##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935658.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 417170 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09862406213294 33.0 31.0 34.0 30.0 34.0 2 32.310170913536446 34.0 31.0 34.0 30.0 34.0 3 32.18328738883429 33.0 31.0 34.0 30.0 34.0 4 35.870045784692095 37.0 35.0 37.0 35.0 37.0 5 35.90937267780521 37.0 35.0 37.0 35.0 37.0 6 35.92218759738236 37.0 35.0 37.0 35.0 37.0 7 36.12121197593307 37.0 35.0 37.0 35.0 37.0 8 35.829208715871225 37.0 35.0 37.0 35.0 37.0 9 37.67327228707721 39.0 38.0 39.0 35.0 39.0 10 37.40999832202699 39.0 37.0 39.0 34.0 39.0 11 37.442114725411706 39.0 37.0 39.0 34.0 39.0 12 37.456528513555625 39.0 37.0 39.0 35.0 39.0 13 37.44158017115325 39.0 37.0 39.0 35.0 39.0 14 38.80237313325503 40.0 38.0 41.0 35.0 41.0 15 38.875441666466905 40.0 38.0 41.0 35.0 41.0 16 38.96291439940552 41.0 38.0 41.0 35.0 41.0 17 38.898770285495125 40.0 38.0 41.0 35.0 41.0 18 38.305371910731836 39.0 38.0 40.0 35.0 41.0 19 37.62415082580243 37.0 37.0 40.0 35.0 41.0 20 36.81225879138001 37.0 35.0 40.0 34.0 41.0 21 36.82091713210442 37.0 35.0 40.0 33.0 41.0 22 36.8339382026512 37.0 35.0 40.0 33.0 41.0 23 36.80322170817652 37.0 35.0 40.0 33.0 41.0 24 36.65515017858427 36.0 35.0 40.0 33.0 41.0 25 36.60066879209914 36.0 35.0 40.0 33.0 41.0 26 36.445156650765874 36.0 35.0 40.0 33.0 41.0 27 36.33004290816694 36.0 35.0 40.0 33.0 41.0 28 36.20401514969917 36.0 35.0 40.0 33.0 41.0 29 36.00098520986648 36.0 35.0 40.0 32.0 41.0 30 35.516707816957116 36.0 35.0 40.0 30.0 41.0 31 34.94642232183522 36.0 35.0 40.0 25.0 41.0 32 33.87318838842678 36.0 34.0 40.0 18.0 41.0 33 32.67214085384855 36.0 33.0 40.0 12.0 41.0 34 31.633856701105064 36.0 29.0 40.0 8.0 41.0 35 30.98085432797181 36.0 23.0 40.0 7.0 41.0 36 30.616755759043077 36.0 22.0 40.0 7.0 41.0 37 30.44086823117674 35.0 22.0 40.0 7.0 41.0 38 30.341462713042645 35.0 21.0 40.0 7.0 41.0 39 30.22774887935374 35.0 21.0 40.0 7.0 41.0 40 30.16130114821296 35.0 21.0 40.0 7.0 41.0 41 29.97718675839586 35.0 21.0 40.0 7.0 41.0 42 29.851861351487404 35.0 20.0 40.0 7.0 41.0 43 29.749394731164752 35.0 18.0 40.0 7.0 41.0 44 29.64937315722607 35.0 18.0 40.0 7.0 41.0 45 29.57914279550303 35.0 20.0 40.0 7.0 41.0 46 29.498719946304863 35.0 20.0 40.0 7.0 41.0 47 29.4286406021526 35.0 20.0 40.0 7.0 41.0 48 29.36795311263993 35.0 20.0 40.0 7.0 41.0 49 29.33159862885634 35.0 18.0 40.0 7.0 41.0 50 29.177452836972936 35.0 18.0 40.0 7.0 41.0 51 28.526480811180093 35.0 18.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 2.0 10 3.0 11 3.0 12 2.0 13 2.0 14 14.0 15 31.0 16 50.0 17 110.0 18 230.0 19 479.0 20 845.0 21 1402.0 22 2322.0 23 3956.0 24 7441.0 25 14791.0 26 23508.0 27 26177.0 28 21934.0 29 16454.0 30 12970.0 31 11658.0 32 11799.0 33 13115.0 34 18564.0 35 26054.0 36 27595.0 37 30412.0 38 53308.0 39 91851.0 40 79.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.3244240956924 13.66109739434763 15.20651053527339 42.807967974686576 2 55.638229019344635 17.876645012824508 15.798355586451565 10.686770381379294 3 18.385070834432007 17.74432485557447 52.842006855718296 11.028597454275236 4 16.42807488553827 15.632715679459213 56.10087014886018 11.83833928614234 5 17.36246614090179 17.664261572020997 52.3043363616751 12.668935925402113 6 14.88314116547211 23.35067238775559 51.90066399789055 9.865522448881752 7 48.27839969317065 3.197976843972481 44.447347604094254 4.076275858762615 8 47.87712443368411 4.930124409713066 42.20413740201836 4.9886137545844615 9 44.51158999928087 3.687225831195915 43.44583742838651 8.355346741136707 10 24.424814823692977 13.024426492796701 49.733202291631706 12.81755639187861 11 18.191145096723158 15.41314092576168 51.93518229978187 14.460531677733298 12 15.534913824100485 13.612675887527868 54.96919720977059 15.883213078601049 13 14.741232591030034 15.447659227652997 57.68967087757988 12.121437303737086 14 12.413884028094062 18.933048876956637 54.36632547882159 14.286741616127719 15 11.008461778171968 17.25411702663183 58.232135580219094 13.505285614977108 16 12.204856533307765 16.7965098161421 54.80379701320805 16.194836637342092 17 12.21875973823621 17.871850804228494 53.7730421650646 16.136347292470695 18 12.72718555984371 17.3948270489249 54.612028669367405 15.265958721863987 19 12.473571925114461 19.520579140398397 52.75762878442841 15.248220150058728 20 13.573842797900138 18.398974039360454 54.026176378934245 14.001006783805165 21 12.421315051417887 20.64721816046216 53.410839705635595 13.52062708248436 22 11.704101445453892 16.656279214708633 53.34587817915958 18.2937411606779 23 11.921279094853416 19.033727257472975 52.99158616391399 16.053407483759617 24 13.407963180477983 16.9451302826186 53.356904858930406 16.29000167797301 25 11.99079511949565 20.090850252894505 51.30210705467795 16.616247572931897 26 11.406381091641297 17.891507059472158 53.81690917371815 16.885202675168394 27 13.722702974806433 17.77620634273797 52.20701392717597 16.294076755279622 28 11.075340988086392 17.404175755687127 53.58127382122396 17.939209435002518 29 12.30865114941151 16.130594242155478 52.02291631708895 19.537838291344055 30 12.294987654912866 18.03940839465925 52.25016180454012 17.41544214588777 31 11.919601121844812 18.444519021022604 49.02078289426373 20.615096962868854 32 12.79981782007335 21.62355874104082 46.81089244193014 18.765730996955675 33 12.510727041733585 20.026128436848285 45.37215044226574 22.090994079152384 34 12.352038737205456 20.93175444063571 43.98686386844692 22.729342953711917 35 13.113119351822997 22.965937147925306 41.9152863341084 22.0056571661433 36 13.306325958242443 23.116954718699812 40.06448210561642 23.51223721744133 37 13.415394203801808 24.377591869022222 42.31320564757773 19.893808279598247 38 13.25430879497567 25.149219742550997 38.70316657477767 22.893304887695663 39 15.096483447994821 23.360021094517823 40.064002684756815 21.47949277273054 40 14.988613754584462 22.79358534889853 41.65208428218712 20.56571661432989 41 13.966009061054246 23.685787568617112 39.752379126015775 22.59582424431287 42 14.722774887935374 23.58654745067958 40.04482585037275 21.6458518110123 43 15.678500371551166 22.072776086487522 39.32521514011075 22.923508401850565 44 15.555049500203754 22.061509696286883 38.755183738044444 23.62825706546492 45 15.212743006448209 20.924802838171487 39.39664884819138 24.465805307188916 46 16.979648584509913 22.115684253421865 39.29740873025385 21.60725843181437 47 13.418510439389216 21.536064434163528 43.05606826953041 21.989356856916846 48 14.1616127717717 21.08061461754201 41.01493395977659 23.7428386509097 49 14.584222259510513 19.645468274324614 42.52750677181964 23.24280269434523 50 14.34403240885011 18.908838123546758 42.317280724884334 24.429848742718796 51 14.242874607474171 19.15885610182899 39.53136610973944 27.066903180957404 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 116.0 1 207.5 2 299.0 3 21162.5 4 42026.0 5 28160.0 6 14294.0 7 13848.0 8 13402.0 9 13090.0 10 12778.0 11 12519.0 12 12260.0 13 11613.5 14 10967.0 15 10349.0 16 9731.0 17 8934.5 18 8138.0 19 7621.0 20 7104.0 21 6523.0 22 5942.0 23 5541.5 24 5141.0 25 4752.0 26 4201.5 27 4040.0 28 4055.5 29 4071.0 30 4205.5 31 4340.0 32 4756.0 33 5172.0 34 5651.0 35 6130.0 36 6697.5 37 7265.0 38 8068.0 39 8871.0 40 9783.0 41 10695.0 42 12540.5 43 14386.0 44 17022.0 45 19658.0 46 29734.0 47 39810.0 48 39268.0 49 38726.0 50 37518.5 51 36311.0 52 29254.0 53 22197.0 54 18089.0 55 13981.0 56 11740.5 57 9500.0 58 8100.0 59 6700.0 60 6124.5 61 5549.0 62 4860.0 63 4171.0 64 3463.0 65 2755.0 66 2358.5 67 1962.0 68 1802.5 69 1643.0 70 1282.5 71 922.0 72 805.5 73 689.0 74 586.5 75 403.0 76 322.0 77 218.5 78 115.0 79 93.5 80 72.0 81 47.5 82 23.0 83 19.0 84 15.0 85 16.0 86 17.0 87 16.0 88 15.0 89 8.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 417170.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.704635803230026 #Duplication Level Percentage of deduplicated Percentage of total 1 84.1574901059134 44.35489866146101 2 7.741801854376552 8.16057694391374 3 2.4540869154997114 3.8802527133265334 4 1.2510046035361206 2.6373496807014165 5 0.7347468988179086 1.9362283854875288 6 0.5417913102053171 1.713294821143564 7 0.441208739927724 1.6277622165764911 8 0.3647837004263534 1.5380633662340417 9 0.3053065822791243 1.4481965004615114 >10 1.9000141450364587 16.130912733145554 >50 0.07337201292347048 2.5776273289769542 >100 0.0270559297655148 2.762278738196419 >500 0.004127175726942936 1.6691133927714121 >1k 0.002751450484628624 2.9851172189573867 >5k 0.0 0.0 >10k+ 4.5857508077143736E-4 6.578327298646437 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27218 6.524438478318191 No Hit GAATCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTC 2879 0.690126327396505 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGC 2816 0.6750245703190546 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCG 2366 0.5671548769086943 No Hit GCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGC 1692 0.40559004722295466 TruSeq Adapter, Index 23 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTG 1527 0.36603782630582254 TruSeq Adapter, Index 20 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGC 1071 0.2567298703166575 TruSeq Adapter, Index 23 (95% over 22bp) CGTTTCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTT 985 0.23611477335378864 No Hit CGTTCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTC 952 0.22820432917036218 No Hit CTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGCT 886 0.21238344080350938 TruSeq Adapter, Index 20 (95% over 23bp) CGTCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCT 823 0.1972816837260589 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCT 822 0.19704197329625814 No Hit GAACTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCT 651 0.1560514898003212 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTCACTACT 622 0.149099887336098 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 605 0.14502481002948436 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCT 560 0.13423784068844835 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCC 471 0.11290361243617711 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 461 0.1105065081381691 No Hit TCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGC 436 0.10451374739314909 TruSeq Adapter, Index 23 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 426 0.10211664309514107 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.191312894024019E-4 0.0 0.0 0.2226909892849438 0.0 2 7.191312894024019E-4 0.0 0.0 1.0964355059088622 0.0 3 7.191312894024019E-4 0.0 0.0 1.807176930268236 0.0 4 7.191312894024019E-4 0.0 0.0 2.6744492652875325 0.0 5 7.191312894024019E-4 0.0 0.0 4.977587074813625 0.0 6 7.191312894024019E-4 0.0 0.0 6.415609943188628 0.0 7 7.191312894024019E-4 0.0 0.0 7.719394970875182 0.0 8 7.191312894024019E-4 0.0 0.0 9.549104681544694 0.0 9 7.191312894024019E-4 0.0 0.0 10.276386125560323 0.0 10 7.191312894024019E-4 0.0 0.0 12.315602751875733 0.0 11 7.191312894024019E-4 0.0 0.0 14.147949277273055 0.0 12 7.191312894024019E-4 0.0 0.0 16.11405422249922 0.0 13 7.191312894024019E-4 0.0 0.0 16.798427499580505 0.0 14 7.191312894024019E-4 0.0 0.0 17.076012177289833 4.7942085960160126E-4 15 7.191312894024019E-4 0.0 0.0 17.547282882278207 4.7942085960160126E-4 16 7.191312894024019E-4 0.0 0.0 18.438046839417982 4.7942085960160126E-4 17 7.191312894024019E-4 0.0 0.0 19.456576455641585 4.7942085960160126E-4 18 7.191312894024019E-4 0.0 0.0 20.52712323513196 4.7942085960160126E-4 19 7.191312894024019E-4 0.0 0.0 21.314571997027592 4.7942085960160126E-4 20 9.588417192032025E-4 0.0 0.0 21.93086751204545 4.7942085960160126E-4 21 9.588417192032025E-4 0.0 0.0 22.746362394227774 4.7942085960160126E-4 22 9.588417192032025E-4 0.0 0.0 23.582712083802765 4.7942085960160126E-4 23 9.588417192032025E-4 0.0 0.0 24.485701272862382 4.7942085960160126E-4 24 9.588417192032025E-4 0.0 0.0 25.122132463983508 4.7942085960160126E-4 25 9.588417192032025E-4 0.0 0.0 25.737229426852362 4.7942085960160126E-4 26 9.588417192032025E-4 0.0 0.0 26.26315410983532 4.7942085960160126E-4 27 9.588417192032025E-4 0.0 0.0 26.813529256657958 4.7942085960160126E-4 28 9.588417192032025E-4 0.0 0.0 27.362945561761393 4.7942085960160126E-4 29 9.588417192032025E-4 0.0 0.0 27.9051705539708 4.7942085960160126E-4 30 9.588417192032025E-4 0.0 0.0 28.47927703334372 4.7942085960160126E-4 31 9.588417192032025E-4 0.0 0.0 29.059615983891458 4.7942085960160126E-4 32 9.588417192032025E-4 0.0 0.0 29.603518949109475 4.7942085960160126E-4 33 9.588417192032025E-4 0.0 0.0 30.12848479037323 4.7942085960160126E-4 34 9.588417192032025E-4 0.0 0.0 30.578900687968932 4.7942085960160126E-4 35 9.588417192032025E-4 0.0 0.0 31.05113023467651 4.7942085960160126E-4 36 0.0011985521490040032 0.0 0.0 31.518086151928472 4.7942085960160126E-4 37 0.0011985521490040032 0.0 0.0 32.00397919313469 4.7942085960160126E-4 38 0.0011985521490040032 0.0 0.0 32.437615360644344 4.7942085960160126E-4 39 0.0011985521490040032 0.0 0.0 32.88635328523144 4.7942085960160126E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGA 30 2.1621636E-6 45.000004 13 CGGCGAA 30 2.1621636E-6 45.000004 31 TCACGAC 20 7.0281135E-4 45.0 25 CTTAAGG 25 3.8865182E-5 45.0 2 AACGTTG 20 7.0281135E-4 45.0 1 GTGTTCG 20 7.0281135E-4 45.0 1 CTCACGA 20 7.0281135E-4 45.0 24 ACTGCGG 20 7.0281135E-4 45.0 2 CGATTGT 20 7.0281135E-4 45.0 10 CACGACG 20 7.0281135E-4 45.0 26 AGGCGAC 20 7.0281135E-4 45.0 9 AACGGGC 25 3.8865182E-5 45.0 4 TACGCGG 20 7.0281135E-4 45.0 2 TGTTCGG 25 3.8865182E-5 45.0 2 CGGTCTA 20 7.0281135E-4 45.0 31 AAGGCGA 20 7.0281135E-4 45.0 8 CGTTTCT 135 0.0 45.0 1 CGCCCAC 20 7.0281135E-4 45.0 34 TGCGTAG 20 7.0281135E-4 45.0 1 CGTTTTT 14570 0.0 44.59849 1 >>END_MODULE