##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935656.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 543539 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.40708946368154 34.0 31.0 34.0 30.0 34.0 2 32.61250986589739 34.0 31.0 34.0 31.0 34.0 3 32.46496203584287 34.0 31.0 34.0 31.0 34.0 4 36.06440200243221 37.0 35.0 37.0 35.0 37.0 5 36.1048241248558 37.0 35.0 37.0 35.0 37.0 6 36.12803681060605 37.0 36.0 37.0 35.0 37.0 7 36.25623368332355 37.0 37.0 37.0 35.0 37.0 8 36.01575967869831 37.0 37.0 37.0 35.0 37.0 9 37.82963136039916 39.0 38.0 39.0 35.0 39.0 10 37.62481809033022 39.0 38.0 39.0 35.0 39.0 11 37.6464154366108 39.0 37.0 39.0 35.0 39.0 12 37.61252642404685 39.0 37.0 39.0 35.0 39.0 13 37.641194100147366 39.0 38.0 39.0 35.0 39.0 14 39.07011272420194 41.0 39.0 41.0 35.0 41.0 15 39.167095645390674 41.0 39.0 41.0 35.0 41.0 16 39.199707840651726 41.0 39.0 41.0 35.0 41.0 17 39.15881841045445 41.0 39.0 41.0 35.0 41.0 18 38.50099624865925 39.0 39.0 41.0 35.0 41.0 19 37.80373809423059 37.0 37.0 41.0 35.0 41.0 20 36.99986017562677 37.0 35.0 41.0 34.0 41.0 21 36.96724798036571 36.0 35.0 40.0 34.0 41.0 22 36.957815354555976 36.0 35.0 40.0 34.0 41.0 23 36.954424613505196 36.0 35.0 40.0 34.0 41.0 24 36.790596442941535 36.0 35.0 40.0 34.0 41.0 25 36.68692586916486 36.0 35.0 40.0 33.0 41.0 26 36.52901447734201 35.0 35.0 40.0 33.0 41.0 27 36.444144762381356 35.0 35.0 40.0 33.0 41.0 28 36.28679082825703 35.0 35.0 40.0 33.0 41.0 29 36.00974355106074 35.0 35.0 40.0 33.0 41.0 30 35.467846833437896 35.0 35.0 40.0 31.0 41.0 31 34.776555132198425 35.0 35.0 40.0 23.0 41.0 32 33.70589046968111 35.0 33.0 40.0 17.0 41.0 33 32.46868945926603 35.0 32.0 40.0 12.0 41.0 34 31.447861147038207 35.0 27.0 40.0 7.0 41.0 35 30.827223069549746 35.0 23.0 40.0 7.0 41.0 36 30.441368512655025 35.0 21.0 40.0 7.0 41.0 37 30.249663777576217 35.0 21.0 40.0 7.0 41.0 38 30.091522411455294 35.0 20.0 40.0 7.0 41.0 39 29.958341535749966 35.0 20.0 40.0 7.0 41.0 40 29.844993643510403 35.0 19.0 40.0 7.0 41.0 41 29.670340122787877 35.0 18.0 40.0 7.0 41.0 42 29.53920141884943 35.0 18.0 40.0 7.0 41.0 43 29.43512609030815 35.0 18.0 40.0 7.0 41.0 44 29.331479433858473 35.0 18.0 40.0 7.0 41.0 45 29.273426561847447 35.0 18.0 40.0 7.0 41.0 46 29.222079740368216 35.0 18.0 40.0 7.0 41.0 47 29.203024989927126 35.0 18.0 40.0 7.0 41.0 48 29.128169275801735 35.0 18.0 40.0 7.0 41.0 49 29.08816110711467 35.0 18.0 40.0 7.0 41.0 50 28.976535262419073 35.0 18.0 40.0 7.0 41.0 51 28.38730431486977 35.0 18.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 14.0 10 17.0 11 7.0 12 4.0 13 13.0 14 18.0 15 27.0 16 66.0 17 113.0 18 317.0 19 569.0 20 967.0 21 1587.0 22 2492.0 23 4453.0 24 8906.0 25 17888.0 26 30786.0 27 36585.0 28 32136.0 29 24313.0 30 18260.0 31 15013.0 32 13969.0 33 15058.0 34 22903.0 35 31962.0 36 33479.0 37 36676.0 38 66150.0 39 128668.0 40 120.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.38007576273276 13.069715328614873 14.792682769773648 45.75752613887872 2 58.94038882214524 14.975374352162401 15.230921792180505 10.853315033511855 3 20.847630068863506 15.195965698873493 53.05323077092904 10.90317346133396 4 18.728554896704743 16.65676244022968 52.72611532935079 11.888567333714784 5 16.042455095218557 19.766750867923 51.82516801922217 12.36562601763627 6 16.836142392726188 21.803219272214136 52.09819350589379 9.262444829165892 7 50.05767755395657 4.504368591766184 42.13184334518774 3.306110509089504 8 50.457832832602634 3.9515103792000206 42.17636636929456 3.414290418902784 9 46.723786149659915 5.464189322201351 43.36708129499447 4.444943233144264 10 25.299196561792254 15.839893733476346 48.90081484493293 9.960094859798469 11 19.555910431450183 16.81627261337273 51.24544880864115 12.382368146535944 12 17.948482077643003 14.651018602161022 54.528009949608034 12.872489370587942 13 16.200125473977028 14.78201196234309 55.407431665437066 13.610430898242813 14 13.398486585139244 17.844901653791172 54.654587803267106 14.102023957802476 15 13.381560476801113 16.97762258090036 56.924526114961395 12.716290827337136 16 14.816048158457813 15.92783590505925 56.19688743586016 13.05922850062277 17 14.726266192490328 15.620222283957544 54.38340211098007 15.27010941257205 18 14.628389131230692 16.691718533536694 54.837279385655854 13.842612949576754 19 16.060853039064355 17.437387197606796 53.19379106191092 13.30796870141793 20 16.53791172298584 16.754823480927772 53.60535306574137 13.101911730345018 21 16.13610062939366 16.984797779000218 53.8117779956912 13.067323595914921 22 14.7557029026436 16.30554569221344 53.49662121761271 15.442130187530243 23 14.59012140803144 17.060229348767983 54.217452657490995 14.13219658570958 24 14.931771225247866 16.227722389745722 54.35470131858063 14.485805066425778 25 14.559580821247417 17.112295529851586 53.19452697966476 15.133596669236246 26 14.156849830462948 17.513186726251472 53.820241049860265 14.509722393425312 27 14.933794999070905 17.2640785665794 53.79098831914545 14.011138115204243 28 13.650722395265106 17.32221606913211 54.57566062416864 14.451400911434137 29 15.14224370284377 16.789963553673243 53.421005668406494 14.646787075076489 30 15.119246273036527 16.763654493973753 52.320808626427905 15.796290606561811 31 14.84419701254188 18.07597982849437 51.13174951567413 15.948073643289625 32 16.269301742837218 19.34433407722353 49.21468376694221 15.171680412997043 33 16.208588528146095 20.52088258616217 46.45738392277279 16.813144962918944 34 15.970335155343038 22.230419528313515 44.908461030395245 16.8907842859482 35 17.533608443920308 22.701038931888974 41.75137386645669 18.013978757734037 36 17.738561538362475 24.385922629286952 40.25838072337036 17.61713510898022 37 17.647123757448867 24.88873843459255 41.05887526010093 16.405262547857653 38 18.072116260286748 24.70144736624235 39.28402561729701 17.942410756173892 39 18.167233629969516 23.7778705851834 39.89722908567738 18.1576666991697 40 18.805090343103252 23.669874654808577 40.099238509104225 17.425796492983945 41 17.93965106459702 24.46429787007004 38.99738565217951 18.598665413153427 42 18.38598518229603 24.71782153626511 38.84762638927474 18.048566892164132 43 18.08113125277119 24.07518135773146 39.2919367331507 18.55175065634665 44 17.96393635047347 24.03286608688613 38.642121356517194 19.361076206123204 45 17.93339576368945 23.043608646297688 39.220736690467476 19.802258899545386 46 17.777749158754016 23.52471487786525 39.32339721712702 19.37413874625372 47 17.41880527432254 22.874531542354827 41.53262231413017 18.17404086919246 48 17.649515490148822 21.824376907636804 41.2187533921209 19.30735421009348 49 17.16399375205827 21.4047198085142 42.11270948358811 19.318576955839415 50 16.37104237230447 21.502228910896918 42.234135912970366 19.892592803828244 51 16.41427754034209 21.464329146574578 40.5404212025264 21.580972110556925 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 109.0 1 310.0 2 511.0 3 29302.0 4 58093.0 5 39794.5 6 21496.0 7 20510.0 8 19524.0 9 18790.0 10 18056.0 11 17345.5 12 16635.0 13 15830.0 14 15025.0 15 14025.0 16 13025.0 17 12133.5 18 11242.0 19 10315.0 20 9388.0 21 8509.5 22 7631.0 23 6879.0 24 6127.0 25 5993.5 26 5610.5 27 5361.0 28 5556.0 29 5751.0 30 6061.5 31 6372.0 32 6831.0 33 7290.0 34 7924.0 35 8558.0 36 9502.5 37 10447.0 38 11301.5 39 12156.0 40 13844.5 41 15533.0 42 17086.5 43 18640.0 44 20607.5 45 22575.0 46 25982.5 47 29390.0 48 32027.5 49 34665.0 50 34012.5 51 33360.0 52 30017.0 53 26674.0 54 23453.5 55 20233.0 56 19059.5 57 17886.0 58 16950.0 59 16014.0 60 15110.5 61 14207.0 62 12997.5 63 11788.0 64 10157.5 65 8527.0 66 6846.0 67 5165.0 68 4340.5 69 3516.0 70 3107.0 71 2698.0 72 2215.0 73 1732.0 74 1368.5 75 830.5 76 656.0 77 490.5 78 325.0 79 235.5 80 146.0 81 124.5 82 103.0 83 72.0 84 41.0 85 21.5 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 543539.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.410319812805966 #Duplication Level Percentage of deduplicated Percentage of total 1 80.30924046157494 36.46868293283655 2 7.617830178243508 6.918562093473647 3 2.770883676826913 3.7748014178638147 4 1.5180963441492765 2.7574896197788075 5 1.087655076292891 2.469538243024103 6 0.8765497692894204 2.388264321316432 7 0.7100501303369745 2.25705224512086 8 0.610662857317231 2.218431651886189 9 0.5736882093999971 2.344622855552088 >10 3.8075163880563303 26.66113550893831 >50 0.07787176306993583 2.5266110568290907 >100 0.03710120648241531 2.6321410852468374 >500 0.0024462333944449653 0.7274166366979548 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 4.0770556574082757E-4 5.855250331435357 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31626 5.818533720671377 No Hit GCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 781 0.14368794143566516 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 745 0.13706468165117866 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 643 0.11829877892846695 No Hit CCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 636 0.11701092285926123 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 603 0.11093960139014865 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.198971922897897E-4 0.0 0.0 0.09438145192893242 0.0 2 9.198971922897897E-4 0.0 0.0 0.46344420547559606 0.0 3 0.0011038766307477476 0.0 0.0 0.6886350381481365 0.0 4 0.0011038766307477476 0.0 0.0 0.957980936050587 0.0 5 0.0011038766307477476 0.0 0.0 1.7032816412437746 0.0 6 0.0011038766307477476 0.0 0.0 2.146304129050537 0.0 7 0.0011038766307477476 0.0 0.0 2.585463048649683 0.0 8 0.0011038766307477476 0.0 0.0 3.3044546941433826 0.0 9 0.0011038766307477476 0.0 0.0 3.569201106084384 0.0 10 0.0014718355076636636 0.0 0.0 4.168054178265037 0.0 11 0.0014718355076636636 0.0 0.0 4.983451049510706 0.0 12 0.0014718355076636636 0.0 0.0 5.667486601697394 0.0 13 0.0014718355076636636 0.0 0.0 5.948607183661154 0.0 14 0.0014718355076636636 0.0 0.0 6.074633099004855 0.0 15 0.0014718355076636636 0.0 0.0 6.27333089253945 0.0 16 0.0014718355076636636 0.0 0.0 6.710466038315558 0.0 17 0.0014718355076636636 0.0 0.0 7.219721123967186 0.0 18 0.0014718355076636636 0.0 0.0 7.771107501025686 0.0 19 0.0014718355076636636 0.0 0.0 8.107421914526833 0.0 20 0.0014718355076636636 0.0 0.0 8.437297047681952 0.0 21 0.0014718355076636636 0.0 0.0 8.863945365465955 0.0 22 0.0014718355076636636 0.0 0.0 9.304576120572765 0.0 23 0.0014718355076636636 0.0 0.0 9.744838916802658 0.0 24 0.0014718355076636636 0.0 0.0 10.108382287195584 0.0 25 0.0014718355076636636 0.0 0.0 10.420227435381822 0.0 26 0.0014718355076636636 0.0 0.0 10.717906166806797 0.0 27 0.0014718355076636636 0.0 0.0 11.017976630931727 0.0 28 0.0014718355076636636 0.0 0.0 11.318966992248946 0.0 29 0.0014718355076636636 0.0 0.0 11.626396633912194 0.0 30 0.0014718355076636636 0.0 0.0 11.961423191344135 0.0 31 0.0014718355076636636 0.0 0.0 12.301785152491357 0.0 32 0.0014718355076636636 0.0 0.0 12.625956923054279 0.0 33 0.0014718355076636636 0.0 0.0 12.947369002040332 0.0 34 0.0014718355076636636 0.0 0.0 13.250751096057504 0.0 35 0.0014718355076636636 0.0 0.0 13.568483586274398 0.0 36 0.0014718355076636636 0.0 0.0 13.90443004089863 0.0 37 0.0016558149461216214 0.0 0.0 14.249207508568842 0.0 38 0.0016558149461216214 0.0 0.0 14.575035094077887 0.0 39 0.0016558149461216214 0.0 0.0 14.887984118894872 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCGG 30 2.1633823E-6 45.000004 2 TATACGG 30 2.1633823E-6 45.000004 2 GTTGACG 20 7.0300006E-4 45.0 1 CAACGAC 20 7.0300006E-4 45.0 12 GCCGGAT 20 7.0300006E-4 45.0 17 CGCGCAA 20 7.0300006E-4 45.0 18 TCGTGCG 20 7.0300006E-4 45.0 1 CGTGTTG 20 7.0300006E-4 45.0 30 GCAATCG 25 3.8880833E-5 45.0 21 GTGCGAA 20 7.0300006E-4 45.0 9 GCGTACG 25 3.8880833E-5 45.0 1 CGTTTTT 20770 0.0 44.393356 1 GTTTTTT 23205 0.0 39.909504 2 TACGGCA 40 3.4537334E-7 39.375 41 TAGGGTC 80 0.0 39.375 5 TACGGGA 75 0.0 39.0 4 GCGTTAG 35 6.242213E-6 38.571426 1 GCTCGTA 65 9.094947E-12 38.076927 32 AGTACGG 65 9.094947E-12 38.076927 2 CTCGTAC 60 1.546141E-10 37.500004 29 >>END_MODULE