##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935657.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 468054 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38685493554163 33.0 31.0 34.0 30.0 34.0 2 32.58142436556466 34.0 31.0 34.0 31.0 34.0 3 32.45269349263119 34.0 31.0 34.0 30.0 34.0 4 36.06860105885218 37.0 35.0 37.0 35.0 37.0 5 36.09463010678255 37.0 35.0 37.0 35.0 37.0 6 36.118174398680495 37.0 36.0 37.0 35.0 37.0 7 36.28600332440274 37.0 37.0 37.0 35.0 37.0 8 36.034218273959844 37.0 37.0 37.0 35.0 37.0 9 37.881043640263734 39.0 38.0 39.0 35.0 39.0 10 37.7243971849402 39.0 38.0 39.0 35.0 39.0 11 37.638481884568876 39.0 37.0 39.0 35.0 39.0 12 37.66054130506309 39.0 37.0 39.0 35.0 39.0 13 37.68236998295068 39.0 38.0 39.0 35.0 39.0 14 39.11747148833254 41.0 39.0 41.0 35.0 41.0 15 39.1939199323155 41.0 39.0 41.0 35.0 41.0 16 39.26367684070642 41.0 39.0 41.0 35.0 41.0 17 39.20138274643524 41.0 39.0 41.0 35.0 41.0 18 38.58389630256338 39.0 39.0 41.0 35.0 41.0 19 37.925867528105734 38.0 37.0 41.0 35.0 41.0 20 37.108970332483004 37.0 35.0 41.0 34.0 41.0 21 37.127425468001555 37.0 35.0 41.0 34.0 41.0 22 37.12985040187671 37.0 35.0 41.0 34.0 41.0 23 37.10044353856606 37.0 35.0 41.0 34.0 41.0 24 36.96714268011811 37.0 35.0 41.0 34.0 41.0 25 36.931943750080116 37.0 35.0 41.0 34.0 41.0 26 36.75350066445325 37.0 35.0 41.0 33.0 41.0 27 36.657229721356934 37.0 35.0 40.0 33.0 41.0 28 36.528409115187564 37.0 35.0 40.0 33.0 41.0 29 36.306763749481895 37.0 35.0 40.0 33.0 41.0 30 35.814350480927416 37.0 35.0 40.0 31.0 41.0 31 35.16243211253403 37.0 35.0 40.0 25.0 41.0 32 34.10403500450803 37.0 34.0 40.0 18.0 41.0 33 32.951153072081425 37.0 33.0 40.0 12.0 41.0 34 31.977444910202667 37.0 30.0 41.0 8.0 41.0 35 31.42668794626261 37.0 25.0 41.0 7.0 41.0 36 31.099020625825226 37.0 23.0 41.0 7.0 41.0 37 30.889931503629924 37.0 23.0 40.0 7.0 41.0 38 30.75005448089323 36.0 23.0 40.0 7.0 41.0 39 30.641876791994086 36.0 22.0 40.0 7.0 41.0 40 30.53383797596004 36.0 22.0 40.0 7.0 41.0 41 30.402139496724736 36.0 21.0 40.0 7.0 41.0 42 30.261497604977205 36.0 21.0 40.0 7.0 41.0 43 30.112566071436202 36.0 20.0 40.0 7.0 41.0 44 30.01150721925248 36.0 18.0 40.0 7.0 41.0 45 29.94421370183782 35.0 20.0 40.0 7.0 41.0 46 29.864075512654523 35.0 20.0 40.0 7.0 41.0 47 29.815004251646176 35.0 20.0 40.0 7.0 41.0 48 29.795974396116687 35.0 20.0 40.0 7.0 41.0 49 29.766907237199128 35.0 20.0 40.0 7.0 41.0 50 29.63057254077521 35.0 20.0 40.0 7.0 41.0 51 29.072173296243594 35.0 19.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 6.0 11 4.0 12 5.0 13 3.0 14 8.0 15 19.0 16 38.0 17 103.0 18 189.0 19 442.0 20 788.0 21 1401.0 22 2225.0 23 3780.0 24 7448.0 25 14728.0 26 24570.0 27 28628.0 28 25973.0 29 19828.0 30 14574.0 31 12427.0 32 11608.0 33 12315.0 34 17664.0 35 26717.0 36 27816.0 37 29584.0 38 58913.0 39 126108.0 40 136.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.45131971951954 13.562110354788123 15.709512150307441 43.27705777538489 2 55.40899127023805 17.65245035829199 15.967388378264047 10.971169993205912 3 19.923555829028274 17.942587821063384 51.48743521046717 10.646421139441175 4 17.658859875142614 16.53612617347571 53.886517367654164 11.918496583727519 5 18.55405572861251 18.434625064629294 50.375597687446316 12.635721519311874 6 16.525443645391345 23.10652189704607 50.2157870673042 10.152247390258388 7 52.238630585359815 3.070158571446884 41.635580509941164 3.055630333252146 8 52.668922816598084 4.5353741234985705 39.57556179415196 3.2201412657513875 9 48.89478564439146 4.993868228879574 40.32825272297641 5.7830934037525585 10 23.914761971909222 23.686369521465473 44.65189913984284 7.746969366782465 11 17.34009323710512 16.070367948997337 54.64540416276754 11.944134651129998 12 16.34362701739543 14.59489716998466 55.42052840056917 13.640947412050746 13 15.073260777602584 15.38390869429596 57.136569712041776 12.406260816059685 14 12.342165647553488 19.747721416759607 53.75875433176513 14.151358603921771 15 11.154909476257014 18.06265943673166 57.90101142175903 12.8814196652523 16 12.914749152875524 17.65586876727899 55.20281847820978 14.226563601635709 17 12.950642447238994 18.019074722147444 54.391373644921316 14.63890918569225 18 13.310002691997077 17.451618830305904 54.86140488063344 14.376973597063586 19 13.945613113016876 18.35899276579198 53.52566156896427 14.169732552226879 20 16.664316510488106 17.754788977340223 54.179004986604106 11.401889525567563 21 14.784191567639631 18.898887735175858 53.626290983519 12.690629713665516 22 13.36576548859747 16.46583513868058 54.595623581894394 15.572775790827553 23 13.653339144628612 18.75467360603691 54.05423305857872 13.537754190755768 24 13.952022629867495 16.726061522815744 54.382827622453824 14.939088224862942 25 12.67930623389609 20.156007640144086 52.60354574472176 14.561140381238063 26 13.014523965183505 18.666435924060043 53.81729458566746 14.501745525088985 27 14.916654915885774 18.927730561003646 52.94325013780461 13.21236438530597 28 11.821499228721473 19.757122041473846 54.3039905651912 14.117388164613484 29 14.435513850965915 17.232840655138084 53.98800138445564 14.343644109440365 30 15.755019719946844 18.449794254509094 52.023484469740666 13.77170155580339 31 14.821366765373226 20.45618667931478 48.99926076905656 15.723185786255431 32 17.427903617958613 21.25224867216176 47.49024685185898 13.829600858020655 33 17.32556499891038 21.728048473039436 44.89567443072808 16.050712097322105 34 15.860135796297008 23.006747084738084 43.56334952804591 17.569767590918996 35 17.575322505522866 24.2068222897358 41.05594653608344 17.16190866865789 36 17.47917975276357 25.94871531917257 40.816871557555324 15.755233370508531 37 18.47393676797976 25.6380674024792 39.73473146260901 16.15326436693202 38 18.170766620945447 26.563815286270387 37.83046400628987 17.434954086494294 39 19.7528490302401 23.827806193302482 38.97648561918069 17.442859157276725 40 19.010840629500013 23.95172351908113 39.74990065248882 17.287535198930037 41 16.664743811611483 25.567990018245755 38.724591606951336 19.04267456319143 42 18.15687933443577 25.7459609361313 38.85427749789554 17.242882231537386 43 19.23346451477821 25.280202711652926 38.10073196682434 17.385600806744524 44 18.83137415768266 24.937720861268144 37.50528785140176 18.725617129647436 45 18.51901703649579 23.834643011276476 36.98675793818662 20.659582014041113 46 19.34926311921274 25.150516820708724 37.30552457622411 18.194695483854428 47 16.673289834078975 24.61938152435403 40.493831908284086 18.21349673328291 48 17.151012490011837 23.57527122938806 39.27089609318583 20.002820187414272 49 17.634503711110256 22.37690522888385 41.47662449204579 18.511966567960105 50 16.969409512577606 22.299777376114722 40.054139052331564 20.6766740589761 51 16.383152371307585 21.847265486460966 38.95042025065484 22.819161891576613 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 93.0 1 201.5 2 310.0 3 23856.0 4 47402.0 5 31814.0 6 16226.0 7 15661.5 8 15097.0 9 14898.5 10 14700.0 11 14047.0 12 13394.0 13 12824.0 14 12254.0 15 11399.0 16 10544.0 17 9857.0 18 9170.0 19 8536.5 20 7903.0 21 7103.0 22 6303.0 23 5772.5 24 5242.0 25 5130.0 26 5248.0 27 5478.0 28 5795.0 29 6112.0 30 6658.0 31 7204.0 32 7983.5 33 8763.0 34 10031.5 35 11300.0 36 11873.5 37 12447.0 38 13047.5 39 13648.0 40 14878.5 41 16109.0 42 17728.0 43 19347.0 44 20681.5 45 22016.0 46 28514.0 47 35012.0 48 33780.5 49 32549.0 50 31242.0 51 29935.0 52 25726.5 53 21518.0 54 18874.5 55 16231.0 56 14390.0 57 12549.0 58 11410.5 59 10272.0 60 9589.5 61 8907.0 62 7911.5 63 6916.0 64 5377.0 65 3838.0 66 2951.5 67 2065.0 68 1447.5 69 830.0 70 622.5 71 415.0 72 435.0 73 455.0 74 341.5 75 187.5 76 147.0 77 104.0 78 61.0 79 42.5 80 24.0 81 22.0 82 20.0 83 11.0 84 2.0 85 1.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 468054.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.588415711361534 #Duplication Level Percentage of deduplicated Percentage of total 1 80.12158149564004 34.9237280168369 2 7.885062843649328 6.873947942783949 3 2.742269776087352 3.585935849783934 4 1.4792751851584531 2.579170468887519 5 1.0312961895891644 2.2476283516677804 6 0.8082642245209668 2.1138574213824692 7 0.6763531674757178 2.0636814122139397 8 0.5828679900792306 2.0325033805135404 9 0.5196699591805192 2.0386431192120074 >10 4.023399296548573 28.105981413736153 >50 0.09586393605210759 2.8808351115413666 >100 0.029154496015844175 2.438209604683793 >500 0.002470720001342727 0.6653382923028478 >1k 0.0019765760010741814 1.6572071288371997 >5k 0.0 0.0 >10k+ 4.941440002685453E-4 5.793332485616606 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26897 5.746559157704026 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGC 2255 0.48178201660492165 No Hit GAATCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTC 2175 0.46468997166993553 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCG 1889 0.40358591102736013 No Hit GCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC 1375 0.2937695223200742 No Hit CCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC 756 0.16151982463561898 No Hit CTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGCT 695 0.14848714037269203 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 603 0.128831288697458 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGAGGCATT 525 0.11216654488584651 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 510 0.1089617864605366 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 500 0.10682528084366334 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCT 474 0.10127036623979284 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.15575125947006116 0.0 2 0.0 0.0 0.0 0.79200263217492 0.0 3 0.0 0.0 0.0 1.0932499241540505 0.0 4 0.0 0.0 0.0 1.541488802574062 0.0 5 0.0 0.0 0.0 2.936626970392305 0.0 6 0.0 0.0 0.0 3.4508838723737005 0.0 7 0.0 0.0 0.0 4.080939378789627 0.0 8 0.0 0.0 0.0 5.000064095168506 0.0 9 0.0 0.0 0.0 5.306011699504758 0.0 10 0.0 0.0 0.0 6.368709593337521 0.0 11 0.0 0.0 0.0 7.332914578232426 0.0 12 0.0 0.0 0.0 8.677631213492461 0.0 13 0.0 0.0 0.0 9.016908305451935 0.0 14 0.0 0.0 0.0 9.158558627850633 0.0 15 0.0 0.0 0.0 9.459805919829764 0.0 16 0.0 0.0 0.0 9.949706657778803 0.0 17 0.0 0.0 0.0 10.595999606882966 0.0 18 0.0 0.0 0.0 11.212167826789216 0.0 19 0.0 0.0 0.0 11.759113264708773 0.0 20 0.0 0.0 0.0 12.170390595956876 0.0 21 0.0 0.0 0.0 12.623543437295696 0.0 22 0.0 0.0 0.0 13.183094258354805 0.0 23 0.0 0.0 0.0 13.668081033385036 0.0 24 0.0 0.0 0.0 14.034491746678802 0.0 25 0.0 0.0 0.0 14.350480927414358 0.0 26 0.0 0.0 0.0 14.64531870254287 0.0 27 0.0 0.0 0.0 14.96323073833361 0.0 28 0.0 0.0 0.0 15.277938015699043 0.0 29 0.0 0.0 0.0 15.631316044729882 0.0 30 0.0 0.0 0.0 16.02635593328975 0.0 31 0.0 0.0 0.0 16.397680609502324 0.0 32 0.0 0.0 0.0 16.731402786857927 0.0 33 0.0 0.0 0.0 17.073457336119336 0.0 34 0.0 0.0 0.0 17.382182397757525 0.0 35 0.0 0.0 0.0 17.734492173979927 0.0 36 2.1365056168732668E-4 0.0 0.0 18.090006708627637 0.0 37 2.1365056168732668E-4 0.0 0.0 18.42864284890205 0.0 38 2.1365056168732668E-4 0.0 0.0 18.763433279066092 0.0 39 2.1365056168732668E-4 0.0 0.0 19.08882308451589 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTTGCG 20 7.0289953E-4 45.000004 1 TAAACGA 20 7.0289953E-4 45.000004 27 TCGTGAG 20 7.0289953E-4 45.000004 1 AATTGCG 20 7.0289953E-4 45.000004 1 CATAGCC 20 7.0289953E-4 45.000004 10 GTTCACG 20 7.0289953E-4 45.000004 1 GTATACG 20 7.0289953E-4 45.000004 1 TGCTACG 20 7.0289953E-4 45.000004 1 CGGTCCT 20 7.0289953E-4 45.000004 38 CCAACGG 20 7.0289953E-4 45.000004 2 TGCGTAA 20 7.0289953E-4 45.000004 11 TGGCGTT 25 3.8872502E-5 45.0 35 TTCGTAG 25 3.8872502E-5 45.0 1 TCGGCGT 25 3.8872502E-5 45.0 4 ACAACGA 60 0.0 44.999996 13 AGCGTTG 30 2.1627347E-6 44.999996 1 ACGCCGG 30 2.1627347E-6 44.999996 27 TATGACG 30 2.1627347E-6 44.999996 1 GCTACGA 30 2.1627347E-6 44.999996 10 CGGTAGT 30 2.1627347E-6 44.999996 12 >>END_MODULE