##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935663.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 485718 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.48012426963794 34.0 31.0 34.0 31.0 34.0 2 32.684246826347795 34.0 31.0 34.0 31.0 34.0 3 32.52361040768512 34.0 31.0 34.0 31.0 34.0 4 36.129457833557744 37.0 37.0 37.0 35.0 37.0 5 36.13824688399442 37.0 35.0 37.0 35.0 37.0 6 36.142181265672676 37.0 37.0 37.0 35.0 37.0 7 36.27742434910792 37.0 37.0 37.0 35.0 37.0 8 36.09552456363569 37.0 37.0 37.0 35.0 37.0 9 37.902206630184594 39.0 38.0 39.0 35.0 39.0 10 37.74792369234824 39.0 38.0 39.0 35.0 39.0 11 37.70635636315722 39.0 38.0 39.0 35.0 39.0 12 37.56626478738692 39.0 37.0 39.0 35.0 39.0 13 37.53422356181982 39.0 37.0 39.0 35.0 39.0 14 38.79945565122149 41.0 38.0 41.0 35.0 41.0 15 38.925611157091154 41.0 39.0 41.0 35.0 41.0 16 39.02070337109187 41.0 39.0 41.0 35.0 41.0 17 39.01451459488839 41.0 39.0 41.0 35.0 41.0 18 38.34083151128844 39.0 38.0 40.0 35.0 41.0 19 37.63419926788795 37.0 37.0 40.0 35.0 41.0 20 36.81369024825104 35.0 35.0 40.0 34.0 41.0 21 36.753719236264665 35.0 35.0 40.0 33.0 41.0 22 36.75513981363672 35.0 35.0 40.0 34.0 41.0 23 36.76348210278392 35.0 35.0 40.0 34.0 41.0 24 36.60721653305004 35.0 35.0 40.0 34.0 41.0 25 36.50722641532741 35.0 35.0 40.0 33.0 41.0 26 36.352251718075095 35.0 35.0 40.0 33.0 41.0 27 36.26696972317271 35.0 35.0 40.0 33.0 41.0 28 36.12186083282892 35.0 35.0 40.0 33.0 41.0 29 35.83079070571813 35.0 35.0 40.0 33.0 41.0 30 35.287158392318176 35.0 35.0 40.0 31.0 41.0 31 34.57073240028164 35.0 35.0 40.0 23.0 41.0 32 33.53157593500755 35.0 33.0 40.0 17.0 41.0 33 32.33454391231126 35.0 32.0 40.0 12.0 41.0 34 31.306605890660837 35.0 28.0 40.0 8.0 41.0 35 30.667916362992518 35.0 23.0 40.0 7.0 41.0 36 30.300577701464636 35.0 22.0 40.0 7.0 41.0 37 30.10025570392697 35.0 21.0 40.0 7.0 41.0 38 29.904133674271904 35.0 21.0 40.0 7.0 41.0 39 29.736509661984936 35.0 20.0 40.0 7.0 41.0 40 29.555106049189035 35.0 19.0 40.0 7.0 41.0 41 29.36489485668639 35.0 18.0 40.0 7.0 41.0 42 29.26008095232213 35.0 18.0 40.0 7.0 41.0 43 29.163728747956633 35.0 18.0 40.0 7.0 41.0 44 29.04862286347222 35.0 18.0 40.0 7.0 41.0 45 29.010355803161506 35.0 18.0 40.0 7.0 41.0 46 29.01302195924384 35.0 18.0 40.0 7.0 41.0 47 29.068535652374422 35.0 20.0 39.0 7.0 41.0 48 29.037733829094247 35.0 20.0 39.0 7.0 41.0 49 29.03045388476441 35.0 20.0 39.0 7.0 41.0 50 28.91144244191074 35.0 20.0 39.0 7.0 41.0 51 28.28742809613809 34.0 18.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 6.0 10 7.0 11 11.0 12 13.0 13 21.0 14 16.0 15 34.0 16 59.0 17 136.0 18 297.0 19 515.0 20 883.0 21 1339.0 22 2382.0 23 4050.0 24 8119.0 25 16261.0 26 26747.0 27 31170.0 28 28392.0 29 21090.0 30 15980.0 31 13645.0 32 13545.0 33 16164.0 34 27282.0 35 33258.0 36 33768.0 37 34016.0 38 58268.0 39 98122.0 40 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.865831614228835 12.850254674523075 14.657064387154687 46.626849324093406 2 59.83533655330871 14.237067598894832 15.246501056168393 10.681094791628064 3 20.146669466645257 14.828974837251243 54.12811549088155 10.896240205221961 4 18.140155398811654 16.010318744621365 53.833294215985404 12.016231640581571 5 16.02370099522768 18.09980276621414 53.65788379265335 12.218612445904824 6 16.736872012155203 20.652106778006992 52.90477190468543 9.706249305152372 7 50.33517390749365 3.6706484009239935 42.763290633659864 3.2308870579224984 8 51.32010755211872 2.838066532432399 42.67867363367222 3.163152281776669 9 47.65851790545131 4.001498812067908 44.11510382567663 4.224879456804153 10 28.053109005637015 13.898599598944244 48.36057136033666 9.687720035082084 11 20.880428561428648 14.887239097583372 52.02936683425362 12.20296550673436 12 18.757385972930795 13.436191370301287 54.499936176958656 13.306486479809271 13 17.047546107000358 13.147546518761915 56.47495048567276 13.32995688856497 14 14.058980725441511 14.247979280158447 57.621088779909336 14.071951214490714 15 13.256251569840938 14.480418679151278 58.50267027369791 13.760659477309881 16 16.889223788288675 14.993473579319689 55.51925191160303 12.598050720788606 17 16.90981186614455 15.272236153488238 54.435289612491204 13.38266236787601 18 17.139163053459004 14.841945326300445 55.13590190192663 12.882989718313919 19 16.564755681280086 16.557961615587647 53.68444241308743 13.192840290044842 20 16.381521788362797 17.564512741961387 53.295739503168505 12.758225966507315 21 16.221346542644085 16.561255708044587 55.05149078271755 12.165906966593786 22 15.799908588934318 14.429154365290147 55.66975076072948 14.101186285046055 23 15.009738160825828 15.748850155851748 55.42578203813735 13.815629645185066 24 15.288912496551497 15.89379022395711 54.87875680950675 13.938540469984643 25 16.6510197274962 15.793732165577556 53.32497457372385 14.230273533202393 26 14.81497494430925 15.610910034217385 53.605384194120866 15.968730827352498 27 14.54732993218287 15.208001350577907 55.45213477779287 14.792533939446345 28 14.296361263119753 16.134464854092293 53.690412955665636 15.87876092712232 29 15.200177880992674 17.178280401385166 52.81603728912662 14.805504428495547 30 16.93348815567881 15.521351895544328 52.92556586331987 14.619594085456994 31 16.751283666654313 16.524608929461127 51.89430904351908 14.829798360365478 32 18.054920756488333 17.608777109351518 49.26562326288093 15.07067887127922 33 18.600504819669027 19.341675622480533 46.366204258438025 15.691615299412417 34 17.28657369090707 21.674510724329753 45.239830518943094 15.799085065820083 35 18.270272050860786 23.986140105987424 41.79812154377643 15.945466299375358 36 20.657047916692402 24.873280380797087 38.81490906246011 15.654762640050398 37 20.31940343985605 25.400746935464614 37.901827809552046 16.378021815127298 38 21.192543821723717 24.59266487962151 37.774593488402736 16.440197810252037 39 20.602283629595775 23.636142782437545 37.35994960038541 18.401623987581274 40 21.703951675663657 22.85358994313573 38.2983541890562 17.144104192144415 41 20.003170563989805 23.380438855467574 37.68709415751527 18.929296423027353 42 20.317344632070462 23.771818215507764 38.17853157593501 17.732305576486766 43 19.555173989845958 23.377350643789192 38.67655717926863 18.39091818709622 44 20.068023009235812 23.160558183966828 38.32305988248325 18.44835892431411 45 19.41002804096204 22.450269497939132 38.47232344693835 19.66737901416048 46 18.632210459567077 22.708855755808926 39.4239044054369 19.2350293791871 47 17.883010306391775 22.81385495287389 40.750188380912384 18.552946359821952 48 17.795305094725748 22.839384169415176 40.74895309624103 18.61635763961805 49 18.916737695535268 22.00886110870917 40.67957127386673 18.394829921888835 50 17.45436652543245 22.380681794786277 41.16153817647277 19.003413503308504 51 17.460748829567773 21.852597597783074 40.89677549524621 19.789878077402935 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 180.0 1 336.5 2 493.0 3 29750.5 4 59008.0 5 38633.0 6 18258.0 7 17540.5 8 16823.0 9 16257.0 10 15691.0 11 15191.0 12 14691.0 13 13723.5 14 12756.0 15 11665.0 16 10574.0 17 9760.5 18 8947.0 19 8173.0 20 7399.0 21 6761.5 22 6124.0 23 5692.5 24 5261.0 25 5025.5 26 4805.5 27 4821.0 28 4920.0 29 5019.0 30 5277.5 31 5536.0 32 5931.0 33 6326.0 34 7167.0 35 8008.0 36 8335.5 37 8663.0 38 9231.5 39 9800.0 40 10309.0 41 10818.0 42 11740.0 43 12662.0 44 14022.5 45 15383.0 46 18020.0 47 20657.0 48 23910.0 49 27163.0 50 27691.0 51 28219.0 52 25715.5 53 23212.0 54 21833.5 55 20455.0 56 19583.0 57 18711.0 58 18300.0 59 17889.0 60 16818.0 61 15747.0 62 14223.5 63 12700.0 64 11386.0 65 10072.0 66 8935.0 67 7798.0 68 6716.0 69 5634.0 70 4647.0 71 3660.0 72 3016.5 73 2373.0 74 2012.0 75 1295.0 76 939.0 77 695.0 78 451.0 79 336.0 80 221.0 81 151.0 82 81.0 83 59.5 84 38.0 85 26.0 86 14.0 87 7.5 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 485718.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.95895071154324 #Duplication Level Percentage of deduplicated Percentage of total 1 77.30939720845592 37.84986967467911 2 7.876439072973299 7.71244384712346 3 4.026304160719216 5.913708808630007 4 2.719892327813792 5.3265229767256015 5 2.056600343129494 5.034449741630991 6 1.525269937150567 4.480536940485195 7 1.1844071124054687 4.059113060706241 8 0.8727136757590409 3.4181716669421283 9 0.6398906030501217 2.819553524595952 >10 1.6986868171274299 11.218947166992505 >50 0.06463087587575468 2.196989056177856 >100 0.0236557454136782 2.210845618646516 >500 0.0016896961009770144 0.5052475066747838 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 4.224240252442536E-4 7.25360040998964 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 35073 7.220856546391116 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 682 0.140410690977069 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 628 0.1292931289348964 No Hit CGCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCGTCTTCTG 621 0.12785196348498512 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 512 0.10541095862208112 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.235231142350088E-4 0.0 0.0 0.04941138685410053 0.0 2 8.235231142350088E-4 0.0 0.0 0.17643982722485063 0.0 3 8.235231142350088E-4 0.0 0.0 0.3961146179470392 0.0 4 8.235231142350088E-4 0.0 0.0 0.5935542845848826 0.0 5 8.235231142350088E-4 0.0 0.0 1.0571977978991924 0.0 6 8.235231142350088E-4 0.0 0.0 1.7022222771237632 0.0 7 8.235231142350088E-4 0.0 0.0 2.286306045894943 0.0 8 8.235231142350088E-4 0.0 0.0 3.152858242848731 0.0 9 8.235231142350088E-4 0.0 0.0 3.812088495793856 0.0 10 8.235231142350088E-4 0.0 0.0 4.499524415401529 0.0 11 8.235231142350088E-4 0.0 0.0 5.158754668346654 0.0 12 8.235231142350088E-4 0.0 0.0 5.627133439567815 0.0 13 8.235231142350088E-4 0.0 0.0 5.849896441968385 0.0 14 8.235231142350088E-4 0.0 0.0 6.037453831235408 0.0 15 8.235231142350088E-4 0.0 0.0 6.180540972333741 0.0 16 8.235231142350088E-4 0.0 0.0 6.353686707101652 0.0 17 8.235231142350088E-4 0.0 0.0 6.5395970501402045 0.0 18 0.001029403892793761 0.0 0.0 6.762565933319333 0.0 19 0.001029403892793761 0.0 0.0 6.899682531839463 0.0 20 0.001029403892793761 0.0 0.0 7.056975446658349 0.0 21 0.001029403892793761 0.0 0.0 7.247209286046636 0.0 22 0.001029403892793761 0.0 0.0 7.4545312300552995 0.0 23 0.001029403892793761 0.0 0.0 7.646000354114939 0.0 24 0.001029403892793761 0.0 0.0 7.819351969661408 0.0 25 0.001029403892793761 0.0 0.0 7.973350792023355 0.0 26 0.001029403892793761 0.0 0.0 8.116643813900247 0.0 27 0.001029403892793761 0.0 0.0 8.301936514603124 0.0 28 0.001029403892793761 0.0 0.0 8.465611733557331 0.0 29 0.0012352846713525132 0.0 0.0 8.646786818689034 0.0 30 0.0012352846713525132 0.0 0.0 8.909284811351442 0.0 31 0.0012352846713525132 0.0 0.0 9.10425390864658 0.0 32 0.0012352846713525132 0.0 0.0 9.312605256548038 0.0 33 0.0012352846713525132 0.0 0.0 9.506133188393266 0.0 34 0.0012352846713525132 0.0 0.0 9.705425782038137 0.0 35 0.0012352846713525132 0.0 0.0 9.920365314853475 0.0 36 0.0012352846713525132 0.0 0.0 10.135304847668811 0.0 37 0.0012352846713525132 0.0 0.0 10.368773650554436 0.0 38 0.0012352846713525132 0.0 0.0 10.662153760000658 0.0 39 0.0012352846713525132 0.0 0.0 11.192296764789445 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 35 1.2099918E-7 45.000004 31 TTTCGCG 20 7.029261E-4 45.0 1 GTAGCCG 20 7.029261E-4 45.0 43 TGCGATG 25 3.8874674E-5 45.0 1 TAGGACG 25 3.8874674E-5 45.0 1 CGTTTTT 19100 0.0 44.458115 1 CGAATAT 55 6.002665E-11 40.909092 14 GCTACGA 55 6.002665E-11 40.909092 10 GTTTTTT 21100 0.0 40.382706 2 ACAACGA 95 0.0 40.263157 13 AGCGACT 95 0.0 40.263157 19 TCACGAC 40 3.452733E-7 39.375 25 CTCACGA 40 3.452733E-7 39.375 24 ATAGGGT 35 6.24084E-6 38.57143 4 AACGAGC 100 0.0 38.25 15 CACAACG 100 0.0 38.25 12 ATAGGGA 150 0.0 37.500004 4 CGATTGA 30 1.13895156E-4 37.499996 10 ACGGGTC 30 1.13895156E-4 37.499996 5 CTACGAA 60 1.546141E-10 37.499996 11 >>END_MODULE