##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935655.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 373804 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.37721907737745 33.0 31.0 34.0 30.0 34.0 2 32.58117890659276 34.0 31.0 34.0 31.0 34.0 3 32.42748873741319 34.0 31.0 34.0 30.0 34.0 4 36.05120062920675 37.0 35.0 37.0 35.0 37.0 5 36.08153738322758 37.0 35.0 37.0 35.0 37.0 6 36.10243871119624 37.0 36.0 37.0 35.0 37.0 7 36.24778226022193 37.0 37.0 37.0 35.0 37.0 8 35.993852393232814 37.0 37.0 37.0 35.0 37.0 9 37.82466747279323 39.0 38.0 39.0 35.0 39.0 10 37.65378647633519 39.0 38.0 39.0 35.0 39.0 11 37.65300531829515 39.0 37.0 39.0 35.0 39.0 12 37.58042717573916 39.0 37.0 39.0 35.0 39.0 13 37.57142780708607 39.0 37.0 39.0 35.0 39.0 14 38.9783496163765 41.0 39.0 41.0 35.0 41.0 15 39.065435361847385 41.0 39.0 41.0 35.0 41.0 16 39.11414270580304 41.0 39.0 41.0 35.0 41.0 17 39.06495382606928 41.0 39.0 41.0 35.0 41.0 18 38.41317909920707 39.0 38.0 40.0 35.0 41.0 19 37.7231998587495 37.0 37.0 40.0 35.0 41.0 20 36.85598602476164 36.0 35.0 40.0 34.0 41.0 21 36.83934628842923 36.0 35.0 40.0 34.0 41.0 22 36.8175835464575 35.0 35.0 40.0 34.0 41.0 23 36.82473435276241 35.0 35.0 40.0 34.0 41.0 24 36.65303474548159 35.0 35.0 40.0 34.0 41.0 25 36.57508747899969 35.0 35.0 40.0 33.0 41.0 26 36.43099057259954 35.0 35.0 40.0 33.0 41.0 27 36.33733721415501 35.0 35.0 40.0 33.0 41.0 28 36.20188922536944 35.0 35.0 40.0 33.0 41.0 29 35.96440915560026 35.0 35.0 40.0 33.0 41.0 30 35.4647328546511 35.0 35.0 40.0 31.0 41.0 31 34.857369102524316 35.0 35.0 40.0 25.0 41.0 32 33.85630972381248 35.0 34.0 40.0 18.0 41.0 33 32.74458807289382 35.0 33.0 40.0 12.0 41.0 34 31.794539384276252 35.0 31.0 40.0 8.0 41.0 35 31.200457994028955 35.0 26.0 40.0 7.0 41.0 36 30.83523183272517 35.0 23.0 40.0 7.0 41.0 37 30.65735251629196 35.0 23.0 40.0 7.0 41.0 38 30.49410653711571 35.0 23.0 40.0 7.0 41.0 39 30.35022632181571 35.0 22.0 40.0 7.0 41.0 40 30.20530010379771 35.0 22.0 40.0 7.0 41.0 41 30.036920418187073 35.0 21.0 40.0 7.0 41.0 42 29.898858760205883 35.0 21.0 40.0 7.0 41.0 43 29.77219077377449 35.0 20.0 40.0 7.0 41.0 44 29.663647258991343 35.0 20.0 40.0 7.0 41.0 45 29.61036264994489 35.0 20.0 40.0 7.0 41.0 46 29.599710008453627 35.0 20.0 40.0 7.0 41.0 47 29.637095911226204 35.0 20.0 40.0 7.0 41.0 48 29.620180629420766 35.0 20.0 40.0 7.0 41.0 49 29.613530085285337 35.0 20.0 40.0 7.0 41.0 50 29.467787931643322 35.0 20.0 40.0 7.0 41.0 51 28.832770649859285 35.0 20.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 3.0 8 8.0 9 5.0 10 4.0 11 5.0 12 3.0 13 12.0 14 10.0 15 27.0 16 46.0 17 90.0 18 156.0 19 384.0 20 640.0 21 1056.0 22 1654.0 23 2785.0 24 5280.0 25 10809.0 26 18208.0 27 23624.0 28 21493.0 29 16578.0 30 12584.0 31 10693.0 32 10346.0 33 11340.0 34 17483.0 35 27567.0 36 28856.0 37 24958.0 38 44923.0 39 82086.0 40 87.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.994638901670392 12.560860771955356 15.114873035066505 46.329627291307744 2 57.98386320103583 16.270558902526457 15.030604273897548 10.714973622540155 3 19.942536730479073 16.011332141978148 53.49808990808017 10.548041219462606 4 18.51077035023702 15.488330782977174 54.34933815582498 11.651560710960824 5 16.026313255074854 18.745385282126463 52.542241388535174 12.686060074263516 6 15.976019518250206 21.94037516987512 52.26589335587634 9.81771195599833 7 49.20519844624456 3.9592941755572437 43.65442852403933 3.181078854158864 8 49.44543129554526 4.433874436870659 42.55411927106184 3.5665749965222417 9 45.73546564509743 4.715572867064023 43.88877593605205 5.660185551786498 10 25.94140244620175 14.396047126301484 48.96657071620422 10.695979711292548 11 19.31065478165028 16.061625878802797 51.6495275598977 12.97819177964923 12 17.31361890188441 13.753464382403614 54.6824004023499 14.250516313362082 13 15.776717210088709 15.04264266835026 55.69870841403516 13.481931707525868 14 13.255609891814963 17.615648842709014 55.06227862730201 14.066462638174016 15 13.193545280414334 15.344405089298135 57.51623845651732 13.945811173770212 16 13.916116467453532 15.409679939219483 55.584477426672805 15.089726166654183 17 13.662507624316486 15.587045617489379 54.74259237461343 16.0078543835807 18 14.11862901413575 15.633326556163125 55.74044151480455 14.507602914896578 19 15.279397759253513 16.2002011749473 54.12007362147008 14.400327444329115 20 15.304277107789108 16.29945104921296 54.965436431926896 13.430835411071044 21 15.361258841531924 16.67692159527453 54.72386598324256 13.23795357995099 22 13.895249917068838 14.75639640025254 55.065221345946 16.28313233673262 23 14.330772276380136 15.927063380809194 54.78058019710864 14.961584145702025 24 14.890423858492685 15.224823704401235 54.82686113578239 15.05789130132369 25 14.196209778386534 16.9527345881799 53.732169800216155 15.118885833217407 26 13.657424746658679 16.5709837240907 53.759456827642296 16.01213470160833 27 14.24489839595082 16.961027704358433 53.94832586061145 14.845748039079304 28 13.090817647751226 16.476549207606126 55.50047618538058 14.932156959262075 29 14.621031342628758 15.95542048774224 54.203004783255395 15.220543386373608 30 14.102310301655413 17.166215449807922 53.326877186975 15.404597061561672 31 15.500904217183336 17.557329509582562 50.974307391039154 15.967458882194945 32 16.137869043669944 19.246450011235837 49.261110100480465 15.354570844613754 33 15.999026227648713 19.52868348118265 46.92994189468278 17.54234839648586 34 15.682282693604135 20.73305796620689 45.49362767653637 18.09103166365261 35 16.983231854126764 21.229574857411908 43.24405303314036 18.54314025532097 36 18.37620785224342 22.661608757530686 41.771623631635826 17.190559758590062 37 17.129030186942888 23.686744925147938 41.734438368770796 17.44978651913837 38 16.866860707750586 24.645001123583484 40.77297193181453 17.7151662368514 39 17.667815218670746 23.659190377845075 40.30427710778911 18.36871729569507 40 17.61083348492793 22.881777616076874 41.31898000021402 18.18840889878118 41 16.823790007597562 23.893805309734514 39.29626221228237 19.98614247038555 42 17.72934479031792 23.93794608939444 39.6552738868498 18.677435233437844 43 18.62259365870884 23.272356636098063 39.65901916512397 18.446030540069128 44 17.31281634225423 23.24239440990466 40.26093888775936 19.183850360081752 45 17.136253223614514 22.53346673657853 40.34146237065414 19.988817669152816 46 17.966634920974627 22.482102920246973 41.3746241345732 18.1766380242052 47 15.964516163550952 22.417630629955806 43.60252966795433 18.01532353853891 48 16.459962975249063 21.597147168034585 42.975463076906614 18.967426779809742 49 16.929460358904667 20.483996960974203 43.933719275342156 18.652823404778974 50 16.465313372783598 20.398925640175065 43.968229339439915 19.167531647601415 51 15.724818354003704 20.766497950797742 42.131170345956704 21.37751334924185 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 107.0 1 218.0 2 329.0 3 25049.5 4 49770.0 5 32110.0 6 14450.0 7 13788.5 8 13127.0 9 12718.5 10 12310.0 11 11799.5 12 11289.0 13 10430.5 14 9572.0 15 8817.5 16 8063.0 17 7218.0 18 6373.0 19 5752.5 20 5132.0 21 4670.5 22 4209.0 23 3857.5 24 3506.0 25 3389.5 26 3201.0 27 3129.0 28 3175.0 29 3221.0 30 3398.5 31 3576.0 32 3785.0 33 3994.0 34 4687.0 35 5380.0 36 5747.5 37 6115.0 38 6417.5 39 6720.0 40 7743.0 41 8766.0 42 10307.0 43 11848.0 44 14001.5 45 16155.0 46 19512.5 47 22870.0 48 24119.0 49 25368.0 50 24611.0 51 23854.0 52 20742.0 53 17630.0 54 16289.0 55 14948.0 56 13565.0 57 12182.0 58 11223.5 59 10265.0 60 9903.5 61 9542.0 62 8638.5 63 7735.0 64 6801.5 65 5868.0 66 5131.0 67 4394.0 68 3709.5 69 3025.0 70 2752.5 71 2480.0 72 1968.0 73 1456.0 74 1177.0 75 669.5 76 441.0 77 323.5 78 206.0 79 159.0 80 112.0 81 93.5 82 75.0 83 49.0 84 23.0 85 14.0 86 5.0 87 4.0 88 3.0 89 2.0 90 1.0 91 2.0 92 3.0 93 4.5 94 6.0 95 3.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 373804.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.0204990326639 #Duplication Level Percentage of deduplicated Percentage of total 1 80.46578975374308 34.61678430263441 2 7.69557241006462 6.6213473084596 3 2.6564384897535382 3.4284392843631974 4 1.4280528662749068 2.457421878086902 5 0.9525551207444376 2.0489698325272565 6 0.7589947578925479 1.9591399948627999 7 0.6513306682658041 1.9614399268851352 8 0.5923144250465718 2.038532971979914 9 0.507656682224561 1.965567942591038 >10 4.182040452229095 28.56060175294644 >50 0.07785943877213454 2.2631085407392524 >100 0.02699964409033698 2.265539667125819 >500 0.003767392198651672 1.2631052203982747 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 6.278986997752786E-4 8.550001376399955 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31652 8.467539138157964 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGC 993 0.26564723758975295 No Hit GCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 879 0.23514997164289306 TruSeq Adapter, Index 13 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTC 842 0.22525173620399994 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCG 767 0.2051877454494869 No Hit CCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 656 0.17549303913280756 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 539 0.1441932135557672 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 483 0.12921210045906412 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 483 0.12921210045906412 No Hit CTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGCT 479 0.12814202095215677 TruSeq Adapter, Index 19 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA 385 0.10299515253983371 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.350397534536816E-4 0.0 0.0 0.13188729922633252 0.0 2 5.350397534536816E-4 0.0 0.0 0.7043798354217718 0.0 3 5.350397534536816E-4 0.0 0.0 0.9638741158468074 0.0 4 5.350397534536816E-4 0.0 0.0 1.283827888412109 0.0 5 5.350397534536816E-4 0.0 0.0 2.258670319204717 0.0 6 5.350397534536816E-4 0.0 0.0 2.7011481953109118 0.0 7 5.350397534536816E-4 0.0 0.0 3.1973975666392014 0.0 8 5.350397534536816E-4 0.0 0.0 3.9279943499802035 0.0 9 5.350397534536816E-4 0.0 0.0 4.180265593733615 0.0 10 5.350397534536816E-4 0.0 0.0 4.959550994638902 0.0 11 5.350397534536816E-4 0.0 0.0 5.839691389070208 0.0 12 5.350397534536816E-4 0.0 0.0 6.797412547752298 0.0 13 5.350397534536816E-4 0.0 0.0 7.098104889193267 0.0 14 5.350397534536816E-4 0.0 0.0 7.229189628789419 0.0 15 5.350397534536816E-4 0.0 0.0 7.472632716610844 0.0 16 5.350397534536816E-4 0.0 0.0 7.957111213363153 0.0 17 5.350397534536816E-4 0.0 0.0 8.487335609035751 0.0 18 5.350397534536816E-4 0.0 0.0 9.07775197697189 0.0 19 5.350397534536816E-4 0.0 0.0 9.486522348610501 0.0 20 5.350397534536816E-4 0.0 0.0 9.848476741821917 0.0 21 8.025596301805225E-4 0.0 0.0 10.276508544584862 0.0 22 8.025596301805225E-4 0.0 0.0 10.737712812061936 0.0 23 8.025596301805225E-4 0.0 0.0 11.156381419139443 0.0 24 8.025596301805225E-4 0.0 0.0 11.515125573830135 0.0 25 8.025596301805225E-4 0.0 0.0 11.836951985532526 0.0 26 8.025596301805225E-4 0.0 0.0 12.128816171041509 0.0 27 0.0010700795069073631 0.0 0.0 12.427368353468662 0.0 28 0.0013375993836342041 0.0 0.0 12.740634129115794 0.0 29 0.0013375993836342041 0.0 0.0 13.032765834501504 0.0 30 0.0013375993836342041 0.0 0.0 13.366363120779875 0.0 31 0.0013375993836342041 0.0 0.0 13.672138339878654 0.0 32 0.0013375993836342041 0.0 0.0 13.996372430471585 0.0 33 0.0013375993836342041 0.0 0.0 14.297064771912552 0.0 34 0.0013375993836342041 0.0 0.0 14.585183679147361 0.0 35 0.0013375993836342041 0.0 0.0 14.907277610726476 0.0 36 0.0013375993836342041 0.0 0.0 15.201549475126003 0.0 37 0.0013375993836342041 0.0 0.0 15.50491701533424 0.0 38 0.0013375993836342041 0.0 0.0 15.793035922569047 0.0 39 0.0013375993836342041 0.0 0.0 16.098276101914372 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCTCGT 30 2.1615579E-6 45.000004 14 CGTATGG 35 1.2089913E-7 45.000004 2 TCCTCGC 30 2.1615579E-6 45.000004 39 ATATCGG 30 2.1615579E-6 45.000004 2 AACATAC 25 3.8857375E-5 45.000004 16 CATACGA 25 3.8857375E-5 45.000004 18 GACGAGG 35 1.2089913E-7 45.000004 2 AGGGCGC 55 1.8189894E-12 45.000004 6 TCGACAA 25 3.8857375E-5 45.000004 19 CGAGTAG 20 7.027173E-4 45.0 1 TAGAACG 20 7.027173E-4 45.0 1 GTAGGGT 95 0.0 45.0 4 CGACAAT 20 7.027173E-4 45.0 20 AATGCGG 20 7.027173E-4 45.0 2 GTATACG 20 7.027173E-4 45.0 1 CGTAAAT 20 7.027173E-4 45.0 16 GGCGAAC 20 7.027173E-4 45.0 32 CGAAGCC 20 7.027173E-4 45.0 12 CGTTTTT 13950 0.0 44.451614 1 AAGGGCG 100 0.0 40.500004 5 >>END_MODULE