##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935665.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 812159 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.37495244157856 33.0 31.0 34.0 30.0 34.0 2 32.57429887497399 34.0 31.0 34.0 31.0 34.0 3 32.42632292445199 34.0 31.0 34.0 30.0 34.0 4 36.06653992629522 37.0 35.0 37.0 35.0 37.0 5 36.06691546852279 37.0 35.0 37.0 35.0 37.0 6 36.06498481208729 37.0 35.0 37.0 35.0 37.0 7 36.19172846696275 37.0 37.0 37.0 35.0 37.0 8 35.7850938055233 37.0 36.0 37.0 35.0 37.0 9 37.66914237236797 39.0 38.0 39.0 35.0 39.0 10 37.61561960158048 39.0 37.0 39.0 35.0 39.0 11 37.588190243536054 39.0 37.0 39.0 35.0 39.0 12 37.521740201118256 39.0 37.0 39.0 35.0 39.0 13 37.48661407433766 39.0 37.0 39.0 35.0 39.0 14 38.92244622050608 41.0 38.0 41.0 35.0 41.0 15 38.95150210734597 41.0 39.0 41.0 35.0 41.0 16 39.0626810759962 41.0 39.0 41.0 35.0 41.0 17 38.915272748316525 41.0 38.0 41.0 35.0 41.0 18 38.28582334247358 39.0 38.0 40.0 35.0 41.0 19 37.595034962365744 37.0 37.0 40.0 35.0 41.0 20 36.59999581362763 35.0 35.0 40.0 34.0 41.0 21 36.68298695206234 35.0 35.0 40.0 33.0 41.0 22 36.63337228301355 35.0 35.0 40.0 33.0 41.0 23 36.52804684796943 35.0 35.0 40.0 33.0 41.0 24 36.43842154060966 35.0 35.0 40.0 33.0 41.0 25 36.46661675854112 35.0 35.0 40.0 33.0 41.0 26 36.24784309476346 35.0 35.0 40.0 33.0 41.0 27 36.08372498488596 35.0 35.0 40.0 33.0 41.0 28 35.936944613062224 35.0 35.0 40.0 33.0 41.0 29 35.71656288977897 35.0 35.0 40.0 31.0 41.0 30 35.19495197368988 35.0 35.0 40.0 30.0 41.0 31 34.544640889284 35.0 35.0 40.0 23.0 41.0 32 33.351578939591874 35.0 33.0 40.0 16.0 41.0 33 32.13323130076746 35.0 31.0 40.0 10.0 41.0 34 31.044451886884218 35.0 24.0 40.0 7.0 41.0 35 30.47159238523491 35.0 22.0 40.0 7.0 41.0 36 30.091784982989783 35.0 21.0 40.0 7.0 41.0 37 29.78992414047003 35.0 19.0 40.0 7.0 41.0 38 29.67019881574913 35.0 18.0 40.0 7.0 41.0 39 29.454832120311416 35.0 18.0 40.0 7.0 41.0 40 29.414578918660016 35.0 18.0 40.0 7.0 41.0 41 29.22172259372857 35.0 18.0 40.0 7.0 41.0 42 29.061310654687073 35.0 18.0 40.0 7.0 41.0 43 28.952170695639648 35.0 18.0 40.0 7.0 41.0 44 28.930175002678048 35.0 18.0 40.0 7.0 41.0 45 28.892625705065143 35.0 18.0 40.0 7.0 41.0 46 28.855205692481398 35.0 18.0 40.0 7.0 41.0 47 28.77369948495307 35.0 18.0 40.0 7.0 41.0 48 28.764467302584837 35.0 18.0 40.0 7.0 41.0 49 28.759487982033075 35.0 18.0 40.0 7.0 41.0 50 28.62449963615499 35.0 18.0 39.0 7.0 41.0 51 28.006296796563234 34.0 18.0 38.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 11.0 10 14.0 11 12.0 12 9.0 13 22.0 14 33.0 15 39.0 16 98.0 17 227.0 18 463.0 19 984.0 20 1855.0 21 3383.0 22 5866.0 23 9134.0 24 14822.0 25 26681.0 26 43960.0 27 54177.0 28 49764.0 29 38530.0 30 29377.0 31 25035.0 32 23065.0 33 24113.0 34 36655.0 35 50027.0 36 54072.0 37 51716.0 38 91869.0 39 175952.0 40 190.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.420397976258347 10.70122968532024 12.783703683638304 46.09466865478311 2 56.816953330567046 20.327177313801855 13.284098310798747 9.571771044832355 3 18.15408066647048 20.75110908085732 51.48917884305906 9.605631409613142 4 16.223547359568755 14.0856654916094 58.6757026641335 11.015084484688344 5 20.14100687180712 16.3759805653819 51.26003651994252 12.222976042868453 6 14.803997739358918 24.715480589391976 51.76855763465036 8.711964036598745 7 44.86830780672258 3.5522600870026686 48.47326693418407 3.106165172090687 8 44.251802910513824 8.90687660913688 43.36133688107871 3.4799835992705863 9 41.27467651038774 4.5809995333426095 43.63135789913059 10.512966057139057 10 27.610480213849755 14.410724993504967 48.26271702954717 9.716077763098113 11 21.618550062241507 14.841675090714995 51.568843046743304 11.970931800300187 12 17.437472219109804 12.773484009904465 53.787866661577354 16.001177109408378 13 17.59224486830781 13.022326908893456 56.62770467359224 12.757723549206498 14 12.51971596694736 19.427107253628908 53.83071541409995 14.222461365323785 15 11.545522490054287 14.926756952764176 58.29055640582694 15.237164151354598 16 13.247036602438685 15.472339775832072 54.32544612569706 16.95517749603218 17 12.961255123688833 17.88886166378751 55.09204478433411 14.057838428189553 18 13.39208209229966 15.895409642693117 54.12043700802429 16.592071256982933 19 14.012650232282104 16.72689707311007 52.771316946558485 16.489135748049335 20 17.737906001164795 15.829043327722772 54.89540841140712 11.537642259705304 21 14.906071348098093 19.318015314735167 53.815570596398 11.960342740768741 22 13.816875759549546 14.246225184969937 56.309294116053636 15.627604939426886 23 15.980245247543893 16.75447787933151 54.50102750816035 12.76424936496425 24 15.185942654086206 16.477192273926658 53.07901531596646 15.257849756020681 25 13.491323743257169 20.05333930917468 52.461402262364885 13.993934685203266 26 13.246667216641075 15.661219047009267 55.840297281689914 15.251816454659739 27 16.851503215503367 16.385953981917332 52.71012203275467 14.052420769824629 28 12.082609439777187 18.490098613695103 55.25999219364681 14.167299752880902 29 14.464162805559011 14.93512969750997 56.448552561752074 14.152154935178949 30 14.931435839533885 18.231651683968288 53.26309257177474 13.57381990472309 31 15.467660889062362 15.995882579642656 51.410130282370815 17.126326248924165 32 18.32584506235848 18.641916176512236 49.7206827727083 13.311555988420986 33 17.813014446678544 19.117561955232905 45.16049197263097 17.908931625457576 34 17.710448323542558 20.94023460923292 44.568735924862004 16.780581142362518 35 20.35364996263047 21.891279909475852 40.67097698849609 17.08409313939758 36 17.032748513529985 26.853731843148942 40.31291902201416 15.800600621306913 37 19.098600150955665 24.0417208945539 41.31358514773585 15.546093806754588 38 17.280360126526947 24.654162546988953 38.39716114701678 19.668316179467322 39 19.329343145861834 24.429083467646116 39.31594675426856 16.92562663222349 40 18.622954372234993 22.997959759111207 39.142951072388534 19.236134796265265 41 17.80722740251601 26.11163577575327 37.25883724738629 18.822299574344434 42 18.92868268405571 24.589027518010635 39.231603663814596 17.250686134119057 43 18.19692941899308 25.960187598733746 37.62846930219329 18.214413680079886 44 18.334587192901882 23.589962064078584 39.41962103479737 18.655829708222157 45 17.70109055000314 21.98978278883815 39.72337928903084 20.585747372127873 46 19.550851495827786 24.2137315476403 39.25130423968706 16.984112716844855 47 16.242386035246792 23.483332697168905 43.300511353072494 16.973769914511813 48 17.393761566392786 22.753672618292722 41.008349350311946 18.844216465002543 49 17.15747778452249 21.06262443684057 43.850649934310894 17.92924784432605 50 16.902232198374946 21.51684583929994 42.13485290441896 19.446069057906147 51 16.30074899126895 20.94491349600263 41.436713746938715 21.317623765789705 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 200.0 1 462.0 2 724.0 3 51470.5 4 102217.0 5 68147.5 6 34078.0 7 32221.0 8 30364.0 9 29078.0 10 27792.0 11 26159.5 12 24527.0 13 22707.5 14 20888.0 15 19329.5 16 17771.0 17 16114.5 18 14458.0 19 13064.0 20 11670.0 21 10544.0 22 9418.0 23 8560.5 24 7703.0 25 7440.0 26 6918.5 27 6660.0 28 7129.0 29 7598.0 30 8110.0 31 8622.0 32 9671.0 33 10720.0 34 11770.5 35 12821.0 36 13056.0 37 13291.0 38 14171.5 39 15052.0 40 16941.0 41 18830.0 42 21001.5 43 23173.0 44 26169.0 45 29165.0 46 48146.0 47 67127.0 48 56376.0 49 45625.0 50 44642.5 51 43660.0 52 39012.0 53 34364.0 54 33149.0 55 31934.0 56 29418.5 57 26903.0 58 25550.5 59 24198.0 60 23945.0 61 23692.0 62 21950.5 63 20209.0 64 17257.0 65 14305.0 66 11546.0 67 8787.0 68 7404.5 69 6022.0 70 4977.0 71 3932.0 72 3458.0 73 2984.0 74 2330.5 75 1326.5 76 976.0 77 724.5 78 473.0 79 341.5 80 210.0 81 151.5 82 93.0 83 69.0 84 45.0 85 28.5 86 12.0 87 10.5 88 9.0 89 5.0 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 812159.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.8369569321011 #Duplication Level Percentage of deduplicated Percentage of total 1 80.33074826957228 32.00132559138406 2 7.119623422401422 5.6724826330196745 3 2.5781704087228214 3.0811939060772557 4 1.4870329926586208 2.3695547714061957 5 1.1064090778584534 2.203798539196645 6 0.912167719018381 2.1802791682432883 7 0.7699316931766733 2.1470214991217174 8 0.650908759195948 2.074417936545308 9 0.6181662125081596 2.216327470611085 >10 4.277734186400293 26.89617323718344 >50 0.07954467837549016 2.199780828312176 >100 0.062387964225563725 4.406519599696783 >500 0.0031193982112774905 0.8911210391827838 >1k 0.0028074583901497416 1.6798457966354585 >5k 9.358194633832472E-4 3.1141393448501695 >10k+ 3.119398211277491E-4 6.866018638533982 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 55252 6.803101363156721 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGC 8711 1.0725732276561608 No Hit GAATCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTC 8572 1.0554583523669625 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCG 7777 0.9575711160006846 No Hit GCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGC 2325 0.2862739931466622 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGTTCGGAT 1983 0.2441640122192822 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCT 1618 0.1992220735102363 No Hit GAACTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCT 1564 0.19257312915328156 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTC 1316 0.1620372365509709 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1293 0.15920527876930501 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGTTCGGATCGTA 1292 0.15908215017010216 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 1098 0.13519520192474627 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 1029 0.12669932857974853 No Hit CCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGC 988 0.12165105601243108 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGAGCTCCGATCGAATGC 870 0.10712188130649294 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA 866 0.10662936690968147 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.156429960143272E-4 0.0 0.0 0.09099203481091757 0.0 2 6.156429960143272E-4 0.0 0.0 0.5686078711188326 0.0 3 7.387715952171927E-4 0.0 0.0 0.7593340712840713 0.0 4 7.387715952171927E-4 0.0 0.0 1.1353688132496222 0.0 5 7.387715952171927E-4 0.0 0.0 2.725205286157021 0.0 6 8.619001944200581E-4 0.0 0.0 3.1475363814228494 0.0 7 8.619001944200581E-4 0.0 0.0 3.6580275537179294 0.0 8 8.619001944200581E-4 0.0 0.0 4.25101488747893 0.0 9 8.619001944200581E-4 0.0 0.0 4.429428227723881 0.0 10 8.619001944200581E-4 0.0 0.0 5.781872761368156 0.0 11 8.619001944200581E-4 0.0 0.0 6.363409135403289 0.0 12 8.619001944200581E-4 0.0 0.0 7.930589946057361 0.0 13 8.619001944200581E-4 0.0 0.0 8.18017161664157 0.0 14 9.850287936229237E-4 0.0 0.0 8.310195417399795 0.0 15 0.001108157392825789 0.0 0.0 8.629591003732028 0.0 16 0.001108157392825789 0.0 0.0 8.965239565159038 0.0 17 0.001108157392825789 0.0 0.0 9.30002622639163 0.0 18 0.001108157392825789 0.0 0.0 9.635551659219438 0.0 19 0.001108157392825789 0.0 0.0 10.150598589685025 0.0 20 0.0012312859920286545 0.0 0.0 10.422343408125748 0.0 21 0.0013544145912315199 0.0 0.0 10.701106556721037 0.0 22 0.0013544145912315199 0.0 0.0 11.074186212305719 0.0 23 0.0013544145912315199 0.0 0.0 11.355042547087455 0.0 24 0.0013544145912315199 0.0 0.0 11.607825561250937 0.0 25 0.0013544145912315199 0.0 0.0 11.822069323863923 0.0 26 0.0013544145912315199 0.0 0.0 12.025108383949448 0.0 27 0.0013544145912315199 0.0 0.0 12.295252530600536 0.0 28 0.0013544145912315199 0.0 0.0 12.506541206832653 0.0 29 0.0013544145912315199 0.0 0.0 12.724109441624115 0.0 30 0.0013544145912315199 0.0 0.0 12.977754355982018 0.0 31 0.0013544145912315199 0.0 0.0 13.205296007308913 0.0 32 0.0013544145912315199 0.0 0.0 13.434315201826243 0.0 33 0.0013544145912315199 0.0 0.0 13.651637179419302 0.0 34 0.0013544145912315199 0.0 0.0 13.86132518386178 0.0 35 0.0013544145912315199 0.0 0.0 14.081848505034113 0.0 36 0.0013544145912315199 0.0 0.0 14.326997546047018 0.0 37 0.0014775431904343855 0.0 0.0 14.566605800095793 0.0 38 0.0014775431904343855 0.0 0.0 14.810154169319063 0.0 39 0.0014775431904343855 0.0 0.0 15.038927106637987 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGACG 20 7.032063E-4 45.0 1 TTACGAG 20 7.032063E-4 45.0 1 TGCGTAG 20 7.032063E-4 45.0 1 CTTACCG 20 7.032063E-4 45.0 1 CGTTTTT 30710 0.0 44.41387 1 GATGAAT 1795 0.0 41.866295 20 CGATGAA 1705 0.0 41.832844 19 ATGAATG 1800 0.0 41.75 21 CCGATGA 1655 0.0 41.73716 18 TACGGCT 990 0.0 41.59091 7 CGATCGA 260 0.0 41.53846 41 ACGGCTG 995 0.0 41.381912 8 CGTAAGG 55 6.002665E-11 40.909092 2 GTTTTTT 33875 0.0 40.43026 2 ACCGATG 1725 0.0 40.173912 17 ATCGAAT 265 0.0 39.905663 43 CTCCGAT 210 0.0 39.642857 38 CGACCCG 80 0.0 39.375 32 CGGCTGT 1090 0.0 39.013763 9 CGGGTAT 35 6.246024E-6 38.57143 6 >>END_MODULE