.39628056386717 0.0 29 4.076541136376607E-4 0.0 0.0 15.749716680391021 0.0 30 4.076541136376607E-4 0.0 0.0 16.174492266801465 0.0 31 4.076541136376607E-4 0.0 0.0 16.578477493416386 0.0 32 4.076541136376607E-4 0.0 0.0 16.89848597262195 0.0 33 4.076541136376607E-4 0.0 0.0 17.2800502229868 0.0 34 4.076541136376607E-4 0.0 0.0 17.630632760715187 0.0 35 4.076541136376607E-4 0.0 0.0 18.01871947689824 0.0 36 4.076541136376607E-4 0.0 0.0 18.387238795626686 0.0 37 4.076541136376607E-4 0.0 0.0 18.732929483991423 0.0 38 4.076541136376607E-4 0.0 0.0 19.061906353697015 0.0 39 4.076541136376607E-4 0.0 0.0 19.418603703129968 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTTGCG 20 7.022429E-4 45.0 1 CAACGGG 50 2.1827873E-11 45.0 3 CGATTGT 20 7.022429E-4 45.0 10 GCGTTCA 25 3.881807E-5 45.0 37 ACGGGCG 20 7.022429E-4 45.0 5 TAGTTGG 40 6.7775545E-9 45.0 2 AACGGGC 35 1.2067176E-7 45.0 4 CAGGCTT 25 3.881807E-5 45.0 36 TATTAGG 25 3.881807E-5 45.0 2 GCGATTA 20 7.022429E-4 45.0 9 GACGGGC 20 7.022429E-4 45.0 4 GCGATAG 20 7.022429E-4 45.0 9 AGTTATG 20 7.022429E-4 45.0 1 TAGGACG 20 7.022429E-4 45.0 1 TTATTAG 20 7.022429E-4 45.0 1 TCGGTAC 20 7.022429E-4 45.0 18 ACCTTAC 20 7.022429E-4 45.0 21 TCTGCGG 30 2.1585001E-6 44.999996 2 TATATGG 30 2.1585001E-6 44.999996 2 TACGGGC 30 2.1585001E-6 44.999996 4 >>END_MODULE